FC923635
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH60_SHESH (60 kDa chaperonin OS=Shewanella sediminis (strain HAW-EB3) GN=groL PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.318e-39 Identity = 91/201 (45.27%), Postives = 127/201 (63.18%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 605 VAQI+ E + DY++EKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R++SK+ ++ + N+++K G I RA+ PL+ IA NAG GSVV+ V + + YGYNA Y D++ GI+DPTKV R L+ A+S+A + ++ +V E+KE PA G G G Sbjct: 346 VAQIKIQAEESTSDYDKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALVRVASKIAEVE--VINEDQKHGVVIALRAMEAPLRQIAANAGEEGSVVANNVKNGSGN-YGYNAGNDTYGDMLEMGILDPTKVTRSALQFAASIAGLMITTEAMVGEVKEDAPAGDMGGMGGMGGMG 543
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH60_SHEHH (60 kDa chaperonin OS=Shewanella halifaxensis (strain HAW-EB4) GN=groL PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.318e-39 Identity = 90/199 (45.23%), Postives = 126/199 (63.32%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 599 VAQI+ E + DY++EKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R++SK+ ++ + N+++K G I RA+ PL+ IA NAG GSVV+ V + + YGYNA Y D++ GI+DPTKV R L+ ASS+A + ++C+V ++KE M M G Sbjct: 346 VAQIKIQAEESTSDYDKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALVRVASKIGEVE--VLNEDQKHGVIIALRAMEAPLRQIATNAGEEGSVVANNVKNGTGN-YGYNAGNDTYGDMLEMGILDPTKVTRSALQFASSIAGLMITTECMVADVKEDAADMGGMGGMGGMG 541
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH60_NITMU (60 kDa chaperonin OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=groL PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.318e-39 Identity = 92/188 (48.94%), Postives = 118/188 (62.77%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPA 566 V QIR IE A DY++EKL ER+AKL+GGVA+I+VGA TE E+KEKK RVEDAL+AT+AA LLR S V +K DN ++ G IV RAL PL+ I N G SVV KVL +GYNAA+ Y D++ G++DPTKV R L+HA+S+A L +D +V E+ + E A Sbjct: 346 VKQIRAQIEEATSDYDKEKLQERVAKLAGGVALIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALLRTRSAVSNLKG--DNHDQDAGIKIVLRALEEPLRQIVANCGDEPSVVINKVLEG-TENFGYNAASSEYGDMVQMGVLDPTKVTRYALQHAASIAGLMLTTDALVAEVPKEEGA 530
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH60_KLEPN (60 kDa chaperonin OS=Klebsiella pneumoniae GN=groL PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.318e-39 Identity = 91/200 (45.50%), Postives = 129/200 (64.50%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI-KEPEPAMPAGNPMDNSG 599 VAQIR IE A DY+REKL ER+AK++GGVAVI+VGA TE E+KEKK RV+DAL+AT+AA L+R+++K+ + T N+++ VG + RA+ PL+ I NAG SVV+ V + D + YGYNAAT Y +++ GI+DPTKV R L++A+SVA + ++C+V ++ K P + A M G Sbjct: 345 VAQIRKQIEEATSDYDREKLQERVAKVAGGVAVIKVGAATEVEMKEKKARVDDALHATRAAVEEGVVAGGGVALVRVAAKLAGL--TGQNEDQNVGIKVALRAMEAPLRQIVSNAGEEPSVVANNVKAGDGN-YGYNAATEEYGNMIDFGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKSDAPDLGAAGGMGGMG 541
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH60_KLEPL (60 kDa chaperonin (Fragment) OS=Klebsiella planticola GN=groL PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.318e-39 Identity = 92/196 (46.94%), Postives = 126/196 (64.29%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI-KEPEPAMPAGNPM 587 V QIR IE A DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R++SK+ +K N+++ VG + RA+ PL+ I N G SVV+ V S D + YGYNAAT Y +++ GI+DPTKV R L++A+SVA + ++C+V ++ K P + A M Sbjct: 346 VTQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKIAELKG--QNEDQNVGIKVALRAMESPLRQIVLNCGEEPSVVANTVKSGDGN-YGYNAATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKGDAPDLGAAGGM 538
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH60_ESCF3 (60 kDa chaperonin OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=groL PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.318e-39 Identity = 89/188 (47.34%), Postives = 125/188 (66.49%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPA 566 VAQIR IE A DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R++SK+ ++ N+E+ VG + RA+ PL+ I N G SVV+ V + D + YGYNAAT Y +++ GI+DPTKV R L++A+SVA + ++C+V ++ + + A Sbjct: 346 VAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRG--QNEEQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKAGDGN-YGYNAATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKNDAA 530
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH60_CLOBL (60 kDa chaperonin OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=groL PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.318e-39 Identity = 92/198 (46.46%), Postives = 129/198 (65.15%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE--PAMPAGNPMD 590 V+QIR IE+ ++++EKL ER+AKL+GGVAVI+VGA TETELKE+KLR+EDAL ATKAA + + K+ + T D + K+G DI+++AL P++ IA NAG GSV+ EKV +++ GY+A Y D++ GI+DPTKV R L++A+S+A TFL ++ V +I E E P M G MD Sbjct: 344 VSQIRVQIEDTTSEFDKEKLQERLAKLAGGVAVIRVGAATETELKEEKLRIEDALAATKAAVEEGIVPGGGTAYIDIIPKIADL--TSDIIDVKLGIDIIRKALEEPVRQIANNAGAEGSVIIEKVKATE-AGVGYDALNDKYVDMLKTGIVDPTKVTRSALQNAASIASTFLTTEAAVADIPEKENTPPMAPGMGMD 538
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH60_CLOBK (60 kDa chaperonin OS=Clostridium botulinum (strain Okra / Type B1) GN=groL PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.318e-39 Identity = 92/198 (46.46%), Postives = 129/198 (65.15%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE--PAMPAGNPMD 590 V+QIR IE+ ++++EKL ER+AKL+GGVAVI+VGA TETELKE+KLR+EDAL ATKAA + + K+ + T D + K+G DI+++AL P++ IA NAG GSV+ EKV +++ GY+A Y D++ GI+DPTKV R L++A+S+A TFL ++ V +I E E P M G MD Sbjct: 344 VSQIRVQIEDTTSEFDKEKLQERLAKLAGGVAVIRVGAATETELKEEKLRIEDALAATKAAVEEGIVPGGGTAYIDIIPKIADL--TSDIIDVKLGIDIIRKALEEPVRQIANNAGAEGSVIIEKVKATE-AGVGYDALNDKYVDMLKTGIVDPTKVTRSALQNAASIASTFLTTEAAVADIPEKENTPPMAPGMGMD 538
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH60_CLOBJ (60 kDa chaperonin OS=Clostridium botulinum (strain Kyoto / Type A2) GN=groL PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.318e-39 Identity = 92/198 (46.46%), Postives = 129/198 (65.15%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE--PAMPAGNPMD 590 V+QIR IE+ ++++EKL ER+AKL+GGVAVI+VGA TETELKE+KLR+EDAL ATKAA + + K+ + T D + K+G DI+++AL P++ IA NAG GSV+ EKV +++ GY+A Y D++ GI+DPTKV R L++A+S+A TFL ++ V +I E E P M G MD Sbjct: 344 VSQIRVQIEDTTSEFDKEKLQERLAKLAGGVAVIRVGAATETELKEEKLRIEDALAATKAAVEEGIVPGGGTAYIDIIPKIADL--TSDIIDVKLGIDIIRKALEEPVRQIANNAGAEGSVIIEKVKATE-AGVGYDALNDKYVDMLKTGIVDPTKVTRSALQNAASIASTFLTTEAAVADIPEKENTPPMAPGMGMD 538
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH60_CLOBH (60 kDa chaperonin OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=groL PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.318e-39 Identity = 92/198 (46.46%), Postives = 129/198 (65.15%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE--PAMPAGNPMD 590 V+QIR IE+ ++++EKL ER+AKL+GGVAVI+VGA TETELKE+KLR+EDAL ATKAA + + K+ + T D + K+G DI+++AL P++ IA NAG GSV+ EKV +++ GY+A Y D++ GI+DPTKV R L++A+S+A TFL ++ V +I E E P M G MD Sbjct: 344 VSQIRVQIEDTTSEFDKEKLQERLAKLAGGVAVIRVGAATETELKEEKLRIEDALAATKAAVEEGIVPGGGTAYIDIIPKIADL--TSDIIDVKLGIDIIRKALEEPVRQIANNAGAEGSVIIEKVKATE-AGVGYDALNDKYVDMLKTGIVDPTKVTRSALQNAASIASTFLTTEAAVADIPEKENTPPMAPGMGMD 538 The following BLAST results are available for this feature:
BLAST of FC923635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923635 ID=FC923635; Name=FC923635; organism=Citrus clementina; type=EST; length=706bpback to top |