FC923633
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923633 vs. ExPASy Swiss-Prot
Match: ACT18_DICDI (Actin-18 OS=Dictyostelium discoideum GN=act18 PE=3 SV=3) HSP 1 Score: 108.997 bits (271), Expect = 2.089e-26 Identity = 52/114 (45.61%), Postives = 73/114 (64.04%), Query Frame = 1
Query: 205 VGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDMGQVWDHAFFSELKIDPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQG 546
VGRP RY + KD+ +G A + L + YP+ GIV NW+DM ++W H F++EL + P E +LLT+ PLNP KNREKM + MFE +N +++ IQAVL+LY+ G
Sbjct: 36 VGRP--RYTGVMDVMGQKDSYIGDEAHSRKGFLTLKYPIERGIVTNWDDMEEIWHHTFYNELGVAPEEHPVLLTEQPLNPKKNREKMTQIMFETFNTPAMYVAIQAVLSLYSSG 147 HSP 2 Score: 31.187 bits (69), Expect = 2.089e-26 Identity = 12/27 (44.44%), Postives = 18/27 (66.67%), Query Frame = 2
Query: 125 VVCDNGTGYVKCGFAGENFPNSVFPCV 205
+V DNG+ K GFAG++ P +VF +
Sbjct: 9 IVIDNGSDMCKAGFAGDDAPRAVFQSI 35
BLAST of FC923633 vs. ExPASy Swiss-Prot
Match: ACL7A_HUMAN (Actin-like protein 7A OS=Homo sapiens GN=ACTL7A PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 2.196e-26 Identity = 39/114 (34.21%), Postives = 66/114 (57.89%), Query Frame = 1
Query: 205 VGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDMGQVWDHAFFSELKIDPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQG 546
VG+P + E + K+T VG + L + P+ +GI+ +W+ + +W++ F E+KI P E +L++DPPL+P NREK E +FE +N + I Q+ L++Y+ G
Sbjct: 99 VGKPYM--ETAKTGDNRKETFVGQELNNTNVHLKLVNPLRHGIIVDWDTVQDIWEYLFRQEMKIAPEEHAVLVSDPPLSPHTNREKYAEMLFEAFNTPAMHIAYQSRLSMYSYG 210 HSP 2 Score: 48.9062 bits (115), Expect = 2.196e-26 Identity = 20/44 (45.45%), Postives = 32/44 (72.73%), Query Frame = 2
Query: 566 GLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYL 697
G +GLV++ G GV++VVP+ +GY P +T R++ AG +T+YL
Sbjct: 210 GRTSGLVVEVGHGVSYVVPIYEGYPLPSITGRLDYAGSDLTAYL 253 HSP 3 Score: 31.187 bits (69), Expect = 2.196e-26 Identity = 13/16 (81.25%), Postives = 13/16 (81.25%), Query Frame = 2
Query: 125 VVCDNGTGYVKCGFAG 172
VV D GTGY KCGFAG
Sbjct: 72 VVVDLGTGYCKCGFAG 87
BLAST of FC923633 vs. ExPASy Swiss-Prot
Match: ARP3B_MOUSE (Actin-related protein 3B OS=Mus musculus GN=Actr3b PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 3.703e-26 Identity = 35/94 (37.23%), Postives = 57/94 (60.64%), Query Frame = 1
Query: 259 DTIVGAAALDLRHQLDVSYPVNNGIVQNWEDMGQVWDHAFFSELKIDPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYA 540
D +G A+D + +P+ +GIV++W+ M + + F L+ +P + L+T+PPLN +NRE + E MFE +N G++I +QAVL L A
Sbjct: 59 DFFIGDEAID-KPTYATKWPIRHGIVEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLALAA 151 HSP 2 Score: 55.8398 bits (133), Expect = 3.703e-26 Identity = 26/48 (54.17%), Postives = 33/48 (68.75%), Query Frame = 2
Query: 563 EGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLGDL 706
E LTG+VIDSGDGVTHV+PV +GY K + +AGR IT ++ L
Sbjct: 160 ERTLTGIVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQL 207 HSP 3 Score: 29.6462 bits (65), Expect = 3.703e-26 Identity = 12/24 (50.00%), Postives = 14/24 (58.33%), Query Frame = 2
Query: 128 VCDNGTGYVKCGFAGENFPNSVFP 199
V D GTGY K G+AG P + P
Sbjct: 9 VVDCGTGYTKLGYAGNTEPQFIIP 32
BLAST of FC923633 vs. ExPASy Swiss-Prot
Match: ACTY_DROME (Actin-like protein 53D OS=Drosophila melanogaster GN=Arp53D PE=2 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 4.607e-26 Identity = 51/117 (43.59%), Postives = 74/117 (63.25%), Query Frame = 1
Query: 196 PMCVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDMGQVWDHAFFSELKIDPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQG 546
P VGRP R+ L++ + D+++G AA R L + YP+ +G+V+NW++M VW H + L+ DP + LLT+ PLNP KNREKM E MFE + ++ +QAVL+LYA G
Sbjct: 38 PSIVGRP--RHLNVLLDSVIGDSVIGEAAARKRGILTLKYPIEHGMVKNWDEMEMVWQHTY-ELLRADPMDLPALLTEAPLNPKKNREKMTEIMFEHFQVPAFYVAVQAVLSLYATG 151 HSP 2 Score: 34.2686 bits (77), Expect = 4.607e-26 Identity = 14/27 (51.85%), Postives = 19/27 (70.37%), Query Frame = 2
Query: 125 VVCDNGTGYVKCGFAGENFPNSVFPCV 205
VV DNG+G K GF+ E+ P +VFP +
Sbjct: 14 VVIDNGSGVCKAGFSPEDTPRAVFPSI 40
BLAST of FC923633 vs. ExPASy Swiss-Prot
Match: ACL7A_RAT (Actin-like protein 7A OS=Rattus norvegicus GN=Actl7a PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 4.796e-26 Identity = 39/114 (34.21%), Postives = 66/114 (57.89%), Query Frame = 1
Query: 205 VGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDMGQVWDHAFFSELKIDPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQG 546
VG+P + E + K+T VG + L + P+ +GI+ +W+ + +W++ F E+KI P E +L++DPPL+P NREK E +FE +N + I Q+ L++Y+ G
Sbjct: 104 VGKPYM--ETAKTGDNRKETFVGRELFNPDIHLKLVNPLRHGIIVDWDTVQDIWEYLFRQEMKIAPEEHAVLVSDPPLSPHTNREKYAEMLFETFNTPAMHIAYQSRLSMYSYG 215 HSP 2 Score: 49.6766 bits (117), Expect = 4.796e-26 Identity = 21/47 (44.68%), Postives = 34/47 (72.34%), Query Frame = 2
Query: 566 GLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLGDL 706
G +GLV++ G GV++VVP+ +GY P +T R++ AG +T+YL +L
Sbjct: 215 GRTSGLVVEVGHGVSYVVPIYEGYPLPSITGRLDYAGSDLTNYLMNL 261 HSP 3 Score: 29.6462 bits (65), Expect = 4.796e-26 Identity = 12/16 (75.00%), Postives = 13/16 (81.25%), Query Frame = 2
Query: 125 VVCDNGTGYVKCGFAG 172
VV D GTG+ KCGFAG
Sbjct: 77 VVVDLGTGFCKCGFAG 92
BLAST of FC923633 vs. ExPASy Swiss-Prot
Match: ARP3B_HUMAN (Actin-related protein 3B OS=Homo sapiens GN=ACTR3B PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 4.805e-26 Identity = 34/94 (36.17%), Postives = 57/94 (60.64%), Query Frame = 1
Query: 259 DTIVGAAALDLRHQLDVSYPVNNGIVQNWEDMGQVWDHAFFSELKIDPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYA 540
D +G A+D + +P+ +GI+++W+ M + + F L+ +P + L+T+PPLN +NRE + E MFE +N G++I +QAVL L A
Sbjct: 59 DFFIGDEAID-KPTYATKWPIRHGIIEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLALAA 151 HSP 2 Score: 55.8398 bits (133), Expect = 4.805e-26 Identity = 26/48 (54.17%), Postives = 33/48 (68.75%), Query Frame = 2
Query: 563 EGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLGDL 706
E LTG+VIDSGDGVTHV+PV +GY K + +AGR IT ++ L
Sbjct: 160 ERTLTGIVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQL 207 HSP 3 Score: 29.6462 bits (65), Expect = 4.805e-26 Identity = 12/24 (50.00%), Postives = 14/24 (58.33%), Query Frame = 2
Query: 128 VCDNGTGYVKCGFAGENFPNSVFP 199
V D GTGY K G+AG P + P
Sbjct: 9 VVDCGTGYTKLGYAGNTEPQFIIP 32
BLAST of FC923633 vs. ExPASy Swiss-Prot
Match: ACL7A_MOUSE (Actin-like protein 7A OS=Mus musculus GN=Actl7a PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.224e-26 Identity = 39/114 (34.21%), Postives = 66/114 (57.89%), Query Frame = 1
Query: 205 VGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDMGQVWDHAFFSELKIDPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQG 546
VG+P + E + K+T VG + L + P+ +GI+ +W+ + +W++ F E+KI P E +L++DPPL+P NREK E +FE +N + I Q+ L++Y+ G
Sbjct: 104 VGKPYM--ETAKTGDNRKETFVGHELFNPDIHLKLVNPLRHGIIVDWDTVQDIWEYLFRQEMKIAPEEHAVLVSDPPLSPHTNREKYAEMLFETFNTPAMHIAYQSRLSMYSYG 215 HSP 2 Score: 49.6766 bits (117), Expect = 6.224e-26 Identity = 21/47 (44.68%), Postives = 34/47 (72.34%), Query Frame = 2
Query: 566 GLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLGDL 706
G +GLV++ G GV++VVP+ +GY P +T R++ AG +T+YL +L
Sbjct: 215 GRTSGLVVEVGHGVSYVVPIYEGYPLPSITGRLDYAGSDLTTYLMNL 261 HSP 3 Score: 29.6462 bits (65), Expect = 6.224e-26 Identity = 12/16 (75.00%), Postives = 13/16 (81.25%), Query Frame = 2
Query: 125 VVCDNGTGYVKCGFAG 172
VV D GTG+ KCGFAG
Sbjct: 77 VVVDLGTGFCKCGFAG 92
BLAST of FC923633 vs. ExPASy Swiss-Prot
Match: ACT1_ABSGL (Actin-1 (Fragment) OS=Absidia glauca GN=ACT1 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 8.032e-26 Identity = 48/109 (44.04%), Postives = 69/109 (63.30%), Query Frame = 1
Query: 196 PMCVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDMGQVWDHAFFSELKIDPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQA 522
P VGRP R++ ++ KD+ VG A R L + YP+ +GIV NW+DM ++W H F++EL++ P E +LLT+ PLNP NREKM + MFE +N ++ IQA
Sbjct: 34 PSIVGRP--RHQGIMVGMGQKDSYVGDEAQSKRGILTLRYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKSNREKMTQIMFETFNAPAFYVSIQA 140 HSP 2 Score: 36.1946 bits (82), Expect = 8.032e-26 Identity = 14/27 (51.85%), Postives = 20/27 (74.07%), Query Frame = 2
Query: 125 VVCDNGTGYVKCGFAGENFPNSVFPCV 205
+V DNG+G K GFAG++ P +VFP +
Sbjct: 10 LVIDNGSGMCKAGFAGDDAPRAVFPSI 36
BLAST of FC923633 vs. ExPASy Swiss-Prot
Match: ARPM1_MOUSE (Actin-related protein M1 homolog OS=Mus musculus GN=Arpm1 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 8.125e-26 Identity = 33/97 (34.02%), Postives = 54/97 (55.67%), Query Frame = 1
Query: 256 KDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDMGQVWDHAFFSELKIDPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQG 546
++ VG A + R L +SYPV G++ +W DM +W H + L ++ + +L+T+P LNP +R+ + E FE ++ QAVL L+A G
Sbjct: 47 QELCVGDQAQERRSFLSISYPVERGLISSWGDMEIMWKHIYDYNLNLNASDGPVLVTEPALNPLADRQHISEVFFENLGVPAFYMSAQAVLALFAAG 143 HSP 2 Score: 54.299 bits (129), Expect = 8.125e-26 Identity = 25/51 (49.02%), Postives = 33/51 (64.71%), Query Frame = 2
Query: 545 VLMKMPEGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYL 697
VL G TGLV++SG G+T VP+ +GY H K++NVAG +TSYL
Sbjct: 136 VLALFAAGFTTGLVLNSGAGITQCVPIFEGYCLSHGVKQLNVAGSDLTSYL 186 HSP 3 Score: 31.5722 bits (70), Expect = 8.125e-26 Identity = 13/25 (52.00%), Postives = 16/25 (64.00%), Query Frame = 2
Query: 125 VVCDNGTGYVKCGFAGENFPNSVFP 199
VV DNG+G +K G AG P V+P
Sbjct: 8 VVIDNGSGMIKAGLAGTREPQFVYP 32
BLAST of FC923633 vs. ExPASy Swiss-Prot
Match: ARP3_TAKRU (Actin-related protein 3 OS=Takifugu rubripes GN=actr3 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.050e-25 Identity = 36/94 (38.30%), Postives = 56/94 (59.57%), Query Frame = 1
Query: 259 DTIVGAAALDLRHQLDVSYPVNNGIVQNWEDMGQVWDHAFFSELKIDPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYA 540
D +G A+D + +P+ +GIV++W+ M + + F L+ +P + LLT+PPLN +NRE E MFE +N G++I +QAVL L A
Sbjct: 59 DFFIGDEAID-KPPYATKWPIRHGIVEDWDLMERFMEQIIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAA 151 HSP 2 Score: 53.5286 bits (127), Expect = 1.050e-25 Identity = 26/48 (54.17%), Postives = 31/48 (64.58%), Query Frame = 2
Query: 563 EGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLGDL 706
E LTG VIDSGDGVTHV+PV +GY K + +AGR IT + L
Sbjct: 160 ERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFTQQL 207 HSP 3 Score: 30.8018 bits (68), Expect = 1.050e-25 Identity = 16/38 (42.11%), Postives = 18/38 (47.37%), Query Frame = 2
Query: 128 VCDNGTGYVKCGFAGENFPNSVFPCVWEGQCYATKNHS 241
V D GTGY K G+AG P + P C A K S
Sbjct: 9 VVDCGTGYTKLGYAGNTEPQFIMP-----SCIAIKESS 41 The following BLAST results are available for this feature:
BLAST of FC923633 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 432
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923633 ID=FC923633; Name=FC923633; organism=Citrus clementina; type=EST; length=706bpback to top |