FC923635
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH601_SYNY3 (60 kDa chaperonin 1 OS=Synechocystis sp. (strain PCC 6803) GN=groL1 PE=1 SV=4) HSP 1 Score: 174.096 bits (440), Expect = 6.461e-43 Identity = 99/198 (50.00%), Postives = 132/198 (66.67%), Query Frame = 3 Query: 9 QIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGY 602 QIR IE + Y++EKL ER+AKL+GGVAVI+VGA TETE+K++KLR+EDA+NATKAA TL L+ +++ DEE GA IV RAL PLK IA+NAG NG+V+SE+V + GYNAA+ Y D++AAGI+DP KV R L++A+S+A L ++C+VV+ E E A PAG P + Y Sbjct: 346 QIRRQIEETDSSYDKEKLQERLAKLAGGVAVIKVGAATETEMKDRKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPQLEDWATGNLKDEELTGALIVARALPAPLKRIAENAGQNGAVISERVKEKE-FNVGYNAASLEYVDMLAAGIVDPAKVTRSALQNAASIAGMVLTTECIVVDKPEKEKA-PAGAPGGDFDY 541
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH601_SYNSC (60 kDa chaperonin 1 OS=Synechococcus sp. (strain CC9605) GN=groL1 PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 6.461e-43 Identity = 99/201 (49.25%), Postives = 132/201 (65.67%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPA--GNPMDNSG 599 V+ IR +E E DY+REKL ERIAKL+GGVAVI+VGA TETELK +KLR+EDALNAT+AA TLL+L+ +DA+ +L N +++ G +IV+RAL P+ IA NAG NG VV + SS G+NA +G YEDLMAAGI+D KVVR ++ + S+A + ++ V+ + EP PA G+PM G Sbjct: 344 VSAIRRELEATESDYDREKLQERIAKLAGGVAVIKVGAPTETELKNRKLRIEDALNATRAAVEEGIVAGGGSTLLQLADSLDALASSL-NGDQRTGVEIVQRALTAPIHQIATNAGQNGDVVIAGMRSSGQ---GFNALSGVYEDLMAAGIVDAAKVVRLAVQDSISIASLLITTEVVIADKPEPPAPAPAGDGDPMGGMG 540
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH601_SINMW (60 kDa chaperonin 1 OS=Sinorhizobium medicae (strain WSM419) GN=groL1 PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 6.461e-43 Identity = 95/193 (49.22%), Postives = 125/193 (64.77%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI-KEPEPAMPAG 578 VAQI+ IE DY+REKL ER+AKL+GGVAVI+VG TE E+KEKK R++DALNAT+AA LLR S K+ E ND++ G +IV+RAL P + I +NAG S+V K+L D +GYNA TG Y D++A GIIDP KVVR L+ A+SVA + ++ ++ E+ K+ PAMP G Sbjct: 346 VAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRIDDALNATRAAVQEGIVPGGGVALLRSSVKITVKGE---NDDQDAGVNIVRRALQSPARQIVENAGDEASIVVGKILEKDTDDFGYNAQTGEYGDMIAMGIIDPVKVVRTALQDAASVASLLITTEAMIAELPKKDAPAMPGG 535
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH60_THENE (60 kDa chaperonin OS=Thermotoga neapolitana GN=groL PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.438e-43 Identity = 93/191 (48.69%), Postives = 130/191 (68.06%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPA 575 +AQI+ IE +YE+E L ER+AKL+GGVAVI+VGA TETELKEKK R+EDAL+AT+AA TLLR V+ + E LD D EK+GA IV +AL P++ IA+NAG +G+V+ EK+L+SD+ YG++A G + ++ GIIDP KV R L++A+S+A L ++ +VVE E + P+ Sbjct: 344 IAQIKAQIEETTSEYEKETLQERMAKLAGGVAVIKVGAATETELKEKKHRIEDALSATRAAVEEGIVPGGGVTLLRSRKAVEKLLEELDGD-EKIGAQIVYKALSAPIRQIAENAGYDGAVIIEKILASDDPAYGFDALRGEFGNMFEKGIIDPAKVTRSALQNAASIAGMLLTTEVLVVEKPEEKKETPS 533
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH60_RALEJ (60 kDa chaperonin OS=Ralstonia eutropha (strain JMP134) GN=groL PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.438e-43 Identity = 99/194 (51.03%), Postives = 125/194 (64.43%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI--KEPEPAMPAG 578 V QIR IE A DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA LLR + + A+ T +N ++ G IV RA+ PL+ I NAG SVV KV+ + YGYNAA+G Y DL+ G++DPTKV R L++A+SVA L +DC V E +E PAMP G Sbjct: 346 VKQIRAQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALLRARAAISAL--TGENPDQNAGIKIVLRAMEEPLRQIVLNAGEEASVVVAKVIEGKGN-YGYNAASGEYGDLVEMGVLDPTKVTRTALQNAASVASLMLTTDCAVAETPKEESAPAMPGG 536
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH60_GLUOX (60 kDa chaperonin OS=Gluconobacter oxydans GN=groL PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.438e-43 Identity = 94/192 (48.96%), Postives = 130/192 (67.71%), Query Frame = 3 Query: 9 QIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNP 584 QIR IE DY+REKL ER+AKL+GGVAVI+VG TE E+KE+K RV+DAL+AT+AA L R SS + + T DND+++VG +IV++AL PL+ IA NAG +G+V++ KVL ++ + +G++A G Y+DL+AAGIIDPTKVVR L+ A+SV + ++ +V E PE PA P Sbjct: 348 QIRAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKERKDRVDDALHATRAAVEEGIVPGGGTALARASSALKGL--TFDNDDQRVGGEIVRKALQAPLRQIAFNAGEDGAVIAGKVLENEGYVFGFDAQKGEYKDLVAAGIIDPTKVVRTALQDAASVGGLLITTEAMVAE--RPEKKAPAAAP 535
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH602_SPHAL (60 kDa chaperonin 2 OS=Sphingopyxis alaskensis GN=groL2 PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.438e-43 Identity = 92/190 (48.42%), Postives = 128/190 (67.37%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMP 572 +AQIR I+ DY+REKL ER+AKL+GGVAVI+VG TE E+KE+K RV+DAL+AT+AA LLR +D +K ND+++ G DIV+RAL P + IA NAG +G+ + K+L S ++ +G+NAATG YEDL+ AG+IDP KVVR L+ A+SVA + ++ +V E+ + E A P Sbjct: 346 IAQIRQQIDTTTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDALHATRAAVEEGILPGGGIALLRALKALDGLKAA--NDDQQSGIDIVRRALRAPARQIADNAGEDGAWIVGKLLESSDYNWGFNAATGEYEDLVKAGVIDPAKVVRTALQDAASVAALLITTEALVAELPKEEKAAP 533
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH602_AZOC5 (60 kDa chaperonin 2 OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=groL2 PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.438e-43 Identity = 93/195 (47.69%), Postives = 131/195 (67.18%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKE---PEPAMPAG 578 VAQI+ IE DY+REKL ER+AKL+GGVAVI+VG TE E+KEKK RV+DAL+AT+AA LLR ++ +K ++N ++K G DIV+RA+ P + I NAG +GSVV K+L ++ + +GYNA TG Y D++A+GIIDP KVVR L+ A+S++ + ++ +VVE+ + PAMP G Sbjct: 346 VAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVDDALHATRAAVEEGIVPGGGVALLRAIKVLEGLK--VENTDQKTGIDIVRRAIQAPARQIVANAGDDGSVVVGKILENETYTFGYNAQTGEYVDMVASGIIDPAKVVRTALQDAASISALIITTEALVVELPKKAAAAPAMPGG 538
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH60_SYNR3 (60 kDa chaperonin OS=Synechococcus sp. (strain RCC307) GN=groL PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.102e-42 Identity = 97/196 (49.49%), Postives = 131/196 (66.84%), Query Frame = 3 Query: 9 QIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHK---YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPM 587 QIR ++ E Y++EKL ER+AKL+GGVAV++VGA TETE+K+KKLR+EDA+NATKAA TL L+ + + EE +GA+IV +AL PLK IA+NAG NGSVV+E V HK G+NAA+ Y D++AAGIIDP KV R L++A+S+A L ++C+VV++ E + A PAG M Sbjct: 346 QIRKQMDETESTYDKEKLQERLAKLAGGVAVVKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPALTEWANQNLSGEELIGANIVAQALDAPLKRIAENAGANGSVVAENV----RHKPFSEGFNAASNEYVDMLAAGIIDPAKVTRSGLQNAASIAGMVLTTECIVVDLPEKKEAAPAGGGM 537
BLAST of FC923635 vs. ExPASy Swiss-Prot
Match: CH60_LEGPL (60 kDa chaperonin OS=Legionella pneumophila (strain Lens) GN=groL PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.102e-42 Identity = 92/201 (45.77%), Postives = 130/201 (64.68%), Query Frame = 3 Query: 3 VAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 605 + QIR +E DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R +D++K DND++ +G +I++RA+ P++ I NAG SVV KV + YG+NAATG Y D++ GI+DPTKV R L++A+SVA L ++C+V ++ + E + AG+ G G Sbjct: 345 ITQIRAQMEETTSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALIRAQKALDSLKG--DNDDQNMGINILRRAIESPMRQIVTNAGYEASVVVNKV-AEHKDNYGFNAATGEYGDMVEMGILDPTKVTRMALQNAASVASLMLTTECMVADLPKKEEGVGAGDMGGMGGMG 542 The following BLAST results are available for this feature:
BLAST of FC923635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923635 ID=FC923635; Name=FC923635; organism=Citrus clementina; type=EST; length=706bpback to top |