FC923643

Overview
NameFC923643
Unique NameFC923643
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length697
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923643 vs. ExPASy Swiss-Prot
Match: NKTR_MOUSE (NK-tumor recognition protein OS=Mus musculus GN=Nktr PE=1 SV=3)

HSP 1 Score: 78.5666 bits (192), Expect = 3.633e-14
Identity = 49/152 (32.24%), Postives = 80/152 (52.63%), Query Frame = 2
Query:  152 GYIIVELFKDGSPETVDKFIDLC--QKGY---------FKGMSFHHVIKNYVIQAGH-SKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTV-KSKDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIIN 568
            G I+ +LF D  P+T   F+ LC  +KG          +KG +FH V+KN++IQ G  S+      E    G  + +        AF++    + K + G + +ITT P P L+   +VFG V+ G +V+++IE + TD   +P +DV +I+
Sbjct:   21 GRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGNGKGGESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDAASRPYADVRVID 172          
BLAST of FC923643 vs. ExPASy Swiss-Prot
Match: NKTR_HUMAN (NK-tumor recognition protein OS=Homo sapiens GN=NKTR PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 3.633e-14
Identity = 49/152 (32.24%), Postives = 80/152 (52.63%), Query Frame = 2
Query:  152 GYIIVELFKDGSPETVDKFIDLC--QKGY---------FKGMSFHHVIKNYVIQAGH-SKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTV-KSKDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIIN 568
            G I+ +LF D  P+T   F+ LC  +KG          +KG +FH V+KN++IQ G  S+      E    G  + +        AF++    + K + G + +ITT P P L+   +VFG V+ G +V+++IE + TD   +P +DV +I+
Sbjct:   21 GRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGNGKGGESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDAASRPYADVRVID 172          
BLAST of FC923643 vs. ExPASy Swiss-Prot
Match: PPIL1_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Mus musculus GN=Ppil1 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.745e-14
Identity = 44/150 (29.33%), Postives = 75/150 (50.00%), Query Frame = 2
Query:  122 PGHAVLNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKS--KDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGII 565
            P +  L TS G I++EL+   +P+T   F +L ++GY+ G  FH +IK+++IQ G               +   +L    K     I  + +   D+ G + ++T AP   L+ K  +FGRV +G  +V  +  V+T+   +P  DV I+
Sbjct:   11 PPNVYLETSMGVIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKIL 160          
BLAST of FC923643 vs. ExPASy Swiss-Prot
Match: PPIL1_CRYNE (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Cryptococcus neoformans GN=CYP1 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.094e-14
Identity = 45/160 (28.12%), Postives = 76/160 (47.50%), Query Frame = 2
Query:  122 PGHAVLNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKSK--DSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIINVTLKHAI*G 595
            P +   +TS G   VEL+   +P+T + F  L ++GY+ G+ FH +I N++IQ G               +   ++    +     I  + +   ++ G + +IT AP P L+ K  +FGRV  G   +Q +E V TD+  +P  ++ I    L  A  G
Sbjct:    6 PTYVTFDTSVGSFTVELYTAHAPKTCNNFAKLAERGYYNGVIFHRIIPNFMIQGGDPTGTGRGGTSIYGDRFADEIHPELRFVGAGILAMANSGPNTNGSQFFITCAPTPYLDGKHTIFGRVSSGMKTIQRLEAVRTDKDDRPVEEIKIHRARLGDATQG 165          
BLAST of FC923643 vs. ExPASy Swiss-Prot
Match: PPIL2_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Homo sapiens GN=PPIL2 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.803e-13
Identity = 54/176 (30.68%), Postives = 91/176 (51.70%), Query Frame = 2
Query:   65 NESSTAEDDA--YAVSKKFDLPGHAVLNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKSK--DSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTD-EHYQPKSDVGIINVTL 577
            +E++  ++D   Y   KK    G+  L+T+KG + +EL  D +P+T + FI LC+K Y+ G  FH  I+N+VIQ G         E       + + R +  H    I ++ +   +S   + +IT      L+ K  +FGRVV G DV+  +E V++D +  +PK ++ I   T+
Sbjct:  261 HEAAAIDEDVLRYQFVKK---KGYVRLHTNKGDLNLELHCDLTPKTCENFIRLCKKHYYDGTIFHRSIRNFVIQGGDPTGTGTGGESYWGKPFKDEFRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENVESDPKTDRPKEEIRIDATTV 433          
BLAST of FC923643 vs. ExPASy Swiss-Prot
Match: PPIL1_NEUCR (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Neurospora crassa GN=cyp-1 PE=3 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.355e-13
Identity = 41/145 (28.28%), Postives = 74/145 (51.03%), Query Frame = 2
Query:  137 LNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKSK--DSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGII 565
            + T+ G   +EL+ + +P+T   F  L  +GY+    FH +IK+++IQ G               K   ++    KH    + ++ +   ++ G + +IT AP P L+ K  +FGRV KG  V++ +  V TD+  +P ++V I+
Sbjct:    7 VETTMGTFTLELYTNHAPKTCKNFATLADRGYYDSTVFHRIIKDFMIQGGDPTGTGRGGSSIYGEKFEDEIHPGLKHTGAGVLSMANAGPNTNGSQFFITLAPTPWLDGKHTIFGRVKKGMGVIRRMGMVPTDKEDRPATEVKIV 151          
BLAST of FC923643 vs. ExPASy Swiss-Prot
Match: PPIL1_RHIOR (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Rhizopus oryzae GN=cyp3 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.076e-13
Identity = 42/134 (31.34%), Postives = 72/134 (53.73%), Query Frame = 2
Query:  134 VLNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKS--KDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTD 529
            +L+TS G I +EL+ D +P T   F +L ++GY+ G+SFH +I +++IQ G               +   ++    +H    I ++ +   ++ G + +IT AP P L+ K  +FGRV  G +VV+ +  V TD
Sbjct:    8 ILDTSMGSIHIELYWDHAPRTCKNFYELAKRGYYDGVSFHRIIADFMIQGGDPTGTGRGGTSIYGERFADEINPGLQHTGAGILSMANAGPNTNGSQFFITLAPTPWLDGKHTIFGRVSDGMNVVKRMGLVKTD 141          
BLAST of FC923643 vs. ExPASy Swiss-Prot
Match: PPIL3_CHICK (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gallus gallus GN=PPIL3 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.246e-13
Identity = 43/150 (28.67%), Postives = 77/150 (51.33%), Query Frame = 2
Query:  137 LNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKSK--DSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEH-YQPKSDVGIINVTL 577
            L+T  G I +ELF + +P+T + F+ LC   Y+ G  FH  IK +++Q G               K   +     KH    + ++ +   ++ G + +IT    P L+ K  VFG+V+ G + + E+E++  +E  Y+P +DV I ++T+
Sbjct:    5 LHTDVGDIKIELFCERTPKTCENFLALCASNYYNGCVFHRNIKGFMVQTGDPLGTGKGGTSIWGKKFEDEFSEYLKHSVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITI 154          
BLAST of FC923643 vs. ExPASy Swiss-Prot
Match: PPIL2_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Mus musculus GN=Ppil2 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 5.246e-13
Identity = 52/176 (29.55%), Postives = 90/176 (51.14%), Query Frame = 2
Query:   65 NESSTAEDDA--YAVSKKFDLPGHAVLNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKSK--DSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTD-EHYQPKSDVGIINVTL 577
            +E++  ++D   Y   KK    G+  L+T+KG + +EL  D +P+T + FI LC+K Y+ G  FH  I+N+VIQ G         E       + + R +  H    + ++ +   ++   + +IT      L+ K  +FGRVV G D +  +E V++D +  +PK +V I   T+
Sbjct:  261 HEAAVIDEDVLRYQFVKK---KGYVRLHTNKGDLNLELHCDLTPKTCENFIKLCKKQYYDGTIFHRSIRNFVIQGGDPTGTGTGGESFWGKPFKDEFRPNLSHTGRGVLSMANSGPNTNKSQFFITFRSCAYLDKKHTIFGRVVGGFDTLTAMENVESDPKTDRPKEEVLICTTTV 433          
BLAST of FC923643 vs. ExPASy Swiss-Prot
Match: PPIL2_GIBZE (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Gibberella zeae GN=CYP8 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.246e-13
Identity = 48/179 (26.82%), Postives = 86/179 (48.04%), Query Frame = 2
Query:   56 QIGNESSTAEDDAYAVS-KKFDLPGHAVLNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTV----KSKDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIINVTL 577
            +   E +   D+ Y +  K+    G A + T+ G + +EL+ + +P+ V  FI L Q GY+KG++FH  I N++IQ G         +         +      H     GT+    K K++   + +    P P L+ K  VFG+VV+  +V+ ++E V TD   +P + + I ++ +
Sbjct:  299 ETSGERALLSDEEYMLKPKRVKATGFARMETNMGDLTIELYPEFAPKAVWNFIKLSQTGYYKGVAFHRNIPNFMIQGGDPSGSGRGGQSVWGKYFDDEFDGPMTHNG--RGTLSMANKGKNTNSSQFFFAYKPTPHLDRKHTVFGKVVENINVLSKMENVPTDGSNRPLNKILIKDIVI 475          
The following BLAST results are available for this feature:
BLAST of FC923643 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
NKTR_MOUSE3.633e-1432.24NK-tumor recognition protein OS=Mus musculus GN=Nk... [more]
NKTR_HUMAN3.633e-1432.24NK-tumor recognition protein OS=Homo sapiens GN=NK... [more]
PPIL1_MOUSE4.745e-1429.33Peptidyl-prolyl cis-trans isomerase-like 1 OS=Mus ... [more]
PPIL1_CRYNE8.094e-1428.13Peptidyl-prolyl cis-trans isomerase-like 1 OS=Cryp... [more]
PPIL2_HUMAN1.803e-1330.68Peptidyl-prolyl cis-trans isomerase-like 2 OS=Homo... [more]
PPIL1_NEUCR2.355e-1328.28Peptidyl-prolyl cis-trans isomerase-like 1 OS=Neur... [more]
PPIL1_RHIOR3.076e-1331.34Peptidyl-prolyl cis-trans isomerase-like 1 OS=Rhiz... [more]
PPIL3_CHICK5.246e-1328.67Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gall... [more]
PPIL2_MOUSE5.246e-1329.55Peptidyl-prolyl cis-trans isomerase-like 2 OS=Mus ... [more]
PPIL2_GIBZE5.246e-1326.82Peptidyl-prolyl cis-trans isomerase-like 2 OS=Gibb... [more]

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Properties
Property NameValue
Genbank descriptionC31707D08EF StrClemenN Citrus clementina cDNA clone C31707D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923643 ID=FC923643; Name=FC923643; organism=Citrus clementina; type=EST; length=697bp
GTTGTGCTTAGTTGTCACATATAGACATTGGTCGCATTCACCAAGGTCAA
ATGAACAAATAGGGAATGAATCGTCAACCGCTGAGGATGATGCCTATGCG
GTTTCAAAGAAGTTTGATCTTCCTGGCCATGCTGTTTTAAATACATCTAA
AGGTTATATAATAGTGGAACTCTTCAAAGATGGTTCACCTGAAACCGTGG
ATAAATTTATTGACTTGTGTCAAAAGGGGTACTTCAAAGGTATGTCTTTC
CATCATGTGATAAAAAACTATGTCATTCAAGCTGGGCATTCCAAGGATCT
TGCAGCTGCTGATGAATGGACATCAAGAGGGAAGATCCGCAGTCAGCTGA
GGACCAGTCCGAAGCATGAGGCGTTTATGATTGGAACTGTAAAATCTAAA
GACAGCAAAGGATTTGAGCTATACATTACAACTGCACCAATACCAGATTT
AAATGATAAGCTTATTGTGTTTGGACGAGTAGTGAAGGGTGAGGATGTGG
TGCAGGAAATTGAAGAGGTGGATACAGATGAGCACTATCAGCCTAAGTCA
GATGTAGGGATCATCAATGTGACACTAAAGCATGCGATATGAGGATGTAT
GCTAAGCTACCGAAAAGATTTTACACCTAGCCAAGTTTCTTGTTGTGCTA
TTGATTTTCGTATTAATCTTGTATTGCTGCTGCTAGAACGCTTGGTT
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