FC923635
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH602_RHIEC (60 kDa chaperonin 2 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=groL2 PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 6.903e-45 Identity = 99/197 (50.25%), Postives = 130/197 (65.99%), Query Frame = 3 Query: 6 AQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVE--IKEPEPAMPAGNPMD 590 AQIR IE DY+REKL ER+AKL+GGVAVI+VG TE E+KEKK RV+DAL+AT+AA LLR +D+IK ND+++VG DIV+RA+ P++ IA+NAG GS++ K+ + YG+NA TG Y DL A G+IDP KVVR L+ A+SVA + ++ ++ E KE PAMPAG MD Sbjct: 347 AQIRAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRVDDALHATRAAVEEGILPGGGVALLRAVKALDSIKTA--NDDQRVGVDIVRRAIEAPVRQIAENAGAEGSIIVGKLREKSDFSYGWNAQTGEYGDLYAQGVIDPAKVVRTALQDAASVAGLLVTTEAMIAEKPKKEAAPAMPAGAGMD 541
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH60_SULSY (60 kDa chaperonin OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=groL PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 9.015e-45 Identity = 100/201 (49.75%), Postives = 133/201 (66.17%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMP-AGNPMDNSGY 602 + QI+ IE +Y++EKL ER+AKL+GGVA+I+VGA TE ELKEKK RV+DA++ATKAA + R S + IKE +N ++ G IVK A PLK IA NAG GSV+ EK+ DN YG++AATG Y D++ AGIIDPTKVVR L++A+S+A T L ++C+V EIKE E +P AG M + + Sbjct: 346 IEQIKKQIETTTSEYDKEKLQERLAKLAGGVAIIKVGAATEAELKEKKDRVDDAVHATKAAVEEGIVPGGGIAIFRASRALCNIKE--ENTDKAWGIKIVKNACKVPLKQIAYNAGFEGSVIIEKIKDVDNVNYGFDAATGEYVDMVEAGIIDPTKVVRTALQNAASIAGTMLTAECLVAEIKEKEEKLPGAGGGMGDMDF 544
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH60_DESVV (60 kDa chaperonin OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=groL PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.177e-44 Identity = 99/199 (49.75%), Postives = 128/199 (64.32%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 599 V QIR IE DY+REKL ER+AKL GGVAVI VGA TETE+KEKK RVEDALNAT+AA L+R++ +D IK +D+E G +I++RA+ PL+ IA NAG GS+V E+V + +G+NAATG YEDL+ G+IDP KV R L++A+SVA L ++C + E EP+ MP M G Sbjct: 346 VKQIRAQIEETTSDYDREKLQERLAKLVGGVAVIHVGAATETEMKEKKDRVEDALNATRAAVEEGIVPGGGTALVRVAKVLDDIKPA--DDDETAGVNIIRRAIEEPLRQIASNAGFEGSIVVERVREGKD-GFGFNAATGEYEDLIGVGVIDPKKVTRIALQNAASVASLLLTTECAIAEKPEPKKDMPMPGGMGGMG 541
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH60_DESVH (60 kDa chaperonin OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=groL PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.177e-44 Identity = 99/199 (49.75%), Postives = 128/199 (64.32%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 599 V QIR IE DY+REKL ER+AKL GGVAVI VGA TETE+KEKK RVEDALNAT+AA L+R++ +D IK +D+E G +I++RA+ PL+ IA NAG GS+V E+V + +G+NAATG YEDL+ G+IDP KV R L++A+SVA L ++C + E EP+ MP M G Sbjct: 346 VKQIRAQIEETTSDYDREKLQERLAKLVGGVAVIHVGAATETEMKEKKDRVEDALNATRAAVEEGIVPGGGTALVRVAKVLDDIKPA--DDDETAGVNIIRRAIEEPLRQIASNAGFEGSIVVERVREGKD-GFGFNAATGEYEDLIGVGVIDPKKVTRIALQNAASVASLLLTTECAIAEKPEPKKDMPMPGGMGGMG 541
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH601_GLOVI (60 kDa chaperonin 1 OS=Gloeobacter violaceus GN=groL1 PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.177e-44 Identity = 98/191 (51.31%), Postives = 137/191 (71.73%), Query Frame = 3 Query: 6 AQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAG 578 AQI+ IE + +Y+REKL ER+AKLSGGVAVI+VGA TETELK++KLR+EDA+NATKAA LL L++ + ++L + EEK+GA I+++AL PL+ IA+NAG+ GSV++EKV + + +G+NA T YEDL+AAGIIDP KV R L++A+S+A L ++C+VV+ K + PAG Sbjct: 345 AQIKQQIEETDSEYDREKLQERLAKLSGGVAVIKVGAATETELKDRKLRIEDAVNATKAAIAEGIVPGGGTALLHLAAGMGGFIDSL-SGEEKIGARIIQKALEGPLRQIAENAGLEGSVIAEKVRNLE-FNFGFNAMTNEYEDLVAAGIIDPVKVTRSALQNAASIAAMVLTTECIVVD-KPEDDKTPAG 532
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: RUBA_ARATH (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Arabidopsis thaliana GN=At2g28000 PE=1 SV=2) HSP 1 Score: 179.489 bits (454), Expect = 1.538e-44 Identity = 98/191 (51.31%), Postives = 133/191 (69.63%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPA 575 +AQ++ + + Y+ EKL ERIAKLSGGVAVI+VGA TETEL+++KLR+EDA NAT AA L+ LS+ + AIKET ++ +E++GADIV++AL P LIA+NAGV G VV EK++ SD + GYNA T YE+L AG+IDP KV RC L++A+SVA L + +VV+ +P+P PA Sbjct: 390 IAQLKKELFETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTVIPAIKETFEDADERLGADIVQKALLSPAALIAQNAGVEGEVVVEKIMFSD-WENGYNAMTDTYENLFEAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVD--KPKPKAPA 577
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH602_RHORT (60 kDa chaperonin 2 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=groL2 PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.538e-44 Identity = 96/200 (48.00%), Postives = 137/200 (68.50%), Query Frame = 3 Query: 6 AQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 605 +QIR IE+ DY+REKL ER+AKL+GGVAVI+VG TETE+KEKK RV+DA++AT+AA LL +D++K N ++ VG +IV+RAL P++ IA+NAGV+G+VV+ K+L + + +GYNA TG YE+L+ AG+IDPTKVVR L+ A+S+A + ++ +V EI E + AMP+ + G G Sbjct: 347 SQIRANIEDTSSDYDREKLQERLAKLAGGVAVIKVGGATETEVKEKKDRVDDAMHATRAAVEEGVVAGGGVALLHAIRSLDSVKGA--NPDQNVGIEIVRRALQAPVRQIAENAGVDGAVVAGKLLENSDTDFGYNAQTGIYENLVTAGVIDPTKVVRAALQGAASIAGLLITTEAMVAEIPEKKDAMPSPDMGGMGGMG 544
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: RUB1_BRANA (RuBisCO large subunit-binding protein subunit alpha, chloroplastic (Fragment) OS=Brassica napus PE=2 SV=2) HSP 1 Score: 179.104 bits (453), Expect = 2.008e-44 Identity = 95/194 (48.97%), Postives = 135/194 (69.59%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNP 584 ++Q++ + + Y+ EKL ERIAKL+GGVAVI+VGA TETEL+++KLR+EDA NAT AA TL+ LS+ + AIKE L++ +E++GADIV++AL P LIA+NAG+ G VV EK++ S+ + GYNA T YE+L+ AG+IDP KV RC L++A+SVA L + +VV+ +P+P P P Sbjct: 350 ISQLKKELSETDSVYDSEKLAERIAKLAGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGATLVHLSTVIPAIKEKLEDADERLGADIVQKALVAPAALIAQNAGIEGEVVVEKIMFSE-WEIGYNAMTDTYENLLEAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVD--KPKPKAPTAAP 540
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH60_ARCB4 (60 kDa chaperonin OS=Arcobacter butzleri (strain RM4018) GN=groL PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.623e-44 Identity = 101/200 (50.50%), Postives = 130/200 (65.00%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLD-NDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 599 V QI+ I N DY+REKL ER+AKLSGGVAVI+VGA TETE+KEKK RV+DAL+AT+AA L++ S KV+ LD +E++GADIV RA+ PLK IA NAG + VV+ +V S N G+NAATG Y D+ AGI+DP KV R +++A SVA L ++ V +IKE +PAMP+ M G Sbjct: 345 VNQIKAEISNTTSDYDREKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALSATRAAVEEGIVIGGGAALIKASKKVN-----LDLTGDERIGADIVLRAISAPLKQIAINAGFDAGVVANEVEKSSNENLGFNAATGEYVDMFEAGIVDPAKVERVAMQNAVSVASLLLTTEATVSDIKEDKPAMPSMPDMGGMG 539
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH60_ALKOO (60 kDa chaperonin OS=Alkaliphilus oremlandii (strain OhILAs) GN=groL PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.623e-44 Identity = 96/192 (50.00%), Postives = 133/192 (69.27%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAG 578 V QI+ IE D+++EKL ER+AKLSGGVAVIQVGA TETELKE+KLR+EDALNAT+A +L+ + V+A+ ET + D E+ G I++RAL PL+ IA NAG+ GSV+ EKV+SS+ G++A T Y +++ AGI+DPTKV R L++A+SV+ L ++ +V+IK EP+MP G Sbjct: 344 VNQIKRQIEETTSDFDKEKLQERLAKLSGGVAVIQVGAATETELKERKLRIEDALNATRAGVEEGMVAGGGASLVHVIPAVEALLETTEGD-ERTGVKIIRRALEEPLRQIAANAGLEGSVIVEKVMSSEK-GIGFDALTEKYVNMIEAGIVDPTKVTRSALQNAASVSAMLLTTEGAIVDIKSDEPSMPGG 533 The following BLAST results are available for this feature:
BLAST of FC923635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923635 ID=FC923635; Name=FC923635; organism=Citrus clementina; type=EST; length=706bpback to top |