FC923643

Overview
NameFC923643
Unique NameFC923643
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length697
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923643 vs. ExPASy Swiss-Prot
Match: PPIL1_GIBZE (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Gibberella zeae GN=CYP1 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.401e-12
Identity = 40/146 (27.40%), Postives = 72/146 (49.32%), Query Frame = 2
Query:  134 VLNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKS--KDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGII 565
            VL T+ G +I+EL+   +P+T + F  L ++GY+    FH +I N+++Q G               K   ++    KH    I ++ +   ++ G + ++T AP P L+ K  +FGRV  G   ++ +  V T    +P  +V I+
Sbjct:    6 VLETTMGSLILELYTTHAPKTCNNFTTLVRRGYYDNTIFHRIIPNFMVQGGDPTGTGRGGSSIFGEKFEDEIDPGLKHTGAGILSMANAGPNTNGSQFFVTLAPTPWLDGKHTIFGRVKSGMGTIKRMGLVKTGSEDRPVEEVKIV 151          
BLAST of FC923643 vs. ExPASy Swiss-Prot
Match: PPID_EMENI (Peptidyl-prolyl cis-trans isomerase D OS=Emericella nidulans GN=cpr6 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.401e-12
Identity = 51/149 (34.23%), Postives = 74/149 (49.66%), Query Frame = 2
Query:  152 GYIIVELFKDGSPETVDKFIDLC--QKG--------YFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEA-FMIGTVKS-KDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGI 562
            G I  ELF D  P+T + F  LC  +KG        +FKG  FH VIK ++IQ G           +  G+         KH+  F++    S   + G + +ITT P P L+ K +VFG V+ G+ VV++IE + T    +P +DV I
Sbjct:   21 GRIAFELFNDVVPKTAENFRALCTGEKGMGKQGKPLHFKGSIFHRVIKQFMIQGGDFTAFNGTGGESIYGEKFPDENFELKHDRPFLLSMANSGPGTNGSQFFITTVPTPHLDGKHVVFGEVINGKSVVRKIENMPTQAD-KPTTDVTI 168          
BLAST of FC923643 vs. ExPASy Swiss-Prot
Match: PPIB_YARLI (Peptidyl-prolyl cis-trans isomerase B OS=Yarrowia lipolytica GN=CPR2 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.401e-12
Identity = 51/147 (34.69%), Postives = 75/147 (51.02%), Query Frame = 2
Query:  146 SKGYIIVELFKDGSPETVDKFIDLCQ----KGYFKGMSFHHVIKNYVIQAGH-SKDLAAADEWTSRGKIRS---QLRTSPKHEAFMIGTVKSKDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGI 562
            S G I++ L+ D  P+TV+ F  LC     KGY KG  FH VIKN++IQ G  ++      E     K      QL+ +  ++  M      +D+ G + +ITT     L+ K +VFG V++G+D+V  IE   T     PK D+ I
Sbjct:   44 SLGKIVMGLYGDVVPKTVENFRALCTGETGKGY-KGSKFHRVIKNFMIQGGDFTRGDGTGGESIYGRKFPDENFQLKHTKPYKLSMANA--GRDTNGSQFFITTVVTSWLDGKHVVFGEVLEGQDIVDAIENAPTGARSNPKVDITI 187          
BLAST of FC923643 vs. ExPASy Swiss-Prot
Match: PPIB_CHICK (Peptidyl-prolyl cis-trans isomerase B OS=Gallus gallus GN=PPIB PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.441e-12
Identity = 49/145 (33.79%), Postives = 76/145 (52.41%), Query Frame = 2
Query:  152 GYIIVELFKDGSPETVDKFIDLC--QKGY-FKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSP-KHEAFMIGTVK----SKDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGI 562
            G +++ LF    P+TV+ F+ L   +KG+ FKG  FH VIK+++IQ G   D    D    +     +      K + +  G V      KD+ G + +ITT     L+ K +VFG+V++G DVV+++E   TD   +P  DV I
Sbjct:   49 GRVVIGLFGKTVPKTVENFVALATGEKGFGFKGSKFHRVIKDFMIQGG---DFTRGDGTGGKSIYGDRFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMDVVRKVENTKTDSRDKPLKDVTI 190          
BLAST of FC923643 vs. ExPASy Swiss-Prot
Match: CYPE_DICDI (Peptidyl-prolyl cis-trans isomerase cypE OS=Dictyostelium discoideum GN=cypE PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.441e-12
Identity = 44/148 (29.73%), Postives = 75/148 (50.68%), Query Frame = 2
Query:  137 LNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKSK--DSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIINVT 574
            L T+ G I +EL+ + +P+    F +L ++GY+    FH +IK+++IQ G         E     K   ++    KH    I ++ +   +S G + +IT  P P L+ K  +FGRV  G  VVQ++  + T+   +P  ++ II  T
Sbjct:    8 LQTTVGDITLELYYNHAPKACKNFYELSKRGYYDNTIFHRLIKDFMIQGGDPLGNGRGGESIYGKKFEDEITKELKHTGAGILSMANSGVNSNGSQFFITFGPTPWLDGKHTIFGRVKSGMKVVQKMNAMQTNND-KPIDEIRIIKAT 154          
BLAST of FC923643 vs. ExPASy Swiss-Prot
Match: CYP4_CAEEL (Peptidyl-prolyl cis-trans isomerase 4 OS=Caenorhabditis elegans GN=cyn-4 PE=2 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 4.441e-12
Identity = 44/152 (28.95%), Postives = 77/152 (50.66%), Query Frame = 2
Query:  137 LNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKSKDS--KGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIINVTLKHA 586
            L T+ G + +ELF    P+  + FI  C  GY+    FH +IKN+++Q G         E         +  +   H+A  + ++ +K S   G + +IT  P   L+ K  +FGR+V G+D +  IE+++T+E     +DV +++V +  A
Sbjct:  284 LVTNFGPLNLELFAPKVPKACENFITHCSNGYYNNTKFHRLIKNFMLQGGDPTGTGHGGESIWDKPFSDEFISGFSHDARGVLSMANKGSNTNGSQFFITFRPCKYLDRKHTIFGRLVGGQDTLTTIEKLETEE----GTDVPMVSVVIMRA 431          
BLAST of FC923643 vs. ExPASy Swiss-Prot
Match: PPIL3_DICDI (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Dictyostelium discoideum GN=ppil3 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.801e-12
Identity = 42/149 (28.19%), Postives = 75/149 (50.34%), Query Frame = 2
Query:  137 LNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKSK--DSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIINVTL 577
            L+TS G I VE+F D  P   + F+ LC   Y+    FH  IK ++IQ G   +     E   + + + +  +  KH    I ++ +   D+ G + +IT      LN    VFG+++ G +V+  +E+V  D+   P +++ + +VT+
Sbjct:    5 LHTSLGDIKVEIFCDSVPLASENFLALCASNYYNNTIFHRNIKGFMIQGGDPTNTGRGGESIWKKQFKDEFPSHLKHNTRGILSMANSGPDTNGSQFFITYGKHRSLNKVYTVFGKIIAGIEVLDLMEKVPVDDKDLPLNEIILKSVTI 153          
BLAST of FC923643 vs. ExPASy Swiss-Prot
Match: PPID_RHIOR (Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus oryzae GN=cyp12 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.801e-12
Identity = 47/141 (33.33%), Postives = 74/141 (52.48%), Query Frame = 2
Query:  140 NTSKGYIIVELFKDGSPETVDKFIDLC--QKGY--------FKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEA-FMIGTVKS-KDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDT 526
            N  +G I+ ELFKD  P+T + F  LC  +KG         ++G  FH +IKN++IQ G           +  G+         KHE  F++    +   + G + +ITT P P L+ K +VFG+V+KG+ VV+ +E ++T
Sbjct:   14 NKPEGRIVFELFKDIVPKTAENFRALCTGEKGEGKSGKPLSYQGSLFHRIIKNFMIQGGDFTAGNGTGGESIYGEKFEDENFVLKHEKPFLLSMANAGPGTNGSQFFITTVPTPHLDGKHVVFGKVLKGKAVVRALENLET 154          
BLAST of FC923643 vs. ExPASy Swiss-Prot
Match: CYP11_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp11 OS=Rhizopus oryzae GN=cyp11 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.801e-12
Identity = 47/152 (30.92%), Postives = 77/152 (50.66%), Query Frame = 2
Query:  152 GYIIVELFKDGSPETVDKFIDLC--QKG---------YFKGMSFHHVIKNYVIQAGHSKDLAAADEWTSRGKIRSQLRTSPKHEAFMIGTVKSK--DSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIIN 568
            G I++ELF D  P+T + F  LC  +KG         ++KG  FH +IK ++ Q G           +  G        S KH+   + ++ ++  +++  + +ITT P P L+ K +VFGRVV G +VV+ +E    D+  +P  +V I N
Sbjct:   18 GRIVIELFADQVPKTAENFRALCTGEKGIGKVSNMPLHYKGSIFHRIIKGFMCQGGDFTHRTGKGGESIYGANFPDESFSRKHDTHGLLSMANRGPNTQTSQFFITTRPTPHLDGKHVVFGRVVSGYNVVEMMENEPVDDQDRPLHNVMIAN 169          
BLAST of FC923643 vs. ExPASy Swiss-Prot
Match: PPIL3_CRYNE (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Cryptococcus neoformans GN=CYP10 PE=3 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 7.576e-12
Identity = 42/151 (27.81%), Postives = 74/151 (49.01%), Query Frame = 2
Query:  137 LNTSKGYIIVELFKDGSPETVDKFIDLCQKGYFKGMSFHHVIKNYVIQAGHSKDLAAADE--W--TSRGKIRSQLRTSPKHEAFMIGTVKSKDSKGFELYITTAPIPDLNDKLIVFGRVVKGEDVVQEIEEVDTDEHYQPKSDVGIINVTL 577
            L+T+ G I +ELF +  P T + F+ LC  G + G  FH  I+ ++IQ G         +  W      +IR  LR + +    M       D+   + +IT A  P L+ K  +FG+V+ G + +  +E+   +   +P  ++ ++NVT+
Sbjct:    5 LHTNLGDIKIELFCESVPRTAENFLALCASGQYDGTLFHRNIRGFMIQGGDPTGTGKGGQSIWGRPFSDEIRQTLRFNNRGMVAMANA--GPDTNKSQFFITYAKQPSLDGKYSIFGKVIDGMETLDSMEKTPVNPKSRPLQEIKLLNVTV 153          
The following BLAST results are available for this feature:
BLAST of FC923643 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
PPIL1_GIBZE3.401e-1227.40Peptidyl-prolyl cis-trans isomerase-like 1 OS=Gibb... [more]
PPID_EMENI3.401e-1234.23Peptidyl-prolyl cis-trans isomerase D OS=Emericell... [more]
PPIB_YARLI3.401e-1234.69Peptidyl-prolyl cis-trans isomerase B OS=Yarrowia ... [more]
PPIB_CHICK4.441e-1233.79Peptidyl-prolyl cis-trans isomerase B OS=Gallus ga... [more]
CYPE_DICDI4.441e-1229.73Peptidyl-prolyl cis-trans isomerase cypE OS=Dictyo... [more]
CYP4_CAEEL4.441e-1228.95Peptidyl-prolyl cis-trans isomerase 4 OS=Caenorhab... [more]
PPIL3_DICDI5.801e-1228.19Peptidyl-prolyl cis-trans isomerase-like 3 OS=Dict... [more]
PPID_RHIOR5.801e-1233.33Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus ... [more]
CYP11_RHIOR5.801e-1230.92Peptidyl-prolyl cis-trans isomerase cyp11 OS=Rhizo... [more]
PPIL3_CRYNE7.576e-1227.81Peptidyl-prolyl cis-trans isomerase-like 3 OS=Cryp... [more]

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Properties
Property NameValue
Genbank descriptionC31707D08EF StrClemenN Citrus clementina cDNA clone C31707D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923643 ID=FC923643; Name=FC923643; organism=Citrus clementina; type=EST; length=697bp
GTTGTGCTTAGTTGTCACATATAGACATTGGTCGCATTCACCAAGGTCAA
ATGAACAAATAGGGAATGAATCGTCAACCGCTGAGGATGATGCCTATGCG
GTTTCAAAGAAGTTTGATCTTCCTGGCCATGCTGTTTTAAATACATCTAA
AGGTTATATAATAGTGGAACTCTTCAAAGATGGTTCACCTGAAACCGTGG
ATAAATTTATTGACTTGTGTCAAAAGGGGTACTTCAAAGGTATGTCTTTC
CATCATGTGATAAAAAACTATGTCATTCAAGCTGGGCATTCCAAGGATCT
TGCAGCTGCTGATGAATGGACATCAAGAGGGAAGATCCGCAGTCAGCTGA
GGACCAGTCCGAAGCATGAGGCGTTTATGATTGGAACTGTAAAATCTAAA
GACAGCAAAGGATTTGAGCTATACATTACAACTGCACCAATACCAGATTT
AAATGATAAGCTTATTGTGTTTGGACGAGTAGTGAAGGGTGAGGATGTGG
TGCAGGAAATTGAAGAGGTGGATACAGATGAGCACTATCAGCCTAAGTCA
GATGTAGGGATCATCAATGTGACACTAAAGCATGCGATATGAGGATGTAT
GCTAAGCTACCGAAAAGATTTTACACCTAGCCAAGTTTCTTGTTGTGCTA
TTGATTTTCGTATTAATCTTGTATTGCTGCTGCTAGAACGCTTGGTT
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