FC923643

Overview
NameFC923643
Unique NameFC923643
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length697
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923643 vs. ExPASy Swiss-Prot
Match: PPIL1_ASPNG (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspergillus niger GN=cypC PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.246e-13
Identity = 43/148 (29.05%), Postives = 72/148 (48.65%), Query Frame = 2
Query:  140 NTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKSK--DSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIINVTL 577
            +TS G   VEL+   +P+T   F  L Q+GY+  + FH +I N+++Q G               K   ++  + KH    I ++ +   ++ G + +IT AP P L+ K  +FGRV  G  V+Q +  V T+   +P   V I+   +
Sbjct:    8 DTSMGSFTVELYNAHAPKTCKNFATLAQRGYYNNVIFHRIIPNFMVQTGDPTGTGRGGSSIYGEKFEDEINPNLKHTGAGILSMANSGPNNNGSQFFITLAPQPWLDGKHTIFGRVKSGMRVIQRMGLVKTNSEDRPVDGVKILRARI 155          
BLAST of FC923643 vs. ExPASy Swiss-Prot
Match: PPIL3_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Mus musculus GN=Ppil3 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.852e-13
Identity = 42/150 (28.00%), Postives = 77/150 (51.33%), Query Frame = 2
Query:  137 LNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKSK--DSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEH-YQPKSDVGIINVTL 577
            L+T  G I +E+F + +P+T + F+ LC   Y+ G  FH  IK +++Q G               K   +     KH    + ++ +   ++ G + +IT    P L+ K  VFG+V+ G + + E+E++  +E  Y+P +DV I ++T+
Sbjct:    5 LHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCVFHRNIKGFMVQTGDPTGTGRGGSSIWAKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITI 154          
BLAST of FC923643 vs. ExPASy Swiss-Prot
Match: PPID_USTMA (Peptidyl-prolyl cis-trans isomerase D OS=Ustilago maydis GN=CPR6 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.852e-13
Identity = 50/152 (32.89%), Postives = 76/152 (50.00%), Query Frame = 2
Query:  158 IIVELFKDGSPETVDKFIDLC----------QKGYFKGMSFHHVIKNYVIQAGHSKDLAAAD----EWTSRGKIRSQLRTSPKHEAFMIGTVKS-KDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIIN 568
            I++EL+ D  P T + F  LC          Q   F+   FH VI  ++IQ G   D   AD    E     K + +  T      F++    +  ++ G + +ITT P P L+ K +VFGRV+KG+ VV+ +E V+T    +PK DV I++
Sbjct:   34 IVLELYADRVPRTAENFRVLCTNTSKLASTGQPLSFRNSIFHRVIPKFMIQGG---DFTRADGTGGESIYGEKFQDEDLTGKHDVPFLLSMANAGANTNGSQFFITTVPTPHLDGKHVVFGRVLKGKGVVRRVESVETVASDRPKEDVKIVD 182          
BLAST of FC923643 vs. ExPASy Swiss-Prot
Match: PPIL3_RAT (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Rattus norvegicus GN=Ppil3 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.949e-13
Identity = 42/150 (28.00%), Postives = 77/150 (51.33%), Query Frame = 2
Query:  137 LNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKSK--DSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEH-YQPKSDVGIINVTL 577
            L+T  G I +E+F + +P+T + F+ LC   Y+ G  FH  IK +++Q G               K   +     KH    + ++ +   ++ G + +IT    P L+ K  VFG+V+ G + + E+E++  +E  Y+P +DV I ++T+
Sbjct:    5 LHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCVFHRNIKGFMVQTGDPTGTGRGGSSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITI 154          
BLAST of FC923643 vs. ExPASy Swiss-Prot
Match: PPIL3_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Homo sapiens GN=PPIL3 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.949e-13
Identity = 42/150 (28.00%), Postives = 77/150 (51.33%), Query Frame = 2
Query:  137 LNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKSK--DSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEH-YQPKSDVGIINVTL 577
            L+T  G I +E+F + +P+T + F+ LC   Y+ G  FH  IK +++Q G               K   +     KH    + ++ +   ++ G + +IT    P L+ K  VFG+V+ G + + E+E++  +E  Y+P +DV I ++T+
Sbjct:    5 LHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTGRGGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITI 154          
BLAST of FC923643 vs. ExPASy Swiss-Prot
Match: PPIL1_SCHPO (Peptidyl-prolyl cis-trans isomerase ppi1 OS=Schizosaccharomyces pombe GN=ppi1 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.949e-13
Identity = 44/145 (30.34%), Postives = 73/145 (50.34%), Query Frame = 2
Query:  137 LNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKS--KDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGII 565
            L TS G I++EL+ + +P+T   F  L ++GY+ G+ FH VI ++VIQ G               K   ++ +   H    I ++ +   ++   + +IT AP P L+ K  +FGRVV G  V + +  + TD   +P   + II
Sbjct:    6 LQTSLGKILIELYTEHAPKTCQNFYTLAKEGYYDGVIFHRVIPDFVIQGGDPTGTGRGGTSIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVVSGLSVCKRMGLIRTDSSDRPIEPLKII 150          
BLAST of FC923643 vs. ExPASy Swiss-Prot
Match: PPID_GIBZE (Peptidyl-prolyl cis-trans isomerase D OS=Gibberella zeae GN=CPR6 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.949e-13
Identity = 50/156 (32.05%), Postives = 78/156 (50.00%), Query Frame = 2
Query:  146 SKGYIIVELFKDGSPETVDKFIDLC--QKG--------YFKGMSFHHVIKNYVIQAGHSKDLAAAD----EWTSRGKIRSQLRTSPKHEAFMIGTVKS-KDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIIN 568
            S G I +EL+ D  P+T D F  LC  +KG        ++KG  FH VIK ++IQ G   D  A D    E     K   +       + F++    +  ++ G + +ITT P P L+ K +VFG V+ G+ VV++IE + T    +P  +  I++
Sbjct:   23 SVGRITMELYADLVPKTADNFRSLCTGEKGIGKSGKPLHYKGSVFHRVIKQFMIQGG---DFTAGDGTGGESIYGNKFDDEAFPIKHEKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGEVLNGKSVVRQIENLTTQSGDRPAKEALIVD 175          
BLAST of FC923643 vs. ExPASy Swiss-Prot
Match: PPID_DEBHA (Peptidyl-prolyl cis-trans isomerase D OS=Debaryomyces hansenii GN=CPR6 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.949e-13
Identity = 44/150 (29.33%), Postives = 78/150 (52.00%), Query Frame = 2
Query:  149 KGYIIVELFKDGSPETVDKFIDLC--QKG---------YFKGMSFHHVIKNYVIQAG---HSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKS-KDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSD 553
            KG ++ EL+ D  P+T + F  LC  +KG         ++KG  FH +IK+++ Q G   H   +     +  + +  +   T  K   F++    +  ++ G + +ITT P P LN K +VFG V++G+ +V+++E  D  E+ +P  D
Sbjct:   21 KGRVVFELYNDVVPKTAENFRALCTGEKGASESSGKQLHYKGSIFHRIIKDFMCQGGDFTHGSGIGGESIYGEKFEDENFQLTHDK--PFLLSMANAGANTNGSQFFITTVPTPHLNGKHVVFGEVIQGKSIVRQLERCDKGENDKPVED 168          
BLAST of FC923643 vs. ExPASy Swiss-Prot
Match: PPIL3_RHIOR (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Rhizopus oryzae GN=cyp4 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.169e-12
Identity = 47/157 (29.94%), Postives = 82/157 (52.23%), Query Frame = 2
Query:  137 LNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRG-------KIRSQLRTSPKHEAFMIGTVKSK--DSKGFELYITTAPIPDLNDKLIVFGRVVKGED-VVQEIEEVDTDEHYQPKSDVGIINVTL 577
            L+T  G I +E+F +  P+T + F+ LC  GY+   +FH  I  ++IQ  H          T +G       K   ++R++ KH +  I ++ +   ++ G + +IT A  P L+ K  VFG+V+ G D  +  +E+V  DE ++P  +  I +VT+
Sbjct:    5 LHTDLGDIKIEVFCEAVPKTAENFLALCASGYYDNNTFHRNIPGFMIQV-HEHLHTGDPTGTGKGGNSIWGKKFNDEIRSTLKHNSRGIVSMANSGPNTNGSQFFITYAKHPHLDTKYTVFGKVIDGADSTLDMMEKVPVDEKHRPLQEFRIKSVTI 160          
BLAST of FC923643 vs. ExPASy Swiss-Prot
Match: PPIL2_SCHPO (Peptidyl-prolyl cis-trans isomerase cyp8 OS=Schizosaccharomyces pombe GN=cyp8 PE=2 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 1.526e-12
Identity = 44/168 (26.19%), Postives = 83/168 (49.40%), Query Frame = 2
Query:   80 AEDDAYAVSKKFDLPGHAVLNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTV--KSKDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIINVTL 577
            AE+D      +    G+A + T+ G I +EL  D +P  V  F+ L ++GY++   FH  I  ++IQ G         +       + +     KH+   I ++  + K++ G + +I   P   L++K  +FGRVV G +V+  +E+V T+ +  PK  + + ++ +
Sbjct:  261 AEEDYMLNHTRIKHKGYARIVTNHGEINIELHTDYAPHAVYNFVQLAKQGYYRNTIFHRNIARFMIQGGDPSGTGRGGQSIWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRVVGGLNVLDALEKVPTNSNDHPKLPIKLEDIII 428          
The following BLAST results are available for this feature:
BLAST of FC923643 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
PPIL1_ASPNG5.246e-1329.05Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspe... [more]
PPIL3_MOUSE6.852e-1328.00Peptidyl-prolyl cis-trans isomerase-like 3 OS=Mus ... [more]
PPID_USTMA6.852e-1332.89Peptidyl-prolyl cis-trans isomerase D OS=Ustilago ... [more]
PPIL3_RAT8.949e-1328.00Peptidyl-prolyl cis-trans isomerase-like 3 OS=Ratt... [more]
PPIL3_HUMAN8.949e-1328.00Peptidyl-prolyl cis-trans isomerase-like 3 OS=Homo... [more]
PPIL1_SCHPO8.949e-1330.34Peptidyl-prolyl cis-trans isomerase ppi1 OS=Schizo... [more]
PPID_GIBZE8.949e-1332.05Peptidyl-prolyl cis-trans isomerase D OS=Gibberell... [more]
PPID_DEBHA8.949e-1329.33Peptidyl-prolyl cis-trans isomerase D OS=Debaryomy... [more]
PPIL3_RHIOR1.169e-1229.94Peptidyl-prolyl cis-trans isomerase-like 3 OS=Rhiz... [more]
PPIL2_SCHPO1.526e-1226.19Peptidyl-prolyl cis-trans isomerase cyp8 OS=Schizo... [more]

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Properties
Property NameValue
Genbank descriptionC31707D08EF StrClemenN Citrus clementina cDNA clone C31707D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923643 ID=FC923643; Name=FC923643; organism=Citrus clementina; type=EST; length=697bp
GTTGTGCTTAGTTGTCACATATAGACATTGGTCGCATTCACCAAGGTCAA
ATGAACAAATAGGGAATGAATCGTCAACCGCTGAGGATGATGCCTATGCG
GTTTCAAAGAAGTTTGATCTTCCTGGCCATGCTGTTTTAAATACATCTAA
AGGTTATATAATAGTGGAACTCTTCAAAGATGGTTCACCTGAAACCGTGG
ATAAATTTATTGACTTGTGTCAAAAGGGGTACTTCAAAGGTATGTCTTTC
CATCATGTGATAAAAAACTATGTCATTCAAGCTGGGCATTCCAAGGATCT
TGCAGCTGCTGATGAATGGACATCAAGAGGGAAGATCCGCAGTCAGCTGA
GGACCAGTCCGAAGCATGAGGCGTTTATGATTGGAACTGTAAAATCTAAA
GACAGCAAAGGATTTGAGCTATACATTACAACTGCACCAATACCAGATTT
AAATGATAAGCTTATTGTGTTTGGACGAGTAGTGAAGGGTGAGGATGTGG
TGCAGGAAATTGAAGAGGTGGATACAGATGAGCACTATCAGCCTAAGTCA
GATGTAGGGATCATCAATGTGACACTAAAGCATGCGATATGAGGATGTAT
GCTAAGCTACCGAAAAGATTTTACACCTAGCCAAGTTTCTTGTTGTGCTA
TTGATTTTCGTATTAATCTTGTATTGCTGCTGCTAGAACGCTTGGTT
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