FC923635
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH602_SYNPW (60 kDa chaperonin 2 OS=Synechococcus sp. (strain WH7803) GN=groL2 PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.623e-44 Identity = 94/200 (47.00%), Postives = 134/200 (67.00%), Query Frame = 3 Query: 9 QIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYGY 608 QI+ ++ E Y++EKL ER+AKL+GGVAV++VGA TETE+K+KKLR+EDA+NATKAA TL L+ ++ + + EE +GA+IV AL PL IA+NAGVNG+VV+E V + + GYNAA G+Y D++AAGI+DP KV R L++A+S+A L ++C+V ++ E + A PAG M + Y Sbjct: 346 QIKKQMDETESTYDKEKLQERLAKLAGGVAVVKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPALEQWAASTLSGEELIGANIVAAALTAPLMRIAENAGVNGAVVAENV-KAKSFNEGYNAANGDYVDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADLPEKKEAAPAGGGMGGGDFDY 544
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH601_SYNS9 (60 kDa chaperonin 1 OS=Synechococcus sp. (strain CC9902) GN=groL1 PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.623e-44 Identity = 94/200 (47.00%), Postives = 134/200 (67.00%), Query Frame = 3 Query: 9 QIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYGY 608 QI+ ++ + Y++EKL ER+AKL+GGVAV++VGA TETE+K+KKLR+EDA+NATKAA TL L+ ++ + EE +GA+IV AL PL IA+NAG NG+VV+E V S N++ GYNAA G+Y D++AAGI+DP KV R L++A+S+A L ++C+V ++ E + A PAG M + Y Sbjct: 346 QIKKQMDETDSTYDKEKLQERLAKLAGGVAVVKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPALEEWANGNLSGEELIGANIVAAALTAPLMRIAENAGANGAVVAENVKSRSNNE-GYNAANGDYVDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADLPEKKDAAPAGGGMGGGDFDY 544
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH601_ANAVT (60 kDa chaperonin 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=groL1 PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.623e-44 Identity = 97/202 (48.02%), Postives = 131/202 (64.85%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYGY 608 V QIR +E E Y++EKL ER+AKLSGGVAV++VGA TETE+K+KKLR+EDA+NATKAA TL L+ +++ + DEE GA IV RAL PLK IA+NAG NG+V++E+V G+NAAT + D+ AGI+DP KV R L++A+S+A L ++C+VV+ EP+ A PAG + Y Sbjct: 344 VEQIRRQMEETESSYDKEKLQERLAKLSGGVAVVKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLTPELEVWANSNLKDEELTGALIVARALPAPLKRIAENAGQNGAVIAERV-KEKAFNVGFNAATNEFVDMFEAGIVDPAKVTRSALQNAASIAGMVLTTECIVVDKPEPKDAAPAGAGAGGGDFDY 544
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH601_SYNPW (60 kDa chaperonin 1 OS=Synechococcus sp. (strain WH7803) GN=groL1 PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 3.426e-44 Identity = 101/200 (50.50%), Postives = 132/200 (66.00%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPA-MPAGNPMDNSG 599 VA IR +EN++ +Y+REKLNERIAKL+GGVAVI+VGA TETELK +KLR+EDALNAT+AA TL++L+ +D + L D ++ G +IV RAL PL+ IA NAG NG VV E+V S G+NA TG YE+L+ AGI+D KVVR L+ A S+A + ++ VV + EP A P G+PM G Sbjct: 344 VASIRRELENSDSEYDREKLNERIAKLAGGVAVIKVGAPTETELKNRKLRIEDALNATRAAVEEGIVAGGGSTLIQLAGSLDGLANQLHGD-QRTGVEIVHRALSAPLRQIAINAGANGDVVVEQVQRSGQ---GFNALTGGYENLLEAGILDAAKVVRLGLQDAVSIASLLITTEVVVADKPEPPAAPAPGGDPMGGMG 539
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH602_ROSDO (60 kDa chaperonin 2 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=groL2 PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 4.474e-44 Identity = 96/201 (47.76%), Postives = 132/201 (65.67%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 605 VAQIRT IE DY+REKL ER+AKL+GGVAVI+VG TE E+KE+K RV+DALNAT+AA L++ ++ + T DN+++ VG IV++AL PL+ IA+NAGV+GSVV+ K+ SD+ K+G+NA T Y D+ A G+IDP KVVR L+ A+S+A + ++ +V + E A P G D G G Sbjct: 346 VAQIRTQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEVEVKERKDRVDDALNATRAAVQEGIVVGGGVALVQAGKHLEGL--TGDNNDQNVGISIVRKALEAPLRQIAENAGVDGSVVAGKIRESDDLKFGFNAQTEEYGDMFAFGVIDPAKVVRTALQDAASIAGLLITTEAMVADRPAKEGAAPGGGMPDMGGMG 544
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH60_RUBXD (60 kDa chaperonin OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=groL PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 5.844e-44 Identity = 97/192 (50.52%), Postives = 130/192 (67.71%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAG 578 + QI+ +E + D++REKL ER+AKL+GGVAVI+VGA TETELKEKK RVEDAL+AT+AA LL+ V + + LD D E+ GA IV RAL P++ IA+NAG +GS+V +KV + G+NA TG YEDL+AAG+IDP V R L++A+S+A + +D VV E +E +PAMP G Sbjct: 345 INQIKAELETTDSDFDREKLQERLAKLAGGVAVIKVGAATETELKEKKHRVEDALSATRAALEEGIVPGGGVALLKAQKAVGELLDELDGD-ERTGARIVYRALEEPIRQIAENAGADGSIVVDKV-RAQGDSIGFNALTGGYEDLVAAGVIDPAMVTRSALQNAASIAGLLVTTDVVVAEPEEEQPAMPGG 534
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH602_SYNS9 (60 kDa chaperonin 2 OS=Synechococcus sp. (strain CC9902) GN=groL2 PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 5.844e-44 Identity = 101/201 (50.25%), Postives = 133/201 (66.17%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAG--NPMDNSG 599 VA I+ ++ E DY+REKLNERIAKL+GGVAVI+VGA TETELK +KLR+EDALNAT+AA TLL+L+ ++A+ LD D ++ G +IV+R+L P+ IA NAG NG VV E + S G+NA TG YEDLMA GI+D TKVVR ++ A S+A + ++ V+ + EPEP AG +PM G Sbjct: 344 VAAIKRELDATESDYDREKLNERIAKLAGGVAVIKVGAATETELKNRKLRIEDALNATRAAVEEGIVAGGGSTLLQLAEDLNALAAQLDGD-QRTGVEIVQRSLTAPVHQIATNAGHNGDVVIETMRQSGQ---GFNALTGVYEDLMATGIVDATKVVRLAVQDAVSIASLLVTTEVVIADKPEPEPPAGAGGEDPMGGMG 540
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH601_PROMA (60 kDa chaperonin 1 OS=Prochlorococcus marinus GN=groL1 PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 5.844e-44 Identity = 97/204 (47.55%), Postives = 135/204 (66.18%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPA-----GNPMDNSG 599 VA I+ ++ + DY++EKLNERIAKL+GGVAVI+VGA TETELK +KLR+EDALNAT+AA TL++L ++D++ ++LD D + G DI+K+AL P K IA NAG NG VV ++ G+NAATG YEDL++AGIID KV+R L+ A S+A + ++ ++ + +PEP PA G+PM G Sbjct: 344 VASIKRELDQTDSDYDKEKLNERIAKLAGGVAVIKVGAPTETELKNRKLRIEDALNATRAAVEEGIVAGGGSTLIKLGEELDSLSKSLDGD-QATGVDIIKKALSAPAKQIALNAGENGDVVVSEIQRLGK---GFNAATGQYEDLISAGIIDAVKVIRLALQDAVSIASLLITTEVIIAD--KPEPPSPAGGEGGGDPMGGMG 541
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH602_ANADE (60 kDa chaperonin 2 OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=groL2 PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 7.632e-44 Identity = 100/199 (50.25%), Postives = 125/199 (62.81%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 599 V IR IE DY+REKL ER+AKL GGVAVI VGA TETE+KEKK RVEDAL+AT+AA LR ++ +K N+ EKVG DIV+RA+ PL+ I+ N G GS+V KV + +G+NAATG YEDL+ AG+IDPTKV R L++A+SVA L + +V E + E A PAG M G Sbjct: 346 VKTIRAQIEETTSDYDREKLQERLAKLVGGVAVINVGAATETEMKEKKARVEDALHATRAAVEEGIVPGGGVAYLRCVKALEGVKV---NEGEKVGLDIVRRAIEEPLRQISGNGGYEGSIVVNKVKEAKEAAFGFNAATGEYEDLVKAGVIDPTKVSRSALQNAASVASLMLTTMAMVAEKPKEESAAPAGGGMGGMG 541
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH601_NITWN (60 kDa chaperonin 1 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=groL1 PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 7.632e-44 Identity = 94/198 (47.47%), Postives = 131/198 (66.16%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVE--IKEPEPAMPAGNPMD 590 V QI+ IE DY+REKL ER+AKL+GGVAVI+VG TE E+KE+K RV+DA++AT+AA LLR +DA+K DN ++K G DIV+RA+ P + I +NAG +GS+V K+L + + +G+NAATG Y+DL+ G+IDP KVVR L+ A+SVA + ++ +V E K+ PA+P G MD Sbjct: 346 VTQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVEEGILPGGGVALLRALKALDAVKP--DNPDQKAGVDIVRRAIQVPARQIIQNAGEDGSLVVGKLLEKNTYNWGFNAATGEYQDLVGVGVIDPAKVVRTALQDAASVASLLITTEALVAEKPKKDVAPALPPGGGMD 541 The following BLAST results are available for this feature:
BLAST of FC923635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923635 ID=FC923635; Name=FC923635; organism=Citrus clementina; type=EST; length=706bpback to top |