FC923643

Overview
NameFC923643
Unique NameFC923643
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length697
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923643 vs. ExPASy Swiss-Prot
Match: PPIG_RAT (Peptidyl-prolyl cis-trans isomerase G OS=Rattus norvegicus GN=Ppig PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 9.561e-15
Identity = 49/159 (30.82%), Postives = 84/159 (52.83%), Query Frame = 2
Query:  131 AVLNTSKGYIIVELFKDGSPETVDKFIDLC--QKG---------YFKGMSFHHVIKNYVIQAGH-SKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTV-KSKDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIIN 568
            A+ N   G ++ ELF D  P+T + F  LC  +KG         ++K   FH V+K++++Q G  S+      E    G    +      ++ F++    + KD+ G + +ITT P P L+   +VFG+V+ G++VV+EIE   TD   +P ++V I++
Sbjct:   15 AINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKPFAEVRILS 173          
BLAST of FC923643 vs. ExPASy Swiss-Prot
Match: PPIG_MOUSE (Peptidyl-prolyl cis-trans isomerase G OS=Mus musculus GN=Ppig PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.561e-15
Identity = 49/159 (30.82%), Postives = 84/159 (52.83%), Query Frame = 2
Query:  131 AVLNTSKGYIIVELFKDGSPETVDKFIDLC--QKG---------YFKGMSFHHVIKNYVIQAGH-SKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTV-KSKDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIIN 568
            A+ N   G ++ ELF D  P+T + F  LC  +KG         ++K   FH V+K++++Q G  S+      E    G    +      ++ F++    + KD+ G + +ITT P P L+   +VFG+V+ G++VV+EIE   TD   +P ++V I++
Sbjct:   15 AINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKPFAEVRILS 173          
BLAST of FC923643 vs. ExPASy Swiss-Prot
Match: PPIG_HUMAN (Peptidyl-prolyl cis-trans isomerase G OS=Homo sapiens GN=PPIG PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 9.561e-15
Identity = 49/159 (30.82%), Postives = 84/159 (52.83%), Query Frame = 2
Query:  131 AVLNTSKGYIIVELFKDGSPETVDKFIDLC--QKG---------YFKGMSFHHVIKNYVIQAGH-SKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTV-KSKDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIIN 568
            A+ N   G ++ ELF D  P+T + F  LC  +KG         ++K   FH V+K++++Q G  S+      E    G    +      ++ F++    + KD+ G + +ITT P P L+   +VFG+V+ G++VV+EIE   TD   +P ++V I++
Sbjct:   15 AINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKPFAEVRILS 173          
BLAST of FC923643 vs. ExPASy Swiss-Prot
Match: CYP10_CAEEL (Peptidyl-prolyl cis-trans isomerase 10 OS=Caenorhabditis elegans GN=cyn-10 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 9.561e-15
Identity = 45/149 (30.20%), Postives = 77/149 (51.68%), Query Frame = 2
Query:  137 LNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKSK--DSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIINVTL 577
            L+T+ G I +EL+ D +P+  + F+ LC   Y+ G  FH  IK++++Q G         E    G    +  ++ KH++    ++ +   DS   + +IT A    L+ K  +FG+V+ G D ++EIE +  D  Y+P     I NVT+
Sbjct:    5 LHTTSGDIKIELYVDDAPKACENFLALCASDYYNGCIFHRNIKDFMVQTGDPTHSGKGGESIWGGPFEDEFVSALKHDSRGCVSMANNGPDSNRSQFFITYAKQAHLDMKYTLFGKVIDGFDTLEEIETIKVDNKYRPLVQQKIQNVTI 153          
BLAST of FC923643 vs. ExPASy Swiss-Prot
Match: PPIL1_EMENI (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Emericella nidulans GN=cyp1 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.631e-14
Identity = 44/151 (29.14%), Postives = 75/151 (49.67%), Query Frame = 2
Query:  140 NTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKSK--DSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIINVTLKHA 586
            +TS G   VEL+   +P+T   F  L Q+GY+  + FH +I N+++Q G               K   ++R+  KH    I ++ +   ++ G + +IT AP P L+ K  +FGRV  G  ++Q +  V T+   +P  +V I+   +  A
Sbjct:    8 DTSMGSFTVELYNSHAPKTCKNFATLAQRGYYNNVIFHRIIPNFMVQTGDPTGTGRGGSSIYGEKFEDEIRSDLKHTGAGILSMANSGPNTNGSQFFITLAPTPWLDGKHTIFGRVKSGMRIIQRMGLVKTNNEDRPLDEVKILRAKVVEA 158          
BLAST of FC923643 vs. ExPASy Swiss-Prot
Match: PPIL1_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Homo sapiens GN=PPIL1 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.782e-14
Identity = 45/150 (30.00%), Postives = 75/150 (50.00%), Query Frame = 2
Query:  122 PGHAVLNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKS--KDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGII 565
            P +  L TS G I++EL+   +P+T   F +L ++GY+ G  FH +IK+++IQ G               +   +L    K     I  + +   D+ G + ++T AP   L+ K  +FGRV +G  +V  +  V+T+   +P  DV II
Sbjct:   11 PPNVYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKII 160          
BLAST of FC923643 vs. ExPASy Swiss-Prot
Match: PPIL1_BOVIN (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Bos taurus GN=PPIL1 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.782e-14
Identity = 45/150 (30.00%), Postives = 75/150 (50.00%), Query Frame = 2
Query:  122 PGHAVLNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKS--KDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGII 565
            P +  L TS G I++EL+   +P+T   F +L ++GY+ G  FH +IK+++IQ G               +   +L    K     I  + +   D+ G + ++T AP   L+ K  +FGRV +G  +V  +  V+T+   +P  DV II
Sbjct:   11 PPNVYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKII 160          
BLAST of FC923643 vs. ExPASy Swiss-Prot
Match: PPIL1_ASPFU (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspergillus fumigatus GN=cyp1 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.782e-14
Identity = 44/146 (30.14%), Postives = 73/146 (50.00%), Query Frame = 2
Query:  134 VLNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKSK--DSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGII 565
            V +TS G   VEL+ + +P+T   F  L Q+GY+  + FH +I N+++Q G               K   ++    KH    + ++ +   ++ G + +IT AP P L+ K  +FGRV  G  V+Q +  V T+   +P  +V II
Sbjct:    6 VFDTSMGSFTVELYNEHAPKTCRNFATLAQRGYYNNVIFHRIIPNFMVQTGDPTGTGRGGSSIYGEKFEDEIHPGLKHTGAGVLSMANSGPNTNGSQFFITLAPTPWLDGKHTIFGRVKSGMRVIQRMGLVKTNSEDRPVDEVKII 151          
BLAST of FC923643 vs. ExPASy Swiss-Prot
Match: PPID_YARLI (Peptidyl-prolyl cis-trans isomerase D OS=Yarrowia lipolytica GN=CPR6 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.782e-14
Identity = 48/151 (31.79%), Postives = 80/151 (52.98%), Query Frame = 2
Query:  152 GYIIVELFKDGSPETVDKFIDLC--QKG--------YFKGMSFHHVIKNYVIQAGH-SKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKS-KDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIIN 568
            G I  ELF D  P+T + F  LC  +KG        +FKG SFH VIK++++Q G  +       E     K   +    P  + F++    +  ++ G + +ITT   P L++K +VFG+++ G+ +V++IE  +T E  +PK  V I++
Sbjct:   18 GKIYFELFADKVPKTAENFRALCTGEKGNTQAGIPLHFKGSSFHRVIKDFMVQGGDFTAGNGTGGESIYGEKFPDEAFPYPHDQPFLLSMANAGPNTNGSQFFITTTETPHLDNKHVVFGKLLSGKGIVRQIERTETGEQDRPKQPVTIVD 168          
BLAST of FC923643 vs. ExPASy Swiss-Prot
Match: PPIL1_ASPOR (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspergillus oryzae GN=cyp1 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.633e-14
Identity = 44/144 (30.56%), Postives = 72/144 (50.00%), Query Frame = 2
Query:  140 NTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKSK--DSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGII 565
            +TS G   VEL+   +P+T   F  L Q+GY+  + FH +I N+++Q G               K   ++R   KH    I ++ +   ++ G + ++T AP P L+ K  +FGRV  G  V+Q +  V T+   +P  +V II
Sbjct:    8 DTSMGSFTVELYNSHAPKTCKNFATLAQRGYYNNVIFHRIIPNFMVQTGDPTGTGRGGSSIYGEKFEDEIRADLKHTGAGILSMANSGPNTNGSQFFVTLAPTPWLDGKHTIFGRVKSGMRVIQRMGLVKTNGEDRPVDEVKII 151          
The following BLAST results are available for this feature:
BLAST of FC923643 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
PPIG_RAT9.561e-1530.82Peptidyl-prolyl cis-trans isomerase G OS=Rattus no... [more]
PPIG_MOUSE9.561e-1530.82Peptidyl-prolyl cis-trans isomerase G OS=Mus muscu... [more]
PPIG_HUMAN9.561e-1530.82Peptidyl-prolyl cis-trans isomerase G OS=Homo sapi... [more]
CYP10_CAEEL9.561e-1530.20Peptidyl-prolyl cis-trans isomerase 10 OS=Caenorha... [more]
PPIL1_EMENI1.631e-1429.14Peptidyl-prolyl cis-trans isomerase-like 1 OS=Emer... [more]
PPIL1_HUMAN2.782e-1430.00Peptidyl-prolyl cis-trans isomerase-like 1 OS=Homo... [more]
PPIL1_BOVIN2.782e-1430.00Peptidyl-prolyl cis-trans isomerase-like 1 OS=Bos ... [more]
PPIL1_ASPFU2.782e-1430.14Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspe... [more]
PPID_YARLI2.782e-1431.79Peptidyl-prolyl cis-trans isomerase D OS=Yarrowia ... [more]
PPIL1_ASPOR3.633e-1430.56Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspe... [more]

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Properties
Property NameValue
Genbank descriptionC31707D08EF StrClemenN Citrus clementina cDNA clone C31707D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923643 ID=FC923643; Name=FC923643; organism=Citrus clementina; type=EST; length=697bp
GTTGTGCTTAGTTGTCACATATAGACATTGGTCGCATTCACCAAGGTCAA
ATGAACAAATAGGGAATGAATCGTCAACCGCTGAGGATGATGCCTATGCG
GTTTCAAAGAAGTTTGATCTTCCTGGCCATGCTGTTTTAAATACATCTAA
AGGTTATATAATAGTGGAACTCTTCAAAGATGGTTCACCTGAAACCGTGG
ATAAATTTATTGACTTGTGTCAAAAGGGGTACTTCAAAGGTATGTCTTTC
CATCATGTGATAAAAAACTATGTCATTCAAGCTGGGCATTCCAAGGATCT
TGCAGCTGCTGATGAATGGACATCAAGAGGGAAGATCCGCAGTCAGCTGA
GGACCAGTCCGAAGCATGAGGCGTTTATGATTGGAACTGTAAAATCTAAA
GACAGCAAAGGATTTGAGCTATACATTACAACTGCACCAATACCAGATTT
AAATGATAAGCTTATTGTGTTTGGACGAGTAGTGAAGGGTGAGGATGTGG
TGCAGGAAATTGAAGAGGTGGATACAGATGAGCACTATCAGCCTAAGTCA
GATGTAGGGATCATCAATGTGACACTAAAGCATGCGATATGAGGATGTAT
GCTAAGCTACCGAAAAGATTTTACACCTAGCCAAGTTTCTTGTTGTGCTA
TTGATTTTCGTATTAATCTTGTATTGCTGCTGCTAGAACGCTTGGTT
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