FC923635
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH60_BACV8 (60 kDa chaperonin OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=groL PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 4.947e-43 Identity = 94/194 (48.45%), Postives = 128/194 (65.98%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNP 584 + QI+ I+N DY++EKL ER+AKLSGGVAV+ VGA +E E+KEKK RV+DAL AT+AA +R S ++ +K DN++E G +I+KRA+ PL+ I NAG G+VV +KV +GYNA T YE+L AAG++DP KV R LE+A+S+A FL ++CV+VE KE +P MP G P Sbjct: 346 INQIKAEIKNTTSDYDKEKLQERLAKLSGGVAVLYVGAASEVEMKEKKDRVDDALCATRAAIEEGIVPGGGVAYIRASEALEGLKG--DNEDETTGIEIIKRAIEEPLRQIVANAGKEGAVVVQKVREGKG-DFGYNARTDVYENLHAAGVVDPAKVTRVALENAASIAGMFLTTECVIVEKKEDKPEMPMGAP 536
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH602_RHILE (60 kDa chaperonin 2 OS=Rhizobium leguminosarum GN=groL2 PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 4.947e-43 Identity = 96/198 (48.48%), Postives = 127/198 (64.14%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVE--IKEPEPAMPAGNPMD 590 VAQI+ IE DY+REKL ER+AKL+GGVAVI+VG TE E+KEKK RV+DAL+AT+AA LLR +DA+K N +++VG DIV+RA+ P + IA+NAG GSV+ K+ YG+NA TG Y DL A G+IDP KVVR L+ A+S+A + ++ ++ E K+ P MPAG MD Sbjct: 346 VAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRVDDALHATRAAVEEGILPGGGVALLRAVKALDAVKTA--NGDQRVGVDIVRRAVEAPARQIAENAGAEGSVIVGKLREKSEFSYGWNAQTGEYGDLYAQGVIDPAKVVRTALQDAASIAGLLVTTEAMIAEKPKKDAPPPMPAGPGMD 541
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH601_SORC5 (60 kDa chaperonin 1 OS=Sorangium cellulosum (strain So ce56) GN=groL1 PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 4.947e-43 Identity = 98/201 (48.76%), Postives = 133/201 (66.17%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 605 + IR I + DY+REKL ER+AKL+GGVAV++VGA TETE+KEKK RVEDAL+AT+AA L R ++ ++++K NDE VG +V+RA+ PL+ IA+NAGV+G+VV+EKV S +GYNAAT +YEDL+A G+IDP KVVR + +A+SVA L ++ +V E + E A G P G G Sbjct: 346 IEAIRKQIADTTSDYDREKLQERLAKLAGGVAVVKVGAATETEMKEKKARVEDALHATRAAVEEGIVVGGGVALFRAAASLESLK---FNDERDVGVRLVRRAVEAPLRQIAQNAGVDGTVVAEKV-RSGAPTFGYNAATDSYEDLLAGGVIDPAKVVRHAISNAASVAALMLTTEALVAEKPKKEKAAAGGAPGGMGGMG 542
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH60_THESQ (60 kDa chaperonin OS=Thermotoga sp. (strain RQ2) GN=groL PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 6.461e-43 Identity = 93/191 (48.69%), Postives = 130/191 (68.06%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPA 575 +AQI+ IE +YE+E L ER+AKL+GGVAVI+VGA TETELKEKK R+EDAL+AT+AA TLLR V+ + E L+ D EK+GA IV +AL P+K IA+NAG +G+V+ EK+LS+D+ YG++A G Y ++ GIIDP KV R L++A+S+A L ++ ++VE E + P+ Sbjct: 344 IAQIKAQIEETTSEYEKETLQERMAKLAGGVAVIKVGAATETELKEKKHRIEDALSATRAAVEEGIVPGGGVTLLRARKAVEKVIEELEGD-EKIGAQIVYKALSAPIKQIAENAGYDGAVIIEKILSNDDPAYGFDALRGEYCNMFERGIIDPAKVTRSALQNAASIAGMLLTTEVLIVEKPEEKKETPS 533
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH60_THEP1 (60 kDa chaperonin OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=groL PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 6.461e-43 Identity = 93/191 (48.69%), Postives = 130/191 (68.06%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPA 575 +AQI+ IE +YE+E L ER+AKL+GGVAVI+VGA TETELKEKK R+EDAL+AT+AA TLLR V+ + E L+ D EK+GA IV +AL P+K IA+NAG +G+V+ EK+LS+D+ YG++A G Y ++ GIIDP KV R L++A+S+A L ++ ++VE E + P+ Sbjct: 344 IAQIKAQIEETTSEYEKETLQERMAKLAGGVAVIKVGAATETELKEKKHRIEDALSATRAAVEEGIVPGGGVTLLRARKAVEKVIEELEGD-EKIGAQIVYKALSAPIKQIAENAGYDGAVIIEKILSNDDPAYGFDALRGEYCNMFERGIIDPAKVTRSALQNAASIAGMLLTTEVLIVEKPEEKKETPS 533
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH60_DESDA (60 kDa chaperonin OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=groL PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 6.461e-43 Identity = 100/201 (49.75%), Postives = 131/201 (65.17%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 605 V QIR IE++ DY+REKL ER+AKL GGVAV+ VGA TE E+KEKK RVEDALNAT+AA L+R++ + IK +D+E G +I++RA+ PL+ IA NAG GS+V EKV + +G+NAATG YEDL+ AG+IDP KV R L++A+SVA L ++C + E +PEP A P D G G Sbjct: 346 VKQIRAQIEDSTSDYDREKLQERLAKLVGGVAVVHVGAATEVEMKEKKDRVEDALNATRAAVEEGIVPGGGTALIRVAKVLCDIKPA--DDDELAGVNIIRRAIEEPLRQIALNAGFEGSIVVEKVREGKD-GFGFNAATGEYEDLIKAGVIDPKKVTRTALQNAASVASLLLTTECAIAE--KPEPKKDAAMP-DMGGMG 540
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH60_CUPTR (60 kDa chaperonin OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=groL PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 6.461e-43 Identity = 99/194 (51.03%), Postives = 125/194 (64.43%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI--KEPEPAMPAG 578 V QIR IE A DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA LLR + + A++ DN ++ G IV RA+ PL+ I NAG SVV KV+ + YGYNAA+G Y DL+ G++DPTKV R L++A+SVA L +DC V E +E PAMP G Sbjct: 346 VKQIRAQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALLRARAAISALQG--DNADQNAGIKIVLRAMEEPLRQIVLNAGEEASVVVAKVIEGKGN-YGYNAASGEYGDLVEMGVLDPTKVTRTALQNAASVASLMLTTDCAVAETPKEESAPAMPGG 536
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH60_ACIBL (60 kDa chaperonin OS=Acidobacteria bacterium (strain Ellin345) GN=groL PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 6.461e-43 Identity = 95/192 (49.48%), Postives = 126/192 (65.62%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAG 578 V +IR+ +E DY+REKL ER+AKL GGVAVI+VGA TETE+KEKK RVEDA++AT+AA L+R VDA+K T D E +GA+I+KRAL PL+ I NAG G++V K+ + YGYNA T Y DL+ AG+IDPTKV R L++A S+A L ++ ++ EI E + + PAG Sbjct: 355 VKEIRSQVEKTTSDYDREKLQERLAKLVGGVAVIKVGAATETEMKEKKARVEDAMHATRAAVEEGIVPGGGVALIRCVEAVDALKLTGD---EGIGANIIKRALEEPLRQIVGNAGEEGAIVVGKIRDHKDPHYGYNAQTSEYVDLVKAGVIDPTKVTRTALQNAGSIAGLMLTTEALISEIPEEKKSEPAG 543
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH605_SINMW (60 kDa chaperonin 5 OS=Sinorhizobium medicae (strain WSM419) GN=groL5 PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 6.461e-43 Identity = 95/193 (49.22%), Postives = 125/193 (64.77%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI-KEPEPAMPAG 578 VAQI+ IE DY+REKL ER+AKL+GGVAVI+VG TE E+KEKK R++DALNAT+AA LLR S K+ E ND++ G +IV+RAL P + I +NAG S+V K+L D +GYNA TG Y D++A GIIDP KVVR L+ A+SVA + ++ ++ E+ K+ PAMP G Sbjct: 346 VAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRIDDALNATRAAVQEGIVPGGGVALLRSSVKITVKGE---NDDQDAGVNIVRRALQSPARQIVENAGDEASIVVGKILEKDTDDFGYNAQTGEYGDMIAMGIIDPVKVVRTALQDAASVASLLITTEAMIAELPKKDAPAMPGG 535
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH602_SYNPX (60 kDa chaperonin 2 OS=Synechococcus sp. (strain WH8102) GN=groL2 PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 6.461e-43 Identity = 98/201 (48.76%), Postives = 133/201 (66.17%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE--PAMPAGNPMDNSG 599 VA I+ ++ + DY+REKLNERIAKL+GGVAVI+VGA TETELK +KLR+EDALNAT+AA TLL+L+ ++ + E L+ D ++ G +I++RAL P+ IA NAG NG VV E + +S G+NA TG YEDLMAAGI+D KVVR ++ A S+A + ++ V+ + EPE P G+PM G Sbjct: 344 VAAIKRELDATDSDYDREKLNERIAKLAGGVAVIKVGAPTETELKNRKLRIEDALNATRAAIEEGIVPGGGTTLLQLADGLNGLVEQLEGD-QRTGVEILQRALVAPVHHIATNAGHNGDVVIEAMRNSGQ---GFNALTGTYEDLMAAGIVDAAKVVRLAVQDAVSIASLLITTEVVIADKPEPEAPPVDGGGDPMGGMG 540 The following BLAST results are available for this feature:
BLAST of FC923635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923635 ID=FC923635; Name=FC923635; organism=Citrus clementina; type=EST; length=706bpback to top |