FC923635
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH601_ERYLH (60 kDa chaperonin 1 OS=Erythrobacter litoralis (strain HTCC2594) GN=groL1 PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.700e-43 Identity = 96/193 (49.74%), Postives = 132/193 (68.39%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI-KEPEPA-MPA 575 V+QIR IE DY+REKL ER+AKL+GGVAVI+VG TE E+KE+K RV+DAL+AT+AA LLR +D +K ND+++ G DIV+RAL P + IA+NAG +G+ + K+L D++ +G+NAATG YEDL+ +G+IDP KVVR L+ A+SVA + ++ +V E+ KE PA MPA Sbjct: 346 VSQIRAQIETTTSDYDREKLQERVAKLAGGVAVIRVGGATEVEVKERKDRVDDALHATRAAVEEGILPGGGIALLRALKSLDGLKAA--NDDQQSGIDIVRRALRAPARQIAENAGEDGAYIVGKLLEGDDYNHGFNAATGEYEDLVKSGVIDPAKVVRTALQDAASVASLLITTEALVAELPKEDTPAPMPA 536
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH602_PROM1 (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain NATL1A) GN=groL2 PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.221e-43 Identity = 93/193 (48.19%), Postives = 132/193 (68.39%), Query Frame = 3 Query: 9 QIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPM 587 QI+ ++ + Y++EKL ER+AKLSGGVAV++VGA TETE+K+KKLR+EDA+NATKAA TL L+ ++ T + EE +GA+IV+ AL PL IA+NAG NG+VV+E V S + GYNAATG Y D+++AGI+DP KV R L++A+S+A L ++C+V ++ E + + PAG M Sbjct: 346 QIKKQMDETDSTYDKEKLQERLAKLSGGVAVVKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPALEDWSSTNLSGEELIGANIVEAALTSPLMRIAENAGANGAVVAENVKSKPVND-GYNAATGEYVDMLSAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADLPEKKDSSPAGGGM 537
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH602_GLUDA (60 kDa chaperonin 2 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=groL2 PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.221e-43 Identity = 92/190 (48.42%), Postives = 130/190 (68.42%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMP 572 V QIR IE DY+REKL ER+AKL+GGVA+I+VG TE E+KE+K RV+DALNAT+AA L R + V ++ ND++++G DIV++AL PL+ IA+NAG +G+VV+ KVL + + +G++A G ++DL+AAGIIDPTKVVR L+ A+SV + ++ +V E EP+PA P Sbjct: 346 VGQIRAQIEETTSDYDREKLQERLAKLAGGVAIIRVGGSTEIEVKERKDRVDDALNATRAAVEEGIVPGGGTALARAAEVVARLQ--FHNDDQRIGGDIVRKALQAPLRQIAENAGEDGAVVAGKVLENGAYNFGFDAQIGEFKDLVAAGIIDPTKVVRTALQDAASVGSLLITTEVLVTEKAEPKPAAP 533
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: RUBA_WHEAT (RuBisCO large subunit-binding protein subunit alpha, chloroplastic (Fragment) OS=Triticum aestivum PE=1 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.900e-43 Identity = 93/187 (49.73%), Postives = 130/187 (69.52%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEP 563 VAQ++ + + Y+ EKL ERIAKLSGGVAVI+VGA TETEL++++LR+EDA NAT AA + LS+ V AIKET+++ +E++GADI+++AL P LIA NAGV G VV EK+ S+ + GYNA T YE+L+ +G+IDP KV RC L++A+SV+ L + +VVE +P+P Sbjct: 346 VAQLKKELSETDSIYDSEKLAERIAKLSGGVAVIKVGATTETELEDRQLRIEDAKNATFAAIEEGIVPGGGAAYVHLSTYVPAIKETIEDHDERLGADIIQKALQAPASLIANNAGVEGEVVIEKIKESE-WEMGYNAMTDKYENLIESGVIDPAKVTRCALQNAASVSGMVLTTQAIVVEKPKPKP 531
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH60_THEM4 (60 kDa chaperonin OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=groL PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.900e-43 Identity = 98/195 (50.26%), Postives = 127/195 (65.13%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE-----PAMP 572 +AQI+ IE +YE+E L ER+AKL+GGVAVI+VGA TETELKEKK R+EDAL+AT+AA TLLR V+ I E LD D EK+GA IV AL P+ IAKNAG +G+++ KVL D+ YG++A G Y D+ GIIDP KV R L++A+S+A L ++ +VVE EP+ P MP Sbjct: 344 IAQIKAQIEQTTSEYEKETLQERMAKLAGGVAVIKVGAATETELKEKKHRIEDALSATRAAVEEGIVPGGGITLLRARKPVEKIVEELDGD-EKIGAKIVYEALSAPINQIAKNAGYDGAIIIHKVLEQDDPAYGFDALKGEYCDMFERGIIDPAKVTRSALQNAASIAGMLLTTEVLVVEKPEPKNNNPMPEMP 537
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH60_DESDG (60 kDa chaperonin OS=Desulfovibrio desulfuricans (strain G20) GN=groL PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.900e-43 Identity = 99/200 (49.50%), Postives = 126/200 (63.00%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVE-IKEPEPAMPAGNPMDNSG 599 V IR IE DY+REKL ER+AK+ GGVAVI VGA TETE+KEKK RVEDALNAT+AA L+R +D +K +D+E G I++RA+ PL+ IA NAG GS++ EKV +G+NAATG +EDL+AAG+IDP KV R L++A+SVA L ++C + E KE PA PA M G Sbjct: 346 VKMIRAQIEETSSDYDREKLQERLAKIVGGVAVINVGAATETEMKEKKDRVEDALNATRAAVEEGIVPGGGTALVRCCKVLDDVKPA--DDDEAAGVTIIRRAIEEPLRQIAANAGFEGSIICEKV-KEGKDAFGFNAATGEFEDLIAAGVIDPKKVSRIALQNAASVASLLLTTECAIAEKPKEDAPAAPAMGGMGGMG 542
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH60_AZOPC (60 kDa chaperonin OS=Azobacteroides pseudotrichonymphae genomovar. CFP2 GN=groL PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.900e-43 Identity = 96/199 (48.24%), Postives = 131/199 (65.83%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 599 V+QI+T IE DY+ EKL ER+AKL+GGVAV+ VGA +E E+KEKK RV+DAL+AT+AA +R S ++ K N++E G +IVKRA+ PL+ I +NAG G+V++++V + +GYNA TG YEDL AG+IDPTKV R LE+A+S+A L ++CV+ E+KE PA PA PM G Sbjct: 346 VSQIKTQIEKTTSDYDSEKLQERLAKLAGGVAVLYVGAPSEVEMKEKKDRVDDALSATRAAIEEGTVPGGGVAYVRAISILEGFKGI--NEDETTGIEIVKRAIEEPLRQIVENAGKEGAVIAQRV-KEEKDDFGYNARTGIYEDLYVAGVIDPTKVARVALENAASIAGMLLTTECVITEVKEENPA-PAMPPMGGGG 540
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH60_AQUAE (60 kDa chaperonin OS=Aquifex aeolicus GN=groL PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.900e-43 Identity = 95/187 (50.80%), Postives = 129/187 (68.98%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHK---YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKE 554 + QI+ I+ DY+REKL ER+AKLSGGVA+I+VGA TE ELKEKK RVEDA++ATKAA L+R S ++ +K DN ++++G DI+K+A+ PLK IA NAG +GSVV EKV+ K +G+NAATG Y D+ AGIIDPTKVVR +E+A+SVA T L ++ ++ ++ E Sbjct: 346 IEQIKRQIQETTSDYDREKLQERLAKLSGGVAIIRVGAATEAELKEKKYRVEDAVHATKAAVEEGIVPGGGVALVRASEALEDLKG--DNHDQQLGIDIIKKAVRTPLKQIAYNAGYDGSVVLEKVIELGKEKGVSWGFNAATGEYVDMYEAGIIDPTKVVRTAIENAASVAGTMLTAEALIADLPE 530
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH60_ALKMQ (60 kDa chaperonin OS=Alkaliphilus metalliredigens (strain QYMF) GN=groL PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.900e-43 Identity = 95/192 (49.48%), Postives = 128/192 (66.67%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAG 578 V+QI+ IE D+++EKL ER+AKLSGGVAVIQVGA TETELKE+KLR+EDALNAT+AA L+ + V+A+ E D EK G I++RAL PL+ IA+NAG+ GSV+ KV+SSD GY+ Y +++ AGI+DPTKV R L++A+S++ L ++ VV+I EP MP G Sbjct: 344 VSQIKKQIEETTSDFDKEKLQERLAKLSGGVAVIQVGAATETELKERKLRIEDALNATRAAVEEGIVAGGGTALVNVIPAVEALLEGSQGD-EKTGIQIIRRALEEPLRQIAENAGLEGSVIVNKVMSSDK-GIGYDVLNNKYVNMIEAGIVDPTKVTRSALQNAASISAMLLTTESAVVDIASEEPGMPGG 533
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH602_NITWN (60 kDa chaperonin 2 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=groL2 PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.900e-43 Identity = 92/195 (47.18%), Postives = 132/195 (67.69%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI---KEPEPAMPAG 578 VAQI+ IE DY+REKL ER+AKL+GGVAVI+VG TE E+KE+K RV+DA++AT+AA LLR S ++ IK ND++K G +IV++AL P + IA NAG +GSV+ K+L + + YG+++ TG+Y +L++ GIIDPTKVVR +++A+SVA + ++ +V E+ P PAMP G Sbjct: 346 VAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVEEGIVPGGGVALLRASEQLKRIKT--QNDDQKTGVEIVRKALSAPARQIAINAGEDGSVIVGKILEKEQYSYGFDSQTGDYGNLISKGIIDPTKVVRTAIQNAASVASLLITTEAMVAELPKKNSPAPAMPGG 538 The following BLAST results are available for this feature:
BLAST of FC923635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923635 ID=FC923635; Name=FC923635; organism=Citrus clementina; type=EST; length=706bpback to top |