FC923638
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923638 vs. ExPASy Swiss-Prot
Match: KCAB2_MOUSE (Voltage-gated potassium channel subunit beta-2 OS=Mus musculus GN=Kcnab2 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.865e-14 Identity = 60/196 (30.61%), Postives = 96/196 (48.98%), Query Frame = 3 Query: 129 LGTQGLEVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEILLGKAFKMLP--REKVQIATK--FGVVGLRDNGVIVKGTPDYVRLCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PITAVQMEWSLWTRDIEEEIIP 686 LG GL VS LGLG G +++E ++ A+ GI FDTA+VY E++LG K R + I TK +G + G+ K + ++ ASL+RL ++Y+D+ + +R D + P+EET+ M ++ +G Y G S S I A++V P Q E+ ++ R+ E +P Sbjct: 42 LGKSGLRVSCLGLGTWVTFGGQ---ITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLK----ASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLP 230
BLAST of FC923638 vs. ExPASy Swiss-Prot
Match: KCAB1_RAT (Voltage-gated potassium channel subunit beta-1 OS=Rattus norvegicus GN=Kcnab1 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.298e-14 Identity = 59/196 (30.10%), Postives = 95/196 (48.47%), Query Frame = 3 Query: 129 LGTQGLEVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEILLGKAFKMLP--REKVQIATK--FGVVGLRDNGVIVKGTPDYVRLCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PITAVQMEWSLWTRDIEEEIIP 686 LG GL VS LGLG G +S+E ++ A+ G+ FDTA+VY E++LG K R + I TK +G + G+ K + ++ SL+RL ++Y+D+ + +R D++ P+EE + M ++ +G Y G S S I A++V P Q E+ L+ R+ E +P Sbjct: 76 LGKSGLRVSCLGLGTWVTFGGQ---ISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLK----GSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLP 264
BLAST of FC923638 vs. ExPASy Swiss-Prot
Match: KCAB1_MUSPU (Voltage-gated potassium channel subunit beta-1 OS=Mustela putorius GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.298e-14 Identity = 59/196 (30.10%), Postives = 95/196 (48.47%), Query Frame = 3 Query: 129 LGTQGLEVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEILLGKAFKMLP--REKVQIATK--FGVVGLRDNGVIVKGTPDYVRLCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PITAVQMEWSLWTRDIEEEIIP 686 LG GL VS LGLG G +S+E ++ A+ G+ FDTA+VY E++LG K R + I TK +G + G+ K + ++ SL+RL ++Y+D+ + +R D++ P+EE + M ++ +G Y G S S I A++V P Q E+ L+ R+ E +P Sbjct: 83 LGKSGLRVSCLGLGTWVTFGGQ---ISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLK----GSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLP 271
BLAST of FC923638 vs. ExPASy Swiss-Prot
Match: KCAB1_MOUSE (Voltage-gated potassium channel subunit beta-1 OS=Mus musculus GN=Kcnab1 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.298e-14 Identity = 59/196 (30.10%), Postives = 95/196 (48.47%), Query Frame = 3 Query: 129 LGTQGLEVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEILLGKAFKMLP--REKVQIATK--FGVVGLRDNGVIVKGTPDYVRLCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PITAVQMEWSLWTRDIEEEIIP 686 LG GL VS LGLG G +S+E ++ A+ G+ FDTA+VY E++LG K R + I TK +G + G+ K + ++ SL+RL ++Y+D+ + +R D++ P+EE + M ++ +G Y G S S I A++V P Q E+ L+ R+ E +P Sbjct: 76 LGKSGLRVSCLGLGTWVTFGGQ---ISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLK----GSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLP 264
BLAST of FC923638 vs. ExPASy Swiss-Prot
Match: KCAB1_BOVIN (Voltage-gated potassium channel subunit beta-1 OS=Bos taurus GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.298e-14 Identity = 59/196 (30.10%), Postives = 95/196 (48.47%), Query Frame = 3 Query: 129 LGTQGLEVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEILLGKAFKMLP--REKVQIATK--FGVVGLRDNGVIVKGTPDYVRLCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PITAVQMEWSLWTRDIEEEIIP 686 LG GL VS LGLG G +S+E ++ A+ G+ FDTA+VY E++LG K R + I TK +G + G+ K + ++ SL+RL ++Y+D+ + +R D++ P+EE + M ++ +G Y G S S I A++V P Q E+ L+ R+ E +P Sbjct: 76 LGKSGLRVSCLGLGTWVTFGGQ---ISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLK----GSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLP 264
BLAST of FC923638 vs. ExPASy Swiss-Prot
Match: YGHZ_ECO57 (Uncharacterized protein yghZ OS=Escherichia coli O157:H7 GN=yghZ PE=4 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.084e-13 Identity = 59/195 (30.26%), Postives = 99/195 (50.77%), Query Frame = 3 Query: 132 GTQGLEVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEI------LLGKAFKMLPREKVQIATKFGV---VGLRDNGVIVKGTPDYVRLCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPD-TIRRAHAVH----PITAVQMEWSLWTRDIEE 674 G GL + L LG + + G+ + + + I ++ AF GIT FD A+ YG LL + F R+++ I+TK G G +G G+ Y+ + SLKR+ ++Y+D++Y HRVD + P+EET + V+ GK Y+G+S SP+ T + +H P+ Q ++L R +++ Sbjct: 19 GKSGLRLPALSLGLWH-NFGHVNALESQRAI--LRKAFDLGITHFDLANNYGPPPGSAEENFGRLLREDFAAY-RDELIISTKAGYDMWPGPYGSG----GSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSGKALYVGISSYSPERTQKMVELLHEWKIPLLIHQPSYNLLNRWVDK 205
BLAST of FC923638 vs. ExPASy Swiss-Prot
Match: YGHZ_ECOLI (Uncharacterized protein yghZ OS=Escherichia coli (strain K12) GN=yghZ PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.849e-13 Identity = 53/167 (31.74%), Postives = 87/167 (52.10%), Query Frame = 3 Query: 132 GTQGLEVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEI------LLGKAFKMLPREKVQIATKFGV---VGLRDNGVIVKGTPDYVRLCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRR 605 G GL + L LG + + G+ + + + I ++ AF GIT FD A+ YG LL + F R+++ I+TK G G +G G+ Y+ + SLKR+ ++Y+D++Y HRVD + P+EET + V+ GK Y+G+S SP+ ++ Sbjct: 19 GKSGLRLPALSLGLWH-NFGHVNALESQRAI--LRKAFDLGITHFDLANNYGPPPGSAEENFGRLLREDFAAY-RDELIISTKAGYDMWPGPYGSG----GSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSGKALYVGISSYSPERTQK 177
BLAST of FC923638 vs. ExPASy Swiss-Prot
Match: YP088_YEAST (Putative aryl-alcohol dehydrogenase YPL088W OS=Saccharomyces cerevisiae GN=YPL088W PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 62/225 (27.56%), Postives = 102/225 (45.33%), Query Frame = 3 Query: 114 VPRVKLGTQGLEVSKLGLGCMNLSSGYSSPVSEEDG---ISMIKHAFSKGITFFDTADVYGQNANEILLGK--AFKMLPREKVQIATKF-----GVVGLRDNGVIVKG-----------TPDYVRLCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE------ASPDTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRETRI 707 V +V+LG GL++S + +GCM+ S + ED ++KH + KG+ FDTAD Y +E ++ + + + RE V I TK + L N + + + ++ E S+KRL YIDL HR+D P++E + + +VE G ++YIG S A + + Q ++L R+ E E+IP + I Sbjct: 4 VKQVRLGNSGLKISPIVIGCMSYGSKKWADWVIEDKTQIFKIMKHCYDKGLRTFDTADFYSNGLSERIIKEFLEYYSIKRETVVIMTKIYFPVDETLDLHHNFTLNEFEELDLSNQRGLSRKHIIAGVENSVKRLGT-YIDLLQIHRLDHETPMKEIMKALNDVVEAGHVRYIGASSMLATEFAELQFTADKYGWFQFISSQSYYNLLYREDERELIPFAKRHNI 227
BLAST of FC923638 vs. ExPASy Swiss-Prot
Match: AAD4_YEAST (Probable aryl-alcohol dehydrogenase AAD4 OS=Saccharomyces cerevisiae GN=AAD4 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.044e-12 Identity = 49/177 (27.68%), Postives = 84/177 (47.46%), Query Frame = 3 Query: 204 VSEEDGISMIKHAFSKGITFFDTADVYGQNANEILLGKAFKMLP-REKVQIATKFG------VVGLRDNGVIVKGTPDYVRLCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRA------HAVHPITAVQMEWSLWTRDIEEEIIPLCR 695 +++E ++ + G DTA+ Y +EI +G+ K R+++ IATKF VG + + + SL++L D+ID+ Y H D IEE + + LV++GK+ Y+G+S+ + A H P + Q +W++ RD E +IIP+ R Sbjct: 4 MNKEQAFELLDAFYEAGGNCIDTANSYQNEESEIWIGEWMKSRKLRDQIVIATKFTGDYKKYEVGGGKSANYCGNHKHSLHVSVRDSLRKLQTDWIDILYVHWWDYMSSIEEVMDSLHILVQQGKVLYLGVSDTPAWVVSAANYYATSHGKTPFSIYQGKWNVLNRDFERDIIPMAR 180
BLAST of FC923638 vs. ExPASy Swiss-Prot
Match: ARK73_HUMAN (Aflatoxin B1 aldehyde reductase member 3 OS=Homo sapiens GN=AKR7A3 PE=1 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 5.947e-12 Identity = 56/184 (30.43%), Postives = 84/184 (45.65%), Query Frame = 3 Query: 165 LGCMNLSSGYSSPVSEEDGISMIKHAF-SKGITFFDTADVYGQNANEILLGKAFKMLPREKVQIATKFGVVGLRDNGVIVKGTPDYVRLCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE------ASPDTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCR 695 LG M + +P S + + AF +G T DTA VY + +E +LG L ++ + L N + PD +R E SLKRL +DL+Y H D S P+EET+ +L +EGK +GLS A T+ +++ T Q ++ TR +E E+ P R Sbjct: 14 LGAMEMGRRMDAPTS-----AAVTRAFLERGHTEIDTAFVYSEGQSETILGGLGLRLGGSDCRVKIDTKAIPLFGNSL----KPDSLRFQLETSLKRLQCPRVDLFYLHMPDHSTPVEETLRACHQLHQEGKFVELGLSNYAAWEVAEICTLCKSNGWILPTVYQGMYNAITRQVETELFPCLR 188 The following BLAST results are available for this feature:
BLAST of FC923638 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923638 ID=FC923638; Name=FC923638; organism=Citrus clementina; type=EST; length=709bpback to top |