FC923628

Overview
NameFC923628
Unique NameFC923628
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length676
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC923628 vs. ExPASy Swiss-Prot
Match: DI192_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Arabidopsis thaliana GN=DI19-2 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.580e-11
Identity = 31/106 (29.25%), Postives = 55/106 (51.89%), Query Frame = 3 
Query:  183 MDIDFWA-SRVHSAKHFSAVRASRLNTDNHSIVDE-TEIDDDVKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANLGKDAAEHFMVQHASSLKRRRK 494
            M+ D W  S   S++ + +  A++  +  +  ++E  E+DDD+   +PCPFC  + +   +C H+ EEH  E  N +CP+C+  +     +H    H   LK  +K
Sbjct:    1 MEDDMWCVSSSGSSRSYRSETAAKYQSGPYQDLEEFEEVDDDIAVEYPCPFCASDYDLVELCHHIDEEHRHEANNGICPVCSKRVKMHMVDHITSHHRDVLKSEQK 106
The following BLAST results are available for this feature:
BLAST of FC923628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
DI192_ARATH4.580e-1129.25Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionC31707C04EF StrClemenN Citrus clementina cDNA clone C31707C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923628 ID=FC923628; Name=FC923628; organism=Citrus clementina; type=EST; length=676bp
GGAAGATTTTGTGTGCCAGATCAGCTTCTTCACAGATTATATGACTAAGC
TTCTCAACAACACGCCACAATCTAATCGTCATCTCTCAGTGCATAGCAGC
ATCAGTCCTTGACTCTGTTACCGGAACCTGACGTTTATCGCCGGTTAAAG
CTGACGTGTGCACCCAGTAAGCTGATACCATCATGGACATTGACTTCTGG
GCTTCGAGAGTCCACTCTGCTAAGCACTTCTCTGCTGTTCGAGCTTCACG
ACTCAACACCGATAATCATTCAATAGTGGATGAAACAGAAATAGATGATG
ATGTAAAAGCTTGCTTTCCGTGCCCCTTCTGTTATCTTGAAATTGAAGCT
CACATGATCTGCAGCCATTTGCAGGAAGAGCACTGCTTTGAAATGAAAAA
TGCAGTTTGTCCTCTGTGCGCAGCAAACCTAGGAAAAGATGCTGCTGAAC
ATTTTATGGTACAACATGCTAGTTCGTTAAAGCGCAGGAGAAAATGTCTG
AAATCTGGCCTCAGGAATGGTGGTTCAGCAATGCTTGGCAAGGAACTGAG
CTCGTTTCTTGGTTCACCCACAATTGTTAGGGGAAATGCTCCTGAATCTC
TACCTGATCCGCTGCTATCACCATTTCTCTGCAGTGGAACTCTTTCAGAC
ACCAAGGTATCCAGAAAGATGATTGT
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