FC923642

Overview
NameFC923642
Unique NameFC923642
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923642 vs. ExPASy Swiss-Prot
Match: DYR1B_HUMAN (Dual specificity tyrosine-phosphorylation-regulated kinase 1B OS=Homo sapiens GN=DYRK1B PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.983e-13
Identity = 36/97 (37.11%), Postives = 62/97 (63.92%), Query Frame = 3
Query:  327 DDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHD-KGGNRCVQIRNWFDYRNHICIV 614
            DD +  Y+   GE    RY+I S +G+G+FGQV++ +D + +E+VAIKI++  K +   A IE+ +L+ + +HD +     V ++  F +RNH+C+V
Sbjct:   93 DDDNHDYIVRSGERWLERYEIDSLIGKGSFGQVVKAYDHQTQELVAIKIIKNKKAFLNQAQIELRLLELMNQHDTEMKYYIVHLKRHFMFRNHLCLV 189          
BLAST of FC923642 vs. ExPASy Swiss-Prot
Match: DYRK3_RAT (Dual specificity tyrosine-phosphorylation-regulated kinase 3 OS=Rattus norvegicus GN=Dyrk3 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.794e-13
Identity = 35/96 (36.46%), Postives = 59/96 (61.46%), Query Frame = 3
Query:  327 DDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICI 611
            DD DG Y+    ++L  RY++   +G+G+FGQV   +D + ++ VA+K+VR  K++   A  EI +L+ L K DK G+   + +   F +RNH+C+
Sbjct:  190 DDADGAYIHVPRDHLAYRYEVLKIIGKGSFGQVARVYDHKLRQYVALKMVRNEKRFHRQAAEEIRILEHLKKQDKTGSMNVIHMLESFTFRNHVCM 285          
BLAST of FC923642 vs. ExPASy Swiss-Prot
Match: DYRK3_MOUSE (Dual specificity tyrosine-phosphorylation-regulated kinase 3 OS=Mus musculus GN=Dyrk3 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.794e-13
Identity = 35/96 (36.46%), Postives = 59/96 (61.46%), Query Frame = 3
Query:  327 DDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICI 611
            DD DG Y+    ++L  RY++   +G+G+FGQV   +D + ++ VA+K+VR  K++   A  EI +L+ L K DK G+   + +   F +RNH+C+
Sbjct:  190 DDADGAYIHVPRDHLAYRYEVLKIIGKGSFGQVARVYDHKLRQYVALKMVRNEKRFHRQAAEEIRILEHLKKQDKTGSMNVIHMLESFTFRNHVCM 285          
BLAST of FC923642 vs. ExPASy Swiss-Prot
Match: DYRK3_MACFA (Dual specificity tyrosine-phosphorylation-regulated kinase 3 OS=Macaca fascicularis GN=DYRK3 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.794e-13
Identity = 35/96 (36.46%), Postives = 59/96 (61.46%), Query Frame = 3
Query:  327 DDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICI 611
            DD DG Y+    ++L  RY++   +G+G+FGQV   +D + ++ VA+K+VR  K++   A  EI +L+ L K DK G+   + +   F +RNH+C+
Sbjct:  171 DDADGAYIHVPRDHLAYRYEVLKIIGKGSFGQVARVYDHKLRQYVALKMVRNEKRFHRQAAEEIRILEHLKKQDKTGSMNVIHMLESFTFRNHVCM 266          
BLAST of FC923642 vs. ExPASy Swiss-Prot
Match: DYRK3_HUMAN (Dual specificity tyrosine-phosphorylation-regulated kinase 3 OS=Homo sapiens GN=DYRK3 PE=1 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 6.794e-13
Identity = 35/96 (36.46%), Postives = 59/96 (61.46%), Query Frame = 3
Query:  327 DDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICI 611
            DD DG Y+    ++L  RY++   +G+G+FGQV   +D + ++ VA+K+VR  K++   A  EI +L+ L K DK G+   + +   F +RNH+C+
Sbjct:  191 DDADGAYIHVPRDHLAYRYEVLKIIGKGSFGQVARVYDHKLRQYVALKMVRNEKRFHRQAAEEIRILEHLKKQDKTGSMNVIHMLESFTFRNHVCM 286          
BLAST of FC923642 vs. ExPASy Swiss-Prot
Match: DYRK1_DICDI (Probable serine/threonine-protein kinase dyrk1 OS=Dictyostelium discoideum GN=dyrk1 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.794e-13
Identity = 35/98 (35.71%), Postives = 64/98 (65.31%), Query Frame = 3
Query:  327 DDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHD-KGGNRCVQIRNWFDYRNHICIVS 617
            DD++  Y+  +GE    R++I S +G+G+FGQV++ +D   KE VAIKI++    +   A+IEI +L+ +   D +   + +++++ F +RNH+CIV+
Sbjct:  286 DDENADYIVRIGEVFVDRFEIISSLGKGSFGQVVKAFDSVLKEYVAIKIIKNKVPFYNQALIEIRLLELMNNKDPEDQYKIIKLKHHFKFRNHLCIVT 383          
BLAST of FC923642 vs. ExPASy Swiss-Prot
Match: DYRK3_DROME (Putative dual specificity tyrosine-phosphorylation-regulated kinase 3 homolog OS=Drosophila melanogaster GN=Dyrk3 PE=1 SV=3)

HSP 1 Score: 72.0182 bits (175), Expect = 3.372e-12
Identity = 34/96 (35.42%), Postives = 59/96 (61.46%), Query Frame = 3
Query:  327 DDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICI 611
            D++ G Y+    +++  RY++   +G+G+FGQV++ +D +  E VA+KIVR  K++   A  EI +L  L +HDK      + + ++F +RNH CI
Sbjct:  258 DNEQGAYIHVPHDHVAYRYEMLKIIGKGSFGQVIKAYDHKTHEHVALKIVRNEKRFHRQAQEEIRILHHLRRHDKYNTMNIIHMFDYFTFRNHTCI 353          
BLAST of FC923642 vs. ExPASy Swiss-Prot
Match: MNB_DROME (Serine/threonine-protein kinase minibrain OS=Drosophila melanogaster GN=mnb PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 4.404e-12
Identity = 35/97 (36.08%), Postives = 61/97 (62.89%), Query Frame = 3
Query:  327 DDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHD-KGGNRCVQIRNWFDYRNHICIV 614
            DD +  Y+   GE    RY+I S +G+G+FGQV++ +D E +  VAIKI++  K +   A IE+++L+ + + D +     V+++  F +RNH+C+V
Sbjct:  146 DDDNHDYIIKNGEKFLDRYEIDSLIGKGSFGQVVKAYDHEEQCHVAIKIIKNKKPFLNQAQIEVKLLEMMNRADAENKYYIVKLKRHFMWRNHLCLV 242          
BLAST of FC923642 vs. ExPASy Swiss-Prot
Match: DYRK2_CHICK (Dual specificity tyrosine-phosphorylation-regulated kinase 2 OS=Gallus gallus GN=DYRK2 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.674e-11
Identity = 33/96 (34.38%), Postives = 58/96 (60.42%), Query Frame = 3
Query:  327 DDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICI 611
            DD  G Y+    +++  RY++   +G+G+FGQV++ +D +  + VA+K+VR  K++   A  EI +L+ L K DK  N   + +   F +R+HIC+
Sbjct:  129 DDDQGSYIQVPHDHIAYRYEVLKVIGKGSFGQVVKAYDHKMHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNNMNVIHMLENFTFRSHICM 224          
BLAST of FC923642 vs. ExPASy Swiss-Prot
Match: HIPK1_RAT (Homeodomain-interacting protein kinase 1 OS=Rattus norvegicus GN=Hipk1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.186e-11
Identity = 33/96 (34.38%), Postives = 53/96 (55.21%), Query Frame = 3
Query:  336 DGHYMFALGE---NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV 614
            +G Y     E   ++T+ Y++   +G GTFGQV +CW R  KE+VAIKI++    Y     IE+ +L +L+  +      V+    F ++NH C+V
Sbjct:  172 EGDYQLVQHEILCSMTNSYEVLEFLGRGTFGQVAKCWKRSTKEIVAIKILKNHPSYARQGQIEVSILSRLSSENADEYNFVRSYECFQHKNHTCLV 267          
The following BLAST results are available for this feature:
BLAST of FC923642 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
DYR1B_HUMAN3.983e-1337.11Dual specificity tyrosine-phosphorylation-regulate... [more]
DYRK3_RAT6.794e-1336.46Dual specificity tyrosine-phosphorylation-regulate... [more]
DYRK3_MOUSE6.794e-1336.46Dual specificity tyrosine-phosphorylation-regulate... [more]
DYRK3_MACFA6.794e-1336.46Dual specificity tyrosine-phosphorylation-regulate... [more]
DYRK3_HUMAN6.794e-1336.46Dual specificity tyrosine-phosphorylation-regulate... [more]
DYRK1_DICDI6.794e-1335.71Probable serine/threonine-protein kinase dyrk1 OS=... [more]
DYRK3_DROME3.372e-1235.42Putative dual specificity tyrosine-phosphorylation... [more]
MNB_DROME4.404e-1236.08Serine/threonine-protein kinase minibrain OS=Droso... [more]
DYRK2_CHICK1.674e-1134.38Dual specificity tyrosine-phosphorylation-regulate... [more]
HIPK1_RAT2.186e-1134.38Homeodomain-interacting protein kinase 1 OS=Rattus... [more]

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Properties
Property NameValue
Genbank descriptionC31707D06EF StrClemenN Citrus clementina cDNA clone C31707D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923642 ID=FC923642; Name=FC923642; organism=Citrus clementina; type=EST; length=695bp
ATTCTTATCTTCGTTATTTTATTCGTTCGTTTCAATCGCATCAAGATCTC
GATCTCTCTCTTATTTCCTCGCCGTGAGCTGCGATCATGGAGATGGAGCG
CGTGACGGAGTTTCCTTTTTCGAATCTGGATCGGCGTCCTCGTAAGCGAG
CGCGTTTGGGCTGGGACGTGCCTCAGGTACCGAAGGCTCAGGTAGGATTA
TTTTGTGGACAAGAGGTTGGGAATGTAACAAGCTTTGCACCTCCAAGAGC
TCCCTCAGACCATGTCACTAGTTCTTCTCTATTTGTAAAGGGAGTGGCTC
GAAATGGTTCTCCCCCATGGCGTGAGGATGACAAAGATGGCCATTATATG
TTTGCGCTTGGAGAAAATTTAACTTCTCGCTATAAGATTCACAGCAAAAT
GGGTGAAGGAACCTTCGGTCAGGTTTTGGAATGCTGGGATCGTGAGAGGA
AAGAAATGGTAGCCATTAAAATTGTTCGTGGGATCAAGAAATATCGTGAG
GCTGCTATGATAGAAATTGAAGTACTTCAACAACTTGCAAAACATGATAA
AGGTGGCAACCGTTGTGTGCAAATACGGAACTGGTTTGACTATCGTAACC
ATATCTGTATTGTAAGTATATGATTGTTTTGTGATGAATTAATTTCCCCA
ATTTACACATAATTTGGGGGTTTAGACTTCTGGATGGATTCAATG
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