FC923627
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923627 vs. ExPASy Swiss-Prot
Match: RS3_THEON (30S ribosomal protein S3P OS=Thermococcus onnurineus (strain NA1) GN=rps3p PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.654e-28 Identity = 71/199 (35.68%), Postives = 106/199 (53.27%), Query Frame = 1 Query: 124 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMXXXXXXXXXXXQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQXPTTPLPD 720 +R F+ +GV ++E L +EL GY G++++ TP+ V+G GRRIRELT +++++F +E+ E++ N L A QA L L G+ RRA Y +R IM +GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GV+G+KV IM P LPD Sbjct: 4 ERYFIKEGVREMLIDEYLEKELRRAGYGGIDIKKTPLGTKVIIFAANPGYVIGRGGRRIRELTRILERQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGVHFRRAAYAAIRAIMRNGARGVEIRISGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVSIM---------PPDAKLPD 191
BLAST of FC923627 vs. ExPASy Swiss-Prot
Match: RS3_THEGJ (30S ribosomal protein S3P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rps3p PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.140e-28 Identity = 67/182 (36.81%), Postives = 102/182 (56.04%), Query Frame = 1 Query: 124 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMXXXXXXXXXXXQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIM 669 +R F+ +GV ++E L +EL GY G++++ TP+ V+G GRRIRELT +++++F +E+ E++ N L A QA L L G+ RRA Y +R IM +GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GV+G+KV IM Sbjct: 4 ERYFIKEGVKEMLIDEYLEKELRRAGYGGIDIKKTPLGTKVIIFAASPGYVIGRGGRRIRELTRILERQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGIHFRRAAYSAIRAIMRNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVAIM 183
BLAST of FC923627 vs. ExPASy Swiss-Prot
Match: RS3_THESM (30S ribosomal protein S3P OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rps3p PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.063e-27 Identity = 66/182 (36.26%), Postives = 101/182 (55.49%), Query Frame = 1 Query: 124 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMXXXXXXXXXXXQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIM 669 +R F+ +G+ ++E L +EL GY G++++ TP+ V+G GR+IRELT ++++RF +E+ E++ N A QA L L G+ RRA Y +R IM +GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GVLG+KV IM Sbjct: 4 ERYFIKEGIKEMLIDEYLEKELRRAGYGGLDIKKTPLGTKVVIFVERPGFVIGRGGRKIRELTRILERRFNLENPQIEV--EEIKNSYFNAKVQATRLAQALERGVHFRRAAYAAIRAIMSNGARGVEIRISGKLTGERAKSVRFYQGYIAKVGNPAETLVSRGYAQALLKLGVLGVKVSIM 183
BLAST of FC923627 vs. ExPASy Swiss-Prot
Match: RS3_PYRFU (30S ribosomal protein S3P OS=Pyrococcus furiosus GN=rps3p PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.063e-27 Identity = 71/193 (36.79%), Postives = 105/193 (54.40%), Query Frame = 1 Query: 124 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMXXXXXXXXXXXQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQXP 702 +R F+ + V ++E L +EL GY G++++ TP+ V+G GRRIRELT +++K+F +E+ E++ N L A QA L L G+ RRA Y LR IM +GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GV+G+KV IM P G + P Sbjct: 4 ERYFIREAVREMLIDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIRELTRILEKQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGIHFRRAAYAALRAIMNNGARGVEIRLSGKLTGERAKSIRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVAIM----PPGARLP 190
BLAST of FC923627 vs. ExPASy Swiss-Prot
Match: RS3_PYRKO (30S ribosomal protein S3P OS=Pyrococcus kodakaraensis GN=rps3p PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.368e-27 Identity = 71/199 (35.68%), Postives = 105/199 (52.76%), Query Frame = 1 Query: 124 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMXXXXXXXXXXXQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQXPTTPLPD 720 +R F+ +GV ++E L +EL GY G++++ TP+ V+G GRRIRELT +++K+F +E+ E++ N L A QA L L G+ RRA Y +R IM +GA+G E+ +SGKL +RAKS++F GY+ G P + L+ GV+G+KV IM P LPD Sbjct: 4 ERYFIKEGVKEMLIDEFLEKELRRAGYGGLDIKKTPLGTKVTIFAANPGYVIGRGGRRIRELTRILEKQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGIHFRRAAYSAIRAIMRNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSRGYAQAQLKLGVIGVKVSIM---------PPDAKLPD 191
BLAST of FC923627 vs. ExPASy Swiss-Prot
Match: RS3_PYRAB (30S ribosomal protein S3P OS=Pyrococcus abyssi GN=rps3p PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.420e-26 Identity = 63/182 (34.62%), Postives = 101/182 (55.49%), Query Frame = 1 Query: 124 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMXXXXXXXXXXXQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIM 669 +R F+ + V ++E L +EL GY G++++ TP+ V+G GRRIRELT +++++F +++ +++ N L A QA + L G+ RRA Y +R IM +GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GV+G+KV IM Sbjct: 4 ERYFIREAVKEMLIDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIRELTRILERQFGLENPQIDV--QEIKNPYLNAKVQAVRIAQALERGIHFRRAAYAAMRAIMSNGARGVEIRISGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVAIM 183
BLAST of FC923627 vs. ExPASy Swiss-Prot
Match: RS3_PYRHO (30S ribosomal protein S3P OS=Pyrococcus horikoshii GN=rps3p PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.834e-26 Identity = 63/182 (34.62%), Postives = 101/182 (55.49%), Query Frame = 1 Query: 124 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMXXXXXXXXXXXQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIM 669 +R F+ + V ++E L +EL GY G++++ TP+ V+G GRRIRELT +++++F +++ +++ N L A QA + L G+ RRA Y +R IM +GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GV+G+KV IM Sbjct: 4 ERYFIREAVKEMLIDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIRELTRILERQFGLENPQIDV--QEIKNPYLNAKVQAVRIAQALERGIHFRRAAYSAMRAIMNNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVAIM 183
BLAST of FC923627 vs. ExPASy Swiss-Prot
Match: RS3_METBF (30S ribosomal protein S3P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rps3p PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.181e-24 Identity = 70/202 (34.65%), Postives = 101/202 (50.00%), Query Frame = 1 Query: 124 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMXXXXXXXXXXXQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQXPTTPLPDLVT 729 +RKFV DG A ++E +L GY G+E+ TPM V+G+ G+ IR+LT V R+ ++ A++V L A A L + G R+A + LR +M +GA GCEV++SGKL R++ KF DGY+ SG PV+E +D + + G LG KV+I+ P LPD T Sbjct: 4 ERKFVNDGFVKASMDEYFAEQLNRAGYGGMELNRTPMGTQIVIYSEKPGMVIGKAGKVIRKLTRDVAARYNLENPQID--AQEVKKPELNAQMMASRLAASIERGWYFRKAGHNTLRAVMNAGALGCEVVISGKLTGARSRVEKFVDGYIKHSGNPVDEVVDEGFAVAIKKLGTLGCKVRII---------QPGVVLPDSYT 194
BLAST of FC923627 vs. ExPASy Swiss-Prot
Match: RS3_THEPD (30S ribosomal protein S3P OS=Thermofilum pendens (strain Hrk 5) GN=rps3p PE=3 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 1.216e-23 Identity = 62/181 (34.25%), Postives = 99/181 (54.70%), Query Frame = 1 Query: 127 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMXXXXXXXXXXXQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIM 669 RK ++ G+ + LNE L R+L Y + TP+ V+G KG I+ + V+++ F +++ +V N+ L A A + L+ G+ RRA L IM +GA+G E+++SGKL +QR ++ KF GY+ SG+P E +D A+ HVLL+ G+ G+KV+IM Sbjct: 6 RKVISQGLQYMMLNEYLQRQLVRANYVHAQFFKTPIGTKVIVYAGVPGLVIGRKGANIKAIAEVLEREFGIENPQIDVV--EVPNQDLNAKIMAYRVARALVRGVRFRRAALVALNRIMAAGARGAEIVISGKLTSQRHRTEKFTRGYVPKSGEPGEELVDEAIVHVLLKLGMYGVKVRIM 184
BLAST of FC923627 vs. ExPASy Swiss-Prot
Match: RS3_METHJ (30S ribosomal protein S3P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rps3p PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.589e-23 Identity = 68/193 (35.23%), Postives = 101/193 (52.33%), Query Frame = 1 Query: 124 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMXXXXXXXXXXXQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQXP 702 +RKFVADGV + L EL GY G+++ TP+ V+G+ G+ +R LT + + +E+ ++V+N L A AE L L G R+A LR IM+SGA GCEV++SGKL R + KF +GY+ SG PVN +D + + GV+G++V+++ P G Q P Sbjct: 4 ERKFVADGVRKVRVERHLGHELKRAGYGGMDLIRTPLGTQVTIFAEKPGIVIGKGGKVVRTLTQDLATTYGVESPQIEV--QQVDNPNLNAQIMAERLASALERGWYFRKAGSSTLRRIMDSGALGCEVVISGKLTGARGRVQKFTEGYIKHSGDPVNTLVDKGYAVAIKKLGVIGVQVRLI----PPGAQLP 190 The following BLAST results are available for this feature:
BLAST of FC923627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923627 ID=FC923627; Name=FC923627; organism=Citrus clementina; type=EST; length=729bpback to top |