FC923638

Overview
NameFC923638
Unique NameFC923638
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14513 contig Ccv1_Contig14513:1..709. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923638 vs. ExPASy Swiss-Prot
Match: YAJO_ECOLI (Uncharacterized oxidoreductase yajO OS=Escherichia coli (strain K12) GN=yajO PE=3 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.195e-20
Identity = 68/200 (34.00%), Postives = 105/200 (52.50%), Query Frame = 3
Query:  129 LGTQGLEVSKLGLGCMNLSS----GYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEILLGKAFK-MLPREKVQIATK-FGVVGLRDNGVIVKGTPDYVRLCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE------ASPDTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLC 692
            LG   L VS+L LGCM         ++  + EE    +IK A   GI FFDTA+ Y   ++E ++G+A +    RE V +ATK F  VG    G+    +   +    + SL+RL +DY+D+   HR D + PIEET+  +  +V+ GK +YIG S       A    +++ H      ++Q  ++L  R+ E E++PLC
Sbjct:    6 LGKTDLRVSRLCLGCMTFGEPDRGNHAWTLPEESSRPIIKRALEGGINFFDTANSYSDGSSEEIVGRALRDFARREDVVVATKVFHRVGDLPEGL----SRAQILRSIDDSLRRLGMDYVDILQIHRWDYNTPIEETLEALNDVVKAGKARYIGASSMHASQFAQALELQKQHGWAQFVSMQDHYNLIYREEEREMLPLC 201          
BLAST of FC923638 vs. ExPASy Swiss-Prot
Match: PLR2_SCHPO (Probable pyridoxal reductase 2 OS=Schizosaccharomyces pombe GN=SPCC1281.04 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.119e-18
Identity = 68/197 (34.52%), Postives = 109/197 (55.33%), Query Frame = 3
Query:  141 GLEVSKLGLGCMNLS-SGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQN---ANEILLGKAFKMLPR--EKVQIATKFGVVGLRDNGVIVKGTPDYVRLCCEASLKRL-DVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQMEWSLWTRDIEEE-IIPLCRETRI 707
            G +V  +GLG M L+     +P+ +     ++ +A S+G  +++  + YG N   AN  LL   F+  P+  +KV ++ K G        +   G P+ V    + +L RL     +DL+   RVD  VPIE T+  +K  V+ G+I  +GLSEAS ++I+RA A+ PI AV+ E+SL++RDIE+  I+  C +  I
Sbjct:    6 GFKVGPIGLGLMGLTWRPKQTPIKQ--AFELMNYALSQGSNYWNAGEFYGINPPTANLDLLADYFEKYPKNADKVFLSVKGGT---DFKTLAPHGDPESVTKSVKNALTRLRGKKKLDLFQCARVDHKVPIETTMKALKAFVDSGEISCVGLSEASAESIKRALAIVPIAAVETEYSLFSRDIEKNGILDTCTQLSI 197          
BLAST of FC923638 vs. ExPASy Swiss-Prot
Match: KCAB_ORYSJ (Probable voltage-gated potassium channel subunit beta OS=Oryza sativa subsp. japonica GN=KOB1 PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 9.472e-18
Identity = 66/199 (33.17%), Postives = 103/199 (51.76%), Query Frame = 3
Query:  129 LGTQGLEVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEILLGKAFKMLP--REKVQIATK--FGVVGLRDNGVIVKGTPDYVRLCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTI-------RRAHAVHPITAVQMEWSLWTR-DIEEEIIPL 689
            LG  GL VS+L  G       + + +  ++  ++++     G+ FFD A+VY     E ++G+A + L   R  V ++TK  +G  G  D G+  K   + +R     SLKRLD+DY+D+ Y HR D + P+EET+  M  +++ G   Y G SE S   I        R   V PI   Q E++L++R  +E E +PL
Sbjct:    6 LGRSGLRVSQLSYGAWVT---FGNQLDVKEAKALLQACRDAGVNFFDNAEVYANGRAEEIMGQAMRDLGWRRSDVVVSTKLFWGGQGPNDKGLSRKHIVEGLR----GSLKRLDMDYVDVVYCHRPDATTPVEETVRAMNWVIDHGMAFYWGTSEWSAQQITEAWSVANRLDLVGPIVE-QPEYNLFSRHKVESEFLPL 196          
BLAST of FC923638 vs. ExPASy Swiss-Prot
Match: YRPG_BACSU (Uncharacterized oxidoreductase yrpG OS=Bacillus subtilis GN=yrpG PE=3 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.616e-17
Identity = 69/205 (33.66%), Postives = 98/205 (47.80%), Query Frame = 3
Query:  129 LGTQGLEVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNAN----EILLGKAFKM--LPREKVQIATKF--GVVGLRDNGVIVKGTPDY-VRLCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHA------VHPITAVQMEWSLWTRDIEEEIIPLCRE 698
            LG  GL VS+L LG MN    +     E+    ++  A   GI FFDTA++YG   N    E ++GK F      REKV +ATK    +    D    ++G   Y +R   E SLKRL  D+I+LY  H +D   P +E     +  V  GK+ YIG S  +   + +A A         +   Q ++SL  R  E E++P  R+
Sbjct:    6 LGRTGLRVSRLCLGTMN----FGVDTDEKTAFRIMDEALDNGIQFFDTANIYGWGKNAGLTESIIGKWFAQGGQRREKVVLATKVYEPISDPNDGPNDMRGLSLYKIRRHLEGSLKRLQTDHIELYQMHHIDRRTPWDEIWEAFETQVRSGKVDYIGSSNFAGWHLVKAQAEAEKRRFMGLVTEQHKYSLLERTAEMEVLPAARD 206          
BLAST of FC923638 vs. ExPASy Swiss-Prot
Match: NORA_ASPFL (Norsolorinic acid reductase OS=Aspergillus flavus GN=norA PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.701e-17
Identity = 62/210 (29.52%), Postives = 101/210 (48.10%), Query Frame = 3
Query:  120 RVKLGTQGLEVSKLGLGCMNLSSGYSSPVSEED---GISMIKHAFSKGITFFDTADVYGQNANEILLGKAFKMLP-REKVQIATK-------FGVVGLRDN--GVIVKGTPDYVRLCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASP------DTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLC 692
            R+   + G+ VS L LG M+  +G+   + E D     +M+   +  G  F D A+ Y     E  +G+       R+++ ++TK       FG   ++ N  G   K     +RL  +ASL++L  DYIDL Y H  D +  +EE +  +  LV  GK+ Y+G+S+         +   RA+ + P +  Q  WS   RD E +I+P+C
Sbjct:   17 RILSSSAGVRVSPLCLGTMSFGNGWKGVMGECDQATSFNMLDTFYESGGNFIDVANFYQGGDTERWVGEWMAQRQNRDEIVLSTKYTMGYTMFGPQKIKSNYQGNHAKS----LRLSVKASLQKLQTDYIDLLYVHMWDFTTSVEEVMRSLNHLVANGKVLYLGVSDTPAWLVVKCNAFARANGLTPFSVYQGHWSCAFRDFERDILPMC 222          
BLAST of FC923638 vs. ExPASy Swiss-Prot
Match: YI7E_SCHPO (Putative aryl-alcohol dehydrogenase C977.14c OS=Schizosaccharomyces pombe GN=SPAC977.14c PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.019e-17
Identity = 72/227 (31.72%), Postives = 103/227 (45.37%), Query Frame = 3
Query:  129 LGTQGLEVSKLGLGCMNLSSG--YSSPV--SEEDGISMIKHAFSKGITFFDTADVYGQNANEILLGKAFKM--LPREKVQIATK------------FGVVGLRDNGVIVKGTPDYVRLC----------CEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE------ASPDTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRETRI 707
            LG  GL+VSKL LGCM+      +   V   EE+   ++K A+  GI  FDTA+ Y    +E L+GK  +   +PR  + I +K            FG   L   GV    +P+    C           E S+KRL   YID+   HR D  V  EE +  +  +VE GK++YIG S                H  H   ++Q   +L  R+ E E+IP C++T +
Sbjct:   12 LGNSGLKVSKLILGCMSYGKKEYWEDWVLEDEEEVFKIMKAAYDAGIRTFDTANCYSAGVSEELVGKFIRKYEIPRSSIVILSKCFFPVRKDLIKIFG--DLSSRGVHFLDSPELANQCGLSRKHIFDAVEDSVKRLGT-YIDVLQIHRYDPHVSAEEVMRALNDVVESGKVRYIGASTMRCYQFIELQNTAEKHGWHKFISMQNYHNLLYREEEREMIPYCQKTGV 235          
BLAST of FC923638 vs. ExPASy Swiss-Prot
Match: NORA_ASPPA (Norsolorinic acid reductase OS=Aspergillus parasiticus GN=norA PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.047e-16
Identity = 60/208 (28.85%), Postives = 99/208 (47.60%), Query Frame = 3
Query:  120 RVKLGTQGLEVSKLGLGCMNLSSGYSSPVSEED---GISMIKHAFSKGITFFDTADVYGQNANEILLGKAFKMLP-REKVQIATK-------FGVVGLRDNGVIVKGTPDYVRLCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASP------DTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLC 692
            R+   + G+ VS L LG M+  +G+   + E D     +M+   +  G  F D A+ Y     E  +G+       R+++ ++TK       FG   ++ N          +RL  +ASL++L  DYIDL Y H  D +  +EE +  +  LV  GK+ Y+G+S+         +   RA+ + P +  Q  WS   RD E +I+P+C
Sbjct:   17 RILSPSAGVRVSPLCLGTMSFGNGWKGVMGECDQATSFNMLDTFYESGGNFIDVANFYQGGDTERWVGEWMAQRQNRDEIVLSTKYTMGYTMFGPQKIKSN--FQGNHAKSLRLSVKASLQKLQTDYIDLLYVHMWDFTTSVEEVMRSLNHLVANGKVLYLGVSDTPAWLVVKCNAFARANGLTPFSVYQGHWSSAFRDFERDILPMC 222          
BLAST of FC923638 vs. ExPASy Swiss-Prot
Match: KCAB_SCHPO (Putative voltage-gated potassium channel subunit beta OS=Schizosaccharomyces pombe GN=SPCC965.06 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.980e-16
Identity = 71/204 (34.80%), Postives = 105/204 (51.47%), Query Frame = 3
Query:  114 VPRVKLGTQGLEVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEILLGKAFKML--PREKVQIATK--FGVVGLRDNGVIVKGTPDYVRLCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAH-------AVHPITAVQMEWSLWTRD-IEEEIIPL 689
            VP   LG  GL+VS   LG   L+ G +     E   + +K A+  GI  FDTA++Y    +E ++GKA K L   R +  I TK  FG      N   +  +  ++     ASLKRL + Y+D+   HR D SVP+EE +    +L+++GK  Y G SE S   I  AH        + P+ A Q +++  TRD  E++++PL
Sbjct:   13 VPFRFLGRSGLKVSAFSLGGW-LTYG-NEGYDVEHTKNCLKQAWDLGINTFDTAEIYSNGNSETVMGKAIKELGWDRSEYVITTKVFFGAGTKLPNTTGL--SRKHIIEGLNASLKRLGLPYVDVIMAHRPDPSVPMEEVVRAFTQLIQDGKAFYWGTSEWSAFEIEHAHHIATKYNLIAPV-ADQPQYNYLTRDHFEKDLLPL 211          
BLAST of FC923638 vs. ExPASy Swiss-Prot
Match: YEZB_SCHPO (Uncharacterized oxidoreductase C3A11.11c OS=Schizosaccharomyces pombe GN=SPAC3A11.11c PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.866e-16
Identity = 67/198 (33.84%), Postives = 104/198 (52.53%), Query Frame = 3
Query:  150 VSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQN---ANEILLGKAFKMLPR--EKVQIATKFGVVGLRDNGVI-VKGTPDYVRLCCEASLKRL-----DVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQMEWSLWTRDIE-EEIIPLCRETRI 707
            V  +GLG  +L+    +PV +E+   ++ +A S G +F+D  + YG +   AN  LL + F+  P   +KV ++ K    G  D     V GT    R C   S+K +      V  IDLY    +D   PIEET+  +K+ V+ G I+ IGL E S + I+RAH+V  I A+++ +S+  R+IE   +  LC +  I
Sbjct:    9 VGPIGLGLKSLT-WTENPVPDEEAFRIMNYALSHGCSFWDAGEFYGLSEPLANLQLLSRYFQKFPDSIDKVFLSVK----GAFDPETHRVHGT----RECITKSIKTVRETLKKVKTIDLYQCAAIDPDTPIEETMACLKEFVDSGDIRCIGLCEPSVEEIKRAHSVVRIAAIEVHYSMLFREIEYNGVKKLCHDLSI 197          
BLAST of FC923638 vs. ExPASy Swiss-Prot
Match: AAD_PHACH (Aryl-alcohol dehydrogenase [NADP+] OS=Phanerochaete chrysosporium PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.866e-16
Identity = 58/218 (26.61%), Postives = 103/218 (47.25%), Query Frame = 3
Query:  117 PRVKLGTQ-------GLEVSKLGLGCMNLSSGYS----SPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEILLGKAFKMLP-REKVQIATKFGVVGLRDNGV--------IVKGTPDYVRLCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAH------AVHPITAVQMEWSLWTRDIEEEIIPLC 692
            P  KLG         GL VS + LG M++   +       + +E    ++   ++ G  F DTA+VY    +E  +G+  +    R+++ +ATK+ +V  R             V  +   + +    SL++L   YID++Y H  D +  IEE +  +  LV +GK+ Y+G+S+     + +A+         P    + EW++  RD+E +IIP+C
Sbjct:   10 PPTKLGRHRQLAPGCGLHVSPIQLGAMSIGDKWHPYGMGTMDKEASFKLLDAFYNAGGNFIDTANVYQDETSEEFIGEWMEARGNRDQMVVATKYSLVYKRGASFEEIPQKTQYVGNSLKSMHISVHDSLRKLRTSYIDIFYVHFWDYTCTIEEVMNGLHNLVAQGKVLYLGVSDTPAWVVSKANNYARMAGKTPFVIYEGEWNITMRDMERDIIPMC 227          
The following BLAST results are available for this feature:
BLAST of FC923638 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
YAJO_ECOLI1.195e-2034.00Uncharacterized oxidoreductase yajO OS=Escherichia... [more]
PLR2_SCHPO1.119e-1834.52Probable pyridoxal reductase 2 OS=Schizosaccharomy... [more]
KCAB_ORYSJ9.472e-1833.17Probable voltage-gated potassium channel subunit b... [more]
YRPG_BACSU1.616e-1733.66Uncharacterized oxidoreductase yrpG OS=Bacillus su... [more]
NORA_ASPFL4.701e-1729.52Norsolorinic acid reductase OS=Aspergillus flavus ... [more]
YI7E_SCHPO8.019e-1731.72Putative aryl-alcohol dehydrogenase C977.14c OS=Sc... [more]
NORA_ASPPA1.047e-1628.85Norsolorinic acid reductase OS=Aspergillus parasit... [more]
KCAB_SCHPO3.980e-1634.80Putative voltage-gated potassium channel subunit b... [more]
YEZB_SCHPO8.866e-1633.84Uncharacterized oxidoreductase C3A11.11c OS=Schizo... [more]
AAD_PHACH8.866e-1626.61Aryl-alcohol dehydrogenase [NADP+] OS=Phanerochaet... [more]

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Properties
Property NameValue
Genbank descriptionC31707D02EF StrClemenN Citrus clementina cDNA clone C31707D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923638 ID=FC923638; Name=FC923638; organism=Citrus clementina; type=EST; length=709bp
GGCTCATTGTTGACGTTAGAGTCAACTGTCTCTCTACTTATTGAAACTTG
AAAGACACCCAAAACAAAGAAACCAAAACTACAGCTTCAAAAATGGCAGA
AGAGAAACTCCAAGTTCCAAGAGTGAAACTTGGTACCCAAGGCCTCGAGG
TTTCAAAGTTGGGGCTTGGATGCATGAACCTGAGTTCTGGTTATAGCTCT
CCAGTCTCAGAAGAGGATGGCATCTCAATGATAAAACATGCTTTCAGTAA
AGGAATCACTTTCTTTGATACTGCTGATGTGTACGGACAAAATGCTAATG
AAATTCTTCTGGGAAAGGCCTTCAAGATGTTGCCCAGAGAAAAGGTACAA
ATAGCCACAAAGTTTGGGGTTGTAGGACTAAGAGATAATGGCGTGATCGT
GAAGGGCACCCCTGATTACGTGCGCTTGTGTTGTGAAGCTAGCCTGAAGC
GACTTGATGTGGATTACATTGATCTATATTATCAACATAGAGTGGACACA
TCAGTCCCCATAGAGGAAACCATTGGTGAAATGAAGAAGCTGGTGGAAGA
GGGTAAAATCAAGTACATTGGATTATCTGAGGCCAGCCCAGACACAATTA
GGAGAGCACATGCTGTTCATCCCATCACAGCTGTACAAATGGAATGGTCC
CTCTGGACTCGTGATATTGAGGAAGAGATAATACCCCTCTGCAGGGAAAC
TCGCATTGG
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