FC923645

Overview
NameFC923645
Unique NameFC923645
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length689
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923645 vs. ExPASy Swiss-Prot
Match: C71B9_ARATH (Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CYP71B9 PE=2 SV=3)

HSP 1 Score: 189.889 bits (481), Expect = 1.091e-47
Identity = 89/182 (48.90%), Postives = 123/182 (67.58%), Query Frame = 2
Query:    5 EMMKNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRLHPSAPLIL-RECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPIPH 547
            E+++NPRVMKK Q+E+R     K  +    I+ + YLK+V+KET RLHP  PL+L RE     EING+ I  K  + VN WA GRDP  W + + F PERF+D+++D KG NFE +PFG+GRRICPGM  G   VE  LA +LY F+W++P+GM  ED+DM E+ G  V +K +L ++P+ +
Sbjct:  316 ELIRNPRVMKKVQSEIRNQMINKSVITLDDIDHLPYLKMVIKETWRLHPPVPLLLPREVMSEFEINGYKIQPKTLLYVNVWAIGRDPDSWKDADMFYPERFMDNNIDAKGQNFELLPFGSGRRICPGMYMGTTMVEFGLANMLYQFDWEVPDGMVVEDIDMEESPGLAVGKKNELLLVPVKY 497          
BLAST of FC923645 vs. ExPASy Swiss-Prot
Match: C71BL_ARATH (Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=CYP71B21 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.861e-47
Identity = 90/183 (49.18%), Postives = 124/183 (67.76%), Query Frame = 2
Query:    5 EMMKNPRVMKKAQAEVREVF-NRKGKVDETGINEMKYLKLVVKETLRLHPSAPLIL-RECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPIPH 547
            E+ ++PRVMKK Q E+RE+  + K K+ E  + ++ YLKLV++ET RLHP APL+L RE     +I G+NIP    + +N++A GRDP  WT P  FIPERF+D  +DYKG +FE +PFG GRRICPGM+ G+  VEL L  +LY F+W LP GM   D++M EA    + +K  L ++P+ H
Sbjct:  316 ELTRHPRVMKKLQQEIRELLGDNKEKITEQDLEKVHYLKLVIQETFRLHPPAPLLLPRETMSDVKIQGYNIPKNTMIEINTYAIGRDPNCWTNPNEFIPERFVDSPIDYKGQHFELLPFGGGRRICPGMATGMTIVELGLLNVLYFFDWSLPYGMAIADINMEEAGAFVIAKKVPLELVPVLH 498          
BLAST of FC923645 vs. ExPASy Swiss-Prot
Match: C76C4_ARATH (Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.174e-47
Identity = 89/180 (49.44%), Postives = 118/180 (65.56%), Query Frame = 2
Query:    5 EMMKNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRLHPSAPLIL-RECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPI 541
            E+++NP+ M KAQAE+  V  +   V E+ I+ + YL+ VVKET RLHP+APL++ R+     E+ GF +P   +V+VN WA GRDP  W  P  F PERF+   +D KG ++E  PFG GRRICPG+   + +V L LA LLY F+WKLPNG+  EDLDM E FG T+ R   L  IP+
Sbjct:  326 ELLRNPKTMVKAQAEMDRVLGQNSVVQESDISGLPYLQAVVKETFRLHPAAPLLVPRKAESDVEVLGFMVPKDTQVLVNVWAIGRDPSVWENPSQFEPERFMGKDIDVKGRDYELTPFGGGRRICPGLPLAVKTVSLMLASLLYSFDWKLPNGVVSEDLDMDETFGITLHRTNTLYAIPV 505          
BLAST of FC923645 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.145e-47
Identity = 86/151 (56.95%), Postives = 118/151 (78.15%), Query Frame = 2
Query:    5 EMMKNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRLHPSAPLIL-RECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLP 454
            E++K+P VM+KAQ EVR V  +K KV+E  ++++ YLKL++KETLRLHP APL++ RE      I G++IPAK RV +N+WA GRDP  W   E F+PERF+++SVD+KG +F+ IPFGAGRR CPG++FG++SVE++LA LLY F W+LP
Sbjct:  319 ELIKHPDVMEKAQQEVRRVVGKKAKVEEEDLHQLHYLKLIIKETLRLHPVAPLLVPRESTRDVVIRGYHIPAKTRVFINAWAIGRDPKSWENAEEFLPERFVNNSVDFKGQDFQLIPFGAGRRGCPGIAFGISSVEISLANLLYWFNWELP 469          
BLAST of FC923645 vs. ExPASy Swiss-Prot
Match: C76C2_ARATH (Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.575e-46
Identity = 88/180 (48.89%), Postives = 119/180 (66.11%), Query Frame = 2
Query:    5 EMMKNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRLHPSAPLIL-RECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPI 541
            E+++NP  M KAQAE+  V  +KG V+E+ I+ + YL+ VVKET RLHP+APL++ R+     E+ GF +P   +V VN WA GRDP  W     F PERF+   +D +G ++E  PFGAGRRICPG+   + +V L LA LLY F+WKLPNG+  EDLDM E FG T+ +   L  +P+
Sbjct:  327 ELLRNPETMVKAQAEIDCVIGQKGVVEESDISALPYLQAVVKETFRLHPAAPLLVPRKAESDVEVLGFMVPKDTQVFVNVWAIGRDPNVWENSSRFKPERFLGKDIDLRGRDYELTPFGAGRRICPGLPLAVKTVPLMLASLLYSFDWKLPNGVGSEDLDMDETFGLTLHKTNPLHAVPV 506          
BLAST of FC923645 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.057e-46
Identity = 84/179 (46.93%), Postives = 126/179 (70.39%), Query Frame = 2
Query:    5 EMMKNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSV-DYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIP 538
            E++++P  +K+ Q E+ EV     +V+E+ I ++ YLK  +KETLR+HP  PL+L E  +   I+GF IP K+RV++N++A GRDP  WT+P++F P RF++  V D+KG+NFE+IPFG+GRR CPGM  GL +++L +A +L+ F WKLP+GMK  +LDM + FG T  +   L  +P
Sbjct:  334 ELLRSPEDLKRVQQELAEVVGLDRRVEESDIEKLTYLKCTLKETLRMHPPIPLLLHETAEDTSIDGFFIPKKSRVMINAFAIGRDPTSWTDPDTFRPSRFLEPGVPDFKGSNFEFIPFGSGRRSCPGMQLGLYALDLAVAHILHCFTWKLPDGMKPSELDMNDVFGLTAPKATRLFAVP 512          
BLAST of FC923645 vs. ExPASy Swiss-Prot
Match: C76C3_ARATH (Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CYP76C3 PE=2 SV=2)

HSP 1 Score: 183.726 bits (465), Expect = 7.817e-46
Identity = 84/179 (46.93%), Postives = 119/179 (66.48%), Query Frame = 2
Query:    5 EMMKNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPI 541
            E+ ++   M KAQ+E+R+V  + G V E+ I  + YL+ +VKETLRLHP+APLI R+     +I GF +P   +V+VN WA GRD   W  P  F PERF+    D KG +FE IPFG+GRR+CPG+S  L ++ + LA LLY F+WKL NG+   ++DM+E FG T+ + + LC +P+
Sbjct:  328 ELFRSTEKMVKAQSEIRQVIGQNGFVQESDIPSLPYLQAIVKETLRLHPAAPLIPRKSESDVQIMGFLVPKNTQVVVNVWAIGRDASVWENPMKFEPERFLLRETDVKGRDFELIPFGSGRRMCPGISMALKTMHMVLASLLYSFDWKLQNGVVPGNIDMSETFGLTLHKAKSLCAVPV 506          
BLAST of FC923645 vs. ExPASy Swiss-Prot
Match: C71B2_ARATH (Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CYP71B2 PE=2 SV=2)

HSP 1 Score: 183.341 bits (464), Expect = 1.021e-45
Identity = 83/181 (45.86%), Postives = 125/181 (69.06%), Query Frame = 2
Query:    5 EMMKNPRVMKKAQAEVREVFN-RKGKVDETGINEMKYLKLVVKETLRLHPSAPLIL-RECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPI 541
            E+++NPRVMKKAQ  +R     +K ++ E  + +++YL  ++KET RLHP+ P ++ RE     +I G++IP K ++ +N W  GRDP  W +PE F PERF + SVD++G +F+ +PFG+GRRICPGM   +ASVEL L  LLY+F+W +P+G K ED+DM EA   ++ +K  L ++P+
Sbjct:  319 ELIRNPRVMKKAQESIRTTLGLKKERITEEDLGKVEYLNHILKETFRLHPALPFVVPRETMSHIKIQGYDIPPKTQIQLNVWTIGRDPKRWNDPEEFNPERFANSSVDFRGQHFDLLPFGSGRRICPGMPMAIASVELALMNLLYYFDWSMPDGTKGEDIDMEEAGNISIVKKIPLQLVPV 499          
BLAST of FC923645 vs. ExPASy Swiss-Prot
Match: C71B7_ARATH (Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CYP71B7 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.333e-45
Identity = 83/183 (45.36%), Postives = 127/183 (69.40%), Query Frame = 2
Query:    5 EMMKNPRVMKKAQAEVREVF-NRKGKVDETGINEMKYLKLVVKETLRLHPSAPLIL-RECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPIPH 547
            E+++NPRVMKK Q E+R    ++K ++ E  ++++ Y KLVVKE  RLHP+APL+L RE     +I G++IP K ++++N ++  RDP  WT P+ F P+RF+D S+DY+G NFE +PFG+GRRICPGM+ G+ +VEL L  LLY F+W +P G   +D+++ E     + +K  L ++P+ H
Sbjct:  321 ELIRNPRVMKKVQDEIRTTLGDKKQRITEQDLSQVHYFKLVVKEIFRLHPAAPLLLPRETMSHVKIQGYDIPVKTQMMINIYSIARDPKLWTNPDEFNPDRFLDSSIDYRGLNFELLPFGSGRRICPGMTLGITTVELGLLNLLYFFDWVVPVGKNVKDINLEETGSIIISKKTTLELVPLVH 503          
BLAST of FC923645 vs. ExPASy Swiss-Prot
Match: C76C1_ARATH (Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.274e-45
Identity = 87/180 (48.33%), Postives = 117/180 (65.00%), Query Frame = 2
Query:    5 EMMKNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRLHPSAPLIL-RECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPI 541
            E++KNP+ M KAQAE+  V  + G V+E+ I+++ YL+ VVKET RLH   PL++ R+     EI GF +    +V+VN WA GRDP  W  P  F PERF+   +D +G ++E  PFGAGRRICPGM   + +V L LA LLY F+WKLP G+  EDLDM E FG T+ +   L  +P+
Sbjct:  326 ELLKNPKTMAKAQAEIDCVIGQNGIVEESDISKLPYLQAVVKETFRLHTPVPLLIPRKAESDAEILGFMVLKDTQVLVNVWAIGRDPSVWDNPSQFEPERFLGKDMDVRGRDYELTPFGAGRRICPGMPLAMKTVSLMLASLLYSFDWKLPKGVLSEDLDMDETFGLTLHKTNPLHAVPV 505          
The following BLAST results are available for this feature:
BLAST of FC923645 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 472
Match NameE-valueIdentityDescription
C71B9_ARATH1.091e-4748.90Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CY... [more]
C71BL_ARATH1.861e-4749.18Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=C... [more]
C76C4_ARATH3.174e-4749.44Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CY... [more]
C71A1_PERAE4.145e-4756.95Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]
C76C2_ARATH1.575e-4648.89Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CY... [more]
C84A1_ARATH2.057e-4646.93Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]
C76C3_ARATH7.817e-4646.93Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CY... [more]
C71B2_ARATH1.021e-4545.86Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CY... [more]
C71B7_ARATH1.333e-4545.36Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CY... [more]
C76C1_ARATH2.274e-4548.33Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CY... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31707D10EF StrClemenN Citrus clementina cDNA clone C31707D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923645 ID=FC923645; Name=FC923645; organism=Citrus clementina; type=EST; length=689bp
GTATGAAATGATGAAAAATCCTAGAGTGATGAAGAAGGCACAAGCTGAGG
TGAGAGAAGTGTTTAATAGAAAAGGAAAGGTCGATGAAACGGGCATCAAT
GAAATGAAATACTTGAAGCTGGTTGTCAAAGAGACCCTGAGATTACATCC
TTCTGCACCTTTAATTCTAAGAGAATGTGGAGACAGTTGTGAGATTAACG
GATTCAACATTCCTGCAAAAGCCAGAGTCATTGTTAATTCATGGGCAACT
GGAAGAGATCCCATGTATTGGACTGAACCTGAGAGCTTTATTCCCGAGAG
ATTCATTGACCATTCTGTTGACTACAAGGGGACTAATTTTGAGTACATCC
CATTTGGTGCTGGTAGGAGGATATGCCCTGGAATGTCATTTGGTCTGGCC
AGCGTGGAGCTTACACTCGCGATGTTATTATACCATTTCGAATGGAAACT
ACCAAATGGAATGAAGCATGAGGATTTGGACATGACAGAGGCCTTTGGCG
CGACAGTAAGAAGAAAACAAGATCTGTGCATGATTCCTATTCCACACTGT
TAAGGAAGCTCACACTTGTAGTGTAGTCAGCAGAGCAGAGGATGATAGTA
GCAGGATCAATCAGTTACACATTGATGATGTGGCATGCCACGTCATGCCT
GGTGATTATGAAATTATGTGTACACGTGATTGATTAGTT
back to top