FC923633
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923633 vs. ExPASy Swiss-Prot
Match: ACT1_PLAFX (Actin-1 OS=Plasmodium falciparum (isolate HB3) PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 8.824e-28 Identity = 52/117 (44.44%), Postives = 74/117 (63.25%), Query Frame = 1
Query: 196 PMCVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDMGQVWDHAFFSELKIDPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQG 546
P VGRP + ++ E KD VG A R L + YP+ +GIV NW+DM ++W H F++EL+ P E +LLT+ PLNP NRE+M + MFE +N +++ IQAVL+LY+ G
Sbjct: 33 PSIVGRP--KNPGIMVGMEEKDAFVGDEAQTKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRAAPEEHPVLLTEAPLNPKGNRERMTQIMFESFNVPAMYVAIQAVLSLYSSG 147 HSP 2 Score: 36.1946 bits (82), Expect = 8.824e-28 Identity = 15/27 (55.56%), Postives = 20/27 (74.07%), Query Frame = 2
Query: 125 VVCDNGTGYVKCGFAGENFPNSVFPCV 205
+V DNG+G VK G AG++ P SVFP +
Sbjct: 9 LVVDNGSGNVKAGVAGDDAPRSVFPSI 35
BLAST of FC923633 vs. ExPASy Swiss-Prot
Match: ACT1_PLAFO (Actin-1 OS=Plasmodium falciparum (isolate NF54) PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 8.824e-28 Identity = 52/117 (44.44%), Postives = 74/117 (63.25%), Query Frame = 1
Query: 196 PMCVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDMGQVWDHAFFSELKIDPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQG 546
P VGRP + ++ E KD VG A R L + YP+ +GIV NW+DM ++W H F++EL+ P E +LLT+ PLNP NRE+M + MFE +N +++ IQAVL+LY+ G
Sbjct: 33 PSIVGRP--KNPGIMVGMEEKDAFVGDEAQTKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRAAPEEHPVLLTEAPLNPKGNRERMTQIMFESFNVPAMYVAIQAVLSLYSSG 147 HSP 2 Score: 36.1946 bits (82), Expect = 8.824e-28 Identity = 15/27 (55.56%), Postives = 20/27 (74.07%), Query Frame = 2
Query: 125 VVCDNGTGYVKCGFAGENFPNSVFPCV 205
+V DNG+G VK G AG++ P SVFP +
Sbjct: 9 LVVDNGSGNVKAGVAGDDAPRSVFPSI 35
BLAST of FC923633 vs. ExPASy Swiss-Prot
Match: ACT1_PLAF7 (Actin-1 OS=Plasmodium falciparum (isolate 3D7) GN=PFL2215w PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 8.824e-28 Identity = 52/117 (44.44%), Postives = 74/117 (63.25%), Query Frame = 1
Query: 196 PMCVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDMGQVWDHAFFSELKIDPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQG 546
P VGRP + ++ E KD VG A R L + YP+ +GIV NW+DM ++W H F++EL+ P E +LLT+ PLNP NRE+M + MFE +N +++ IQAVL+LY+ G
Sbjct: 33 PSIVGRP--KNPGIMVGMEEKDAFVGDEAQTKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRAAPEEHPVLLTEAPLNPKGNRERMTQIMFESFNVPAMYVAIQAVLSLYSSG 147 HSP 2 Score: 36.1946 bits (82), Expect = 8.824e-28 Identity = 15/27 (55.56%), Postives = 20/27 (74.07%), Query Frame = 2
Query: 125 VVCDNGTGYVKCGFAGENFPNSVFPCV 205
+V DNG+G VK G AG++ P SVFP +
Sbjct: 9 LVVDNGSGNVKAGVAGDDAPRSVFPSI 35
BLAST of FC923633 vs. ExPASy Swiss-Prot
Match: ARP3_DROME (Actin-related protein 3 OS=Drosophila melanogaster GN=Arp66B PE=1 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 1.249e-27 Identity = 39/101 (38.61%), Postives = 57/101 (56.44%), Query Frame = 1
Query: 259 DTIVGAAALDLRHQLDVSYPVNNGIVQNWEDMGQVWDHAFFSELKIDPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGAYEDA 561
D +G A D + YPV +G+V++W+ M + + F L+ +P + LLT+PPLN +NRE E MFE +N G++I +QAVL L A A A
Sbjct: 59 DFFIGDEAFDATGY-SIKYPVRHGLVEDWDLMERFLEQCVFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFETFNVPGLYIAVQAVLALAASWASRSA 158 HSP 2 Score: 58.5362 bits (140), Expect = 1.249e-27 Identity = 26/48 (54.17%), Postives = 35/48 (72.92%), Query Frame = 2
Query: 563 EGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLGDL 706
E LTG+V+DSGDGVTHV+PV +GY K + +AGR+ITS++ L
Sbjct: 160 ERTLTGIVVDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRNITSFIQSL 207 HSP 3 Score: 30.0314 bits (66), Expect = 1.249e-27 Identity = 13/24 (54.17%), Postives = 14/24 (58.33%), Query Frame = 2
Query: 128 VCDNGTGYVKCGFAGENFPNSVFP 199
V D GTGY K GFAG P + P
Sbjct: 9 VIDVGTGYSKLGFAGNKEPQFIIP 32
BLAST of FC923633 vs. ExPASy Swiss-Prot
Match: ACTT1_HUMAN (Actin-related protein T1 OS=Homo sapiens GN=ACTRT1 PE=2 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 2.111e-27 Identity = 37/91 (40.66%), Postives = 54/91 (59.34%), Query Frame = 1
Query: 268 VGAAALDLRHQLDVSYPVNNGIVQNWEDMGQVWDHAFFSELKIDPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYA 540
VG AL L + YP+ G+V W+DM ++W H F EL + P + +L+T+P LNP + REK+ E MFE ++ G ++ AV LYA
Sbjct: 57 VGQEALYKYEALHLHYPIERGLVTGWDDMEKLWKHLFERELGVKPSQQPVLMTEPSLNPREIREKLAEMMFETFSVPGFYLSNHAVAALYA 147 HSP 2 Score: 55.8398 bits (133), Expect = 2.111e-27 Identity = 24/42 (57.14%), Postives = 32/42 (76.19%), Query Frame = 2
Query: 572 LTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYL 697
+TGLV+DSGDGVT VP+ +GYS PH ++ +AGR IT +L
Sbjct: 151 VTGLVVDSGDGVTCTVPIFEGYSLPHAVTKLCMAGRDITEHL 192 HSP 3 Score: 26.9498 bits (58), Expect = 2.111e-27 Identity = 14/32 (43.75%), Postives = 17/32 (53.12%), Query Frame = 2
Query: 125 VVCDNGTGYVKCGFAGENFPNSVFPCVWEGQC 220
V+ DNG+G K G +GE P V V G C
Sbjct: 12 VIFDNGSGLCKAGLSGEIGPRHVISSVL-GHC 42
BLAST of FC923633 vs. ExPASy Swiss-Prot
Match: ACTX_TAKRU (Actin, alpha anomalous OS=Takifugu rubripes PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 2.534e-27 Identity = 49/114 (42.98%), Postives = 71/114 (62.28%), Query Frame = 1
Query: 205 VGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDMGQVWDHAFFSELKIDPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQG 546
VGRP R+++ + + K VG A R L + +P+ GI+ NW+DM ++W H F++EL + P E LLT+ PLNP NREKM + M E +N +++ IQAVL+LYA G
Sbjct: 36 VGRP--RHQDDMDDMGKKGYYVGDEAQSKRDILSLKHPIERGIITNWDDMEKIWHHTFYNELCVAPEEHPTLLTEAPLNPKANREKMTQIMLETFNMPAMYVSIQAVLSLYASG 147 HSP 2 Score: 39.2762 bits (90), Expect = 2.534e-27 Identity = 15/31 (48.39%), Postives = 22/31 (70.97%), Query Frame = 2
Query: 113 NRNVVVCDNGTGYVKCGFAGENFPNSVFPCV 205
+ +VCDNG+G VK GFAG++ P +VF +
Sbjct: 5 DETALVCDNGSGLVKAGFAGDDTPRAVFHAI 35
BLAST of FC923633 vs. ExPASy Swiss-Prot
Match: ACTT1_MACFA (Actin-related protein T1 OS=Macaca fascicularis GN=ACTRT1 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 3.556e-27 Identity = 38/96 (39.58%), Postives = 55/96 (57.29%), Query Frame = 1
Query: 253 LKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDMGQVWDHAFFSELKIDPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYA 540
L VG AL L + YP+ G+V W+DM ++W H F EL + P + +L+T+P LNP + REK+ E MFE ++ G ++ AV LYA
Sbjct: 51 LNQYFVGQEALYKFDALHLHYPIKRGLVTGWDDMEKLWKHLFEWELGVKPSQQPVLMTEPSLNPREIREKLAEMMFENFSVPGFYLSNHAVAALYA 146 HSP 2 Score: 56.6102 bits (135), Expect = 3.556e-27 Identity = 25/45 (55.56%), Postives = 32/45 (71.11%), Query Frame = 2
Query: 572 LTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLGDL 706
+TGLV+DSGDGVT VP+ +GYS PH ++ AGR IT +L L
Sbjct: 150 VTGLVVDSGDGVTCAVPIFEGYSLPHAVTKLYTAGRDITEHLTQL 194 HSP 3 Score: 25.7942 bits (55), Expect = 3.556e-27 Identity = 12/27 (44.44%), Postives = 15/27 (55.56%), Query Frame = 2
Query: 125 VVCDNGTGYVKCGFAGENFPNSVFPCV 205
V+ DNG+G K G +GE P V V
Sbjct: 12 VIFDNGSGLCKAGVSGEIGPRHVINSV 38
BLAST of FC923633 vs. ExPASy Swiss-Prot
Match: ACT_FUCDI (Actin OS=Fucus distichus PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 7.277e-27 Identity = 51/118 (43.22%), Postives = 77/118 (65.25%), Query Frame = 1
Query: 196 PMCVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDMGQVWDHAFFSELKIDPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGA 549
P VGRP ++ ++ + KD VG A R L + YP+ +GIV NW+DM ++W H F++EL++ P E +LLT+ PLNP N+E+M + MFE +N +++ IQAVL+LYA G+
Sbjct: 32 PSIVGRP--KHPGIMVGMDQKDAYVGDEAQSKRGVLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEVPLNPKANKERMTQIMFETFNVLAMYVNIQAVLSLYASGS 147 HSP 2 Score: 30.0314 bits (66), Expect = 7.277e-27 Identity = 13/27 (48.15%), Postives = 19/27 (70.37%), Query Frame = 2
Query: 125 VVCDNGTGYVKCGFAGENFPNSVFPCV 205
+V DNG+G K GF G++ P +VFP +
Sbjct: 9 LVVDNGSGMCKAGF-GDDAPRAVFPSI 34
BLAST of FC923633 vs. ExPASy Swiss-Prot
Match: ACT1_PLABA (Actin-1 OS=Plasmodium berghei (strain Anka) GN=PB000323.01.0 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.233e-26 Identity = 52/117 (44.44%), Postives = 74/117 (63.25%), Query Frame = 1
Query: 196 PMCVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDMGQVWDHAFFSELKIDPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQG 546
P VGRP + ++ E KD VG A R L + YP+ +GIV NW+DM ++W H F++EL+ PE +LLT+ PLNP NRE+M + MFE +N +++ IQAVL+LY+ G
Sbjct: 33 PSIVGRP--KNPGIMVGMEEKDAFVGDEAQTKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRA-APEHPVLLTEAPLNPKGNRERMTQIMFESFNVPAMYVAIQAVLSLYSSG 146 HSP 2 Score: 36.1946 bits (82), Expect = 1.233e-26 Identity = 15/27 (55.56%), Postives = 20/27 (74.07%), Query Frame = 2
Query: 125 VVCDNGTGYVKCGFAGENFPNSVFPCV 205
+V DNG+G VK G AG++ P SVFP +
Sbjct: 9 LVIDNGSGNVKAGVAGDDAPRSVFPSI 35
BLAST of FC923633 vs. ExPASy Swiss-Prot
Match: ARP3_YEAST (Actin-related protein 3 OS=Saccharomyces cerevisiae GN=ARP3 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.600e-26 Identity = 36/78 (46.15%), Postives = 56/78 (71.79%), Query Frame = 1
Query: 307 VSYPVNNGIVQNWEDMGQVWDHAFFSELKIDPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYA 540
+SYP+ +G V+NW+ M + W+++ F L+ +P + LLT+PPLNP +NRE++ E FE +N AG++I +QAVL L A
Sbjct: 112 LSYPIRHGQVENWDHMERFWENSIFKYLRTEPEDHFFLLTEPPLNPPENREQVAEIFFESFNCAGLYIAVQAVLALAA 189 HSP 2 Score: 55.0694 bits (131), Expect = 1.600e-26 Identity = 26/51 (50.98%), Postives = 34/51 (66.67%), Query Frame = 2
Query: 554 KMPEGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLGDL 706
K+ + LTG VIDSGDGVTHV+PV +GY K + +AGR IT ++ L
Sbjct: 195 KVTDRSLTGTVIDSGDGVTHVIPVAEGYVIGSAIKNIPIAGRDITLFIQSL 245 The following BLAST results are available for this feature:
BLAST of FC923633 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 432
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923633 ID=FC923633; Name=FC923633; organism=Citrus clementina; type=EST; length=706bpback to top |