FC923622
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923622 vs. ExPASy Swiss-Prot
Match: TLP2_ARATH (Tubby-like F-box protein 2 OS=Arabidopsis thaliana GN=TULP2 PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 6.988e-45 Identity = 92/189 (48.68%), Postives = 127/189 (67.20%), Query Frame = 2 Query: 161 MTIKSIIHDMM-------------WRRSHRVVGDAADHDMAGGSSPTCCWANLPQELLREILAKIEAADSAWPSRRSVVACAGVCRSWRRITKEIVKVPELSGYLTFPISVKQPGPRDYLLQCFIKRNRSTQTYHLYLSLTNALADDGKFLLAARKCRRATCTDYIISLHSDDXVKGSSTYLGELRSIF 688 M++KSI+ D+ W +S + D + + P WA+LP ELL +I+ ++E +++AWP+R +VV+CA VC+SWR IT EIV++PE G LTFPIS+KQPGPRD +QCFIKRNR+T TY LY L + ++ K LLAAR+ RRATCTD+IISL + + + SSTY+G+LRS F Sbjct: 1 MSLKSILRDLKEVRDGLGGISKRSWSKSSHIAPDQTTPPL--DNIPQSPWASLPPELLHDIIWRVEESETAWPARAAVVSCASVCKSWRGITMEIVRIPEQCGKLTFPISLKQPGPRDSPIQCFIKRNRATATYILYYGLMPSETENDKLLLAARRIRRATCTDFIISLSAKNFSRSSSTYVGKLRSGF 187
BLAST of FC923622 vs. ExPASy Swiss-Prot
Match: TLP7_ORYSJ (Tubby-like F-box protein 7 OS=Oryza sativa subsp. japonica GN=TULP7 PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.008e-43 Identity = 85/165 (51.52%), Postives = 119/165 (72.12%), Query Frame = 2 Query: 197 RRSHRVVGDAADHDMAGGSSPTCCWANLPQELLREILAKIEAADSAWPSRRSVVACAGVCRSWRRITKEIVKVPELSGYLTFPISVKQPGPRDYLLQCFIKRNRSTQTYHLYLSLTNALADD-GKFLLAARKCRRATCTDYIISLHSDDXVKGSSTYLGELRSIF 688 R + +G +++ D + WA LP ELLR+++ ++E DS WPSR+ VVACA VC +WR + K+IV+ PE G LTFP+S+KQPGPRD ++QCFIKR++S TYHLYL L++A+ D+ GKFLL+A++ RR T TDYIIS+ S + + SS Y+G+LRS F Sbjct: 32 RHRGKSIGPSSELDDTPVVAQQSKWAGLPPELLRDVMKRLEEDDSNWPSRKDVVACASVCTTWRDMCKDIVRNPEFCGKLTFPVSLKQPGPRDGVIQCFIKRDKSKLTYHLYLCLSSAVLDETGKFLLSAKRSRRTTHTDYIISMDSKNISRSSSGYIGKLRSNF 196
BLAST of FC923622 vs. ExPASy Swiss-Prot
Match: TLP3_ORYSJ (Tubby-like F-box protein 3 OS=Oryza sativa subsp. japonica GN=TULP3 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.116e-42 Identity = 82/145 (56.55%), Postives = 109/145 (75.17%), Query Frame = 2 Query: 257 PTCCWANLPQELLREILAKIEAADSAWPSRRSVVACAGVCRSWRRITKEIVKVPELSGYLTFPISVKQPGPRDYLLQCFIKRNRSTQTYHLYLSLTNAL-ADDGKFLLAARKCRRATCTDYIISLHSDDXVKGSSTYLGELRSIF 688 P WA+LP ELLRE++ ++EA +S WPSRR+VV A VCR+WR + KE V PE G LTFP+S+KQPGPRD ++QC+IKRNRS TYHLYL L+N + A+ GKF+LAA++ R+ TCT+Y IS+ S + + S T +G+LRS F Sbjct: 55 PESRWASLPPELLREVIRRLEADESTWPSRRNVVCFAAVCRTWREMCKETVLSPEFCGKLTFPVSIKQPGPRDGMIQCYIKRNRSKSTYHLYLCLSNVVTAEGGKFVLAAKRHRKTTCTEYTISMVSGNISRSSRTNIGKLRSNF 199
BLAST of FC923622 vs. ExPASy Swiss-Prot
Match: TLP12_ORYSJ (Tubby-like F-box protein 12 OS=Oryza sativa subsp. japonica GN=TULP12 PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.903e-42 Identity = 81/141 (57.45%), Postives = 112/141 (79.43%), Query Frame = 2 Query: 269 WANLPQELLREILAKIEAADSAWPSRRSVVACAGVCRSWRRITKEIVKVPELSGYLTFPISVKQPGPRDYLLQCFIKRNRSTQTYHLYLSLTNA-LADDGKFLLAARKCRRATCTDYIISLHSDDXVKGSSTYLGELRSIF 688 W LP ELLR+++ ++E +S WPSR+ VVACA VCR+WR I K+IV+ PE+ G LTFP+S+KQPGPRD L+QCFIKR++S TY+LYL L+ A L+++GKFLLAA++ RRAT T+YIIS+ S + + S+ Y+G++RS F Sbjct: 59 WVGLPPELLRDVMKRLEEGESNWPSRKDVVACAAVCRTWREICKDIVQSPEICGKLTFPVSLKQPGPRDGLIQCFIKRDKSKLTYYLYLCLSPAVLSENGKFLLAAKRNRRATSTEYIISVDSKNISRSSNGYVGKMRSNF 199
BLAST of FC923622 vs. ExPASy Swiss-Prot
Match: TLP6_ARATH (Tubby-like F-box protein 6 OS=Arabidopsis thaliana GN=TULP6 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.239e-42 Identity = 81/141 (57.45%), Postives = 107/141 (75.89%), Query Frame = 2 Query: 269 WANLPQELLREILAKIEAADSAWPSRRSVVACAGVCRSWRRITKEIVKVPELSGYLTFPISVKQPGPRDYLLQCFIKRNRSTQTYHLYLSLTNALA-DDGKFLLAARKCRRATCTDYIISLHSDDXVKGSSTYLGELRSIF 688 W +LP ELL +I+ +IE+ S WP RR VVACA VC+SWR +TKE+VKVPELSG +TFPIS++QPGPRD +QCFIKR R+T Y LYL L+ AL+ D K LL+A++ RRAT ++++SL +D + SS Y+G+LRS F Sbjct: 69 WVDLPPELLLDIIQRIESEQSLWPGRRDVVACASVCKSWREMTKEVVKVPELSGLITFPISLRQPGPRDAPIQCFIKRERATGIYRLYLGLSPALSGDKSKLLLSAKRVRRATGAEFVVSLSGNDFSRSSSNYIGKLRSNF 209
BLAST of FC923622 vs. ExPASy Swiss-Prot
Match: TLP10_ARATH (Tubby-like F-box protein 10 OS=Arabidopsis thaliana GN=TULP10 PE=1 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 5.537e-42 Identity = 80/144 (55.56%), Postives = 114/144 (79.17%), Query Frame = 2 Query: 260 TCCWANLPQELLREILAKIEAADSAWPSRRSVVACAGVCRSWRRITKEIVKVPELSGYLTFPISVKQPGPRDYLLQCFIKRNRSTQTYHLYLSLTNA-LADDGKFLLAARKCRRATCTDYIISLHSDDXVKGSSTYLGELRSIF 688 T WANLP ELL +++ ++E ++S WP+R+ VVACA VCRSWR + +EIV PE+ G LTFP+S+KQPGPRD ++QCFIKR++S T+HL+L L+ A L ++GKFLL+A++ RR T T+YIIS+ +D+ + S++YLG+LRS F Sbjct: 56 TSRWANLPPELLFDVIKRLEESESNWPARKHVVACASVCRSWRAMCQEIVLGPEICGKLTFPVSLKQPGPRDAMIQCFIKRDKSKLTFHLFLCLSPALLVENGKFLLSAKRTRRTTRTEYIISMDADNISRSSNSYLGKLRSNF 199
BLAST of FC923622 vs. ExPASy Swiss-Prot
Match: TLP5_ORYSJ (Tubby-like F-box protein 5 OS=Oryza sativa subsp. japonica GN=TULP5 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.611e-41 Identity = 80/141 (56.74%), Postives = 110/141 (78.01%), Query Frame = 2 Query: 269 WANLPQELLREILAKIEAADSAWPSRRSVVACAGVCRSWRRITKEIVKVPELSGYLTFPISVKQPGPRDYLLQCFIKRNRSTQTYHLYLSLTNAL-ADDGKFLLAARKCRRATCTDYIISLHSDDXVKGSSTYLGELRSIF 688 WANLP ELL +++ ++EA+++ WP+RR VVACA VCRSWR +TKE+VK E G +TFPIS+KQPGPR++ +QCF++R+R+T TY LYL L+ +L ++ K LLAARK RRAT T ++ISL S+D SSTY+G+L+ F Sbjct: 68 WANLPPELLLDVIQRVEASEATWPARRQVVACAAVCRSWREVTKEVVKTLEECGRITFPISLKQPGPREHPVQCFVRRDRATSTYLLYLGLSPSLHGENDKLLLAARKIRRATRTSFVISLVSNDFSLSSSTYVGKLKPNF 208
BLAST of FC923622 vs. ExPASy Swiss-Prot
Match: TLP1_ORYSJ (Tubby-like F-box protein 1 OS=Oryza sativa subsp. japonica GN=TULP1 PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.844e-38 Identity = 74/141 (52.48%), Postives = 102/141 (72.34%), Query Frame = 2 Query: 269 WANLPQELLREILAKIEAADSA-WPSRRSVVACAGVCRSWRRITKEIVKVPELSGYLTFPISVKQPGPRDYLLQCFIKRNRSTQTYHLYLSLTNALADDGKFLLAARKCRRATCTDYIISLHSDDXVKGSSTYLGELRSIF 688 WA L EL+ E++ ++EA+ WP+R+ VV+CA VCR WR +V+ P SG +TFP S+KQPGPR++ +QCFIKRN+ T++LYL LTNA D GKFL+AAR+ RR T+YI+SL +DD +GS+ Y+G+LRS F Sbjct: 34 WARLLPELMSEVVRRVEASGGERWPARKDVVSCACVCRRWRDAAVAVVRPPAESGKITFPSSLKQPGPREFPMQCFIKRNKKNSTFYLYLGLTNATVDKGKFLMAARRFRRGPHTEYIVSLDADDLSQGSNAYMGKLRSDF 174
BLAST of FC923622 vs. ExPASy Swiss-Prot
Match: TLP9_ORYSJ (Tubby-like F-box protein 9 OS=Oryza sativa subsp. japonica GN=TULP9 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.144e-37 Identity = 75/140 (53.57%), Postives = 95/140 (67.86%), Query Frame = 2 Query: 269 WANLPQELLREILAKIEAADSAWPSRRSVVACAGVCRSWRRITKEIVKVPELSGYLTFPISVKQPGPRDYLLQCFIKRNRSTQTYHLYLSLTNALADDGKFLLAARKCRRATCTDYIISLHSDDXVKGSSTYLGELRSIF 688 W+ L ELL EI+ +++A WP RR VVACA VCR WR +V+ P G +TFP S+KQPGPRD + CFI+RN+ T++LYLSLT AL D GKFLLAAR+ R T+YIIS DD GS++Y+G+LRS F Sbjct: 52 WSRLLPELLTEIMRRVDAGAERWPPRRDVVACACVCRRWRDAAVSVVRPPLECGRITFPSSLKQPGPRDAPMHCFIRRNKKNSTFYLYLSLTQALTDKGKFLLAARRFRNGAHTEYIISYDCDDLFPGSNSYVGKLRSDF 191
BLAST of FC923622 vs. ExPASy Swiss-Prot
Match: TLP2_ORYSJ (Tubby-like F-box protein 2 OS=Oryza sativa subsp. japonica GN=TULP2 PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.540e-36 Identity = 73/140 (52.14%), Postives = 93/140 (66.43%), Query Frame = 2 Query: 269 WANLPQELLREILAKIEAADSAWPSRRSVVACAGVCRSWRRITKEIVKVPELSGYLTFPISVKQPGPRDYLLQCFIKRNRSTQTYHLYLSLTNALADDGKFLLAARKCRRATCTDYIISLHSDDXVKGSSTYLGELRSIF 688 W+ L +LL +IL +EA WP RR VVACA VCR WR + +V+ P SG +TFP S+KQPGPRD +QCFIKRN+ T+ LYL LT L DD KFLLAAR+CRR +Y I+++SD GS + +G L+S F Sbjct: 51 WSALVPDLLADILRCVEAGSERWPPRRDVVACASVCRRWRDVAVAVVQPPLESGKITFPSSLKQPGPRDAPMQCFIKRNKKNSTFFLYLGLTQELTDDEKFLLAARRCRRGLHKEYAITINSDGLFHGSQSCVGNLKSNF 190 The following BLAST results are available for this feature:
BLAST of FC923622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923622 ID=FC923622; Name=FC923622; organism=Citrus clementina; type=EST; length=714bpback to top |