FC923635
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH601_SYNJA (60 kDa chaperonin 1 OS=Synechococcus sp. (strain JA-3-3Ab) GN=groL1 PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 5.647e-47 Identity = 106/192 (55.21%), Postives = 134/192 (69.79%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAG 578 VAQIR +E + +Y+REKL ERIAKL+GGVAVI+VGA TETELK++KLR+EDALNAT+AA TLL LS + A K L N EE+VGADIV RAL PL IA NAG+ GSVV EKVL + +G++A TG Y D+ A GI+DP KVVR L++A+S+A +L ++ +VVE +PEP G Sbjct: 345 VAQIRKQLETTDSEYDREKLQERIAKLAGGVAVIKVGAATETELKDRKLRIEDALNATRAAVEEGIVPGGGATLLHLSKGIPAFKANL-NAEEQVGADIVCRALQAPLYQIAHNAGLEGSVVVEKVLEKE-MPFGFDALTGTYVDMFAQGIVDPAKVVRSALQNAASIAAMYLTTEAIVVE--KPEPKTKTG 532
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH601_RHORT (60 kDa chaperonin 1 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=groL1 PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 9.632e-47 Identity = 99/199 (49.75%), Postives = 138/199 (69.35%), Query Frame = 3 Query: 6 AQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGY 602 AQIR IE+ DY+REKL ER+AKLSGGVAVI+VG +E E+KEKK RV+DA++AT+AA LL + +DA+ N ++KVG +IV+RAL P++ IA+NAGV+G+VV+ K+L S + +GYNA TG YE+L+ G+IDPTKVVR L+ A+SVA + ++ +V EI E +PA+PAG M + + Sbjct: 347 AQIRATIEDTTSDYDREKLQERLAKLSGGVAVIRVGGASEVEVKEKKDRVDDAMHATRAAVEEGIIAGGGVALLHAAKALDALSPA--NADQKVGIEIVRRALQAPVRQIAENAGVDGAVVAGKLLESSDADFGYNAQTGVYENLVKVGVIDPTKVVRTALQGAASVASLLITTEAMVAEIPEKKPALPAGGGMGDMDF 543
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH601_SYNS3 (60 kDa chaperonin 1 OS=Synechococcus sp. (strain CC9311) GN=groL1 PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 4.780e-46 Identity = 102/199 (51.26%), Postives = 139/199 (69.85%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 599 VA I+ ++N + +Y++EKLNERIAKL+GGVAVI+VGA TETELK +KLR+EDALNAT+AA TLL +S+++DA+ L+ D +K G +IV+RAL PL+ IA+NAG NG VV ++V +S G+NA TGN+EDLM AGI+D +KVVR L+ A S+A + ++ VV + +PEP PAG D G Sbjct: 344 VASIKRELDNTDSEYDQEKLNERIAKLAGGVAVIKVGAPTETELKNRKLRIEDALNATRAAVEEGIVAGGGSTLLHISAELDALTSGLEGD-QKTGVEIVQRALSAPLRQIAENAGSNGDVVVDRVRNSGE---GFNALTGNFEDLMNAGILDASKVVRLALQDAVSIASLVVTTEVVVAD--KPEPPAPAGGGGDPMG 536
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH60_SOLUE (60 kDa chaperonin OS=Solibacter usitatus (strain Ellin6076) GN=groL PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 8.154e-46 Identity = 99/194 (51.03%), Postives = 131/194 (67.53%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNP 584 + Q+R I+ DY+REKL ER+AKL+GGVAVI+VGA TETE+KEKK RVEDAL+AT+AA LLR + + K +D DE+ +G IVKRA PL+ I N+G G++V +KV + N+ YGYNAAT YEDL+AAG+IDPTKV R L+HA+S+A L ++ ++ EI E + A PAG P Sbjct: 344 IKQLRAQIDETTSDYDREKLQERLAKLAGGVAVIKVGAATETEMKEKKARVEDALHATRAAVEEGIVPGGGVALLRAAKALATFK--VDGDEQ-IGVSIVKRACEEPLRQIVSNSGTEGAIVVDKVRENANNNYGYNAATDTYEDLVAAGVIDPTKVTRSALQHAASIAGLMLTTEAMIAEIPEKKSA-PAGGP 533
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH60_DESOH (60 kDa chaperonin OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=groL PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 8.154e-46 Identity = 107/203 (52.71%), Postives = 132/203 (65.02%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVE--IKEPEPAMPAGNPMDNSGYG 605 V QIR IE+ DY+REKL ER+AKL GGVAVI VGA TETE+KEKK RVEDALNAT+AA L+R +DA+ + EEK+G +V RA+ PL+ IA NAGV GSVV EKV ++ +GYNAATG+Y DL+AAG+IDPTKVVR L++A SVA L ++ ++ E KE AMP G G G Sbjct: 346 VKQIRAQIEDTTSDYDREKLQERLAKLVGGVAVINVGAATETEMKEKKARVEDALNATRAAVEEGVLPGGGVALVRC---LDALSKIKIKSEEKLGVKVVMRAIEEPLRRIANNAGVEGSVVIEKV-KNETGSFGYNAATGDYGDLIAAGVIDPTKVVRFALQNACSVASVMLTTEAMIAEKPSKEEPAAMPGGGMGGMGGMG 544
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH601_ACAM1 (60 kDa chaperonin 1 OS=Acaryochloris marina (strain MBIC 11017) GN=groL1 PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 8.154e-46 Identity = 103/199 (51.76%), Postives = 136/199 (68.34%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 599 V Q+R ++ + +Y++EKL ERIAKL+GGVAVI+VGA TETELK++KLR+EDALNATKAA TL+ L+ ++++K L DEEKVGAD+V AL PL IA NAG G+VV EKV +D YGYNA T YED++AAG++DP KVVR L++A S+A L ++ +VV+ +PEPA A M G Sbjct: 344 VEQLRRQLDETDSEYDKEKLQERIAKLAGGVAVIKVGAATETELKDRKLRIEDALNATKAAVAEGIVPGGGTTLIHLTKTIESVKAQL-KDEEKVGADLVGIALEAPLTQIADNAGKEGAVVVEKVRDAD-FSYGYNAMTDTYEDMIAAGVVDPAKVVRSGLQNAGSIAGMVLTTEALVVD--KPEPAGAAAPDMGGMG 538
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH60_GEMAT (60 kDa chaperonin OS=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) GN=groL PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 3.099e-45 Identity = 95/194 (48.97%), Postives = 132/194 (68.04%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNP 584 V +IR I+ + DY+REKL ER+AKL+GGVAVI VGA TE E+KEKK RVEDAL+AT+AA L+R + +K + +E++G DIV+RA+ PL++I +NAG GS+V EK+ ++ +GYNA T YEDL+ AG+IDPTKV R L++A+S+A L ++ ++VE KE +PA PAG P Sbjct: 346 VREIRGAIDKSTSDYDREKLQERLAKLAGGVAVINVGAATEAEMKEKKARVEDALHATRAAVEEGIVPGGGVALIRAQHVLKDVK--VAERDEQIGVDIVRRAIEEPLRMIVQNAGGEGSIVVEKIRTAKETSFGYNALTDVYEDLVQAGVIDPTKVTRTALQNAASIAGLLLTTEALIVEKKEDKPAAPAGGP 537
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH602_GLOVI (60 kDa chaperonin 2 OS=Gloeobacter violaceus GN=groL2 PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 3.099e-45 Identity = 100/201 (49.75%), Postives = 136/201 (67.66%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 605 +AQI +E+ + D++REKL ER+AKL+GGVAVI+VGA TETELK++KLR+EDALNATKAA TLL L+ K+DAIK L D+EK GAD++ RAL PL+ IA NAGV GSV+++KV D GY+A G + D++AAG+ DP KVVR L++A+S+A L ++ ++V+ +PE D G G Sbjct: 345 IAQIHKQMEDTDSDFDREKLQERLAKLAGGVAVIKVGAATETELKDRKLRIEDALNATKAAVEEGIVPGGGTTLLHLTKKIDAIKAGL-ADDEKTGADLIARALEAPLRQIADNAGVEGSVIAQKVRELD-FNIGYDAMKGEFVDMLAAGVADPAKVVRSALQNAASIAAMVLTTEVLIVD--KPEKKKAGAGAPDMGGMG 541
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH601_GLUDA (60 kDa chaperonin 1 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=groL1 PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 3.099e-45 Identity = 99/198 (50.00%), Postives = 137/198 (69.19%), Query Frame = 3 Query: 9 QIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE-PAMPAGNPMDNSG 599 QIR IE DY+REKL ER+AKL+GGVAVI+VG TE E+KE+K RV+DAL+AT+AA L R S+ + + ND+++VGA+I+++AL PL+ IA NAG +G+V++ KVL S+++ YG++A G+Y+DL+AAGIIDPTKVVR L+ ASSVA + ++ +V E E + PAMPAG M G Sbjct: 348 QIRAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKERKDRVDDALHATRAAVEEGIVPGGGTALARASTALGNLH--FHNDDQRVGAEIIRKALQAPLRQIAHNAGEDGAVIAGKVLESNDYNYGFDAQIGDYKDLVAAGIIDPTKVVRTALQDASSVAGLLITTEAMVAEKPEKKAPAMPAGGGMGGMG 543
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH60_WOLSU (60 kDa chaperonin OS=Wolinella succinogenes GN=groL PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 4.047e-45 Identity = 102/199 (51.26%), Postives = 131/199 (65.83%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 599 VAQIRT IE DY+REKL ER+AKLSGGVAVI+VGA +E E+KEKK RV+DAL+ATKAA L+R ++KV K L DE K+G +I+KRA+ PLK IA+NAG + VV+ V + N +G+NAA G Y D+ A GIIDP KV R L++A SV+ L ++ + EIKE +PAMP + M G Sbjct: 346 VAQIRTQIEATTSDYDREKLQERLAKLSGGVAVIKVGAASEVEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIRAAAKV---KLELSGDE-KIGYEIIKRAISAPLKQIAQNAGFDAGVVANNVEQNGNENFGFNAANGEYVDMFAEGIIDPLKVARIALQNAVSVSSLLLTTEATISEIKEDKPAMPDMSGMGGMG 540 The following BLAST results are available for this feature:
BLAST of FC923635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923635 ID=FC923635; Name=FC923635; organism=Citrus clementina; type=EST; length=706bpback to top |