FC923645

Overview
NameFC923645
Unique NameFC923645
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length689
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923645 vs. ExPASy Swiss-Prot
Match: C71B5_ARATH (Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CYP71B5 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.274e-45
Identity = 84/183 (45.90%), Postives = 122/183 (66.67%), Query Frame = 2
Query:    5 EMMKNPRVMKKAQAEVREVFN-RKGKVDETGINEMKYLKLVVKETLRLHPSAPLIL-RECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPIPH 547
            E+ ++PRVM+K Q E+R      K K+ E  + +++YLK+V++E  RLHP APL+L R       I G++IP    + +N++  GRDP  WT+P+ FIPERF+D+ ++YKG +FE +PFGAGRR+CPGM+ G+  VEL L  LLY F+W LPNGM  +D+DM E     + +K  L ++P  H
Sbjct:  314 ELSRHPRVMRKLQEEIRAALGPNKEKITEEDLEKVEYLKMVIEEAFRLHPPAPLLLPRLTMSDINIQGYSIPKNTMIQINTYTIGRDPKNWTKPDEFIPERFVDNPIEYKGQHFELLPFGAGRRVCPGMATGITIVELGLLSLLYFFDWSLPNGMTTKDIDMEEDGAFVIAKKVSLELVPTLH 496          
BLAST of FC923645 vs. ExPASy Swiss-Prot
Match: C71B1_THLAR (Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.880e-45
Identity = 85/179 (47.49%), Postives = 117/179 (65.36%), Query Frame = 2
Query:    8 MMKNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRLHPSAPLIL-RECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPI 541
            ++ NPRVMKK QAE+RE      ++ +  + ++ Y KLV+KET R+ P  P+++ R      +I G+++P K  + VN WA    P  W +PE+F PERFID+  D+KG NFE +PFG+GRR+CPGM  GLA V LTL  LLY F+WKLPNGMK E+L + E +G    +K  L  IP+
Sbjct:  313 LLANPRVMKKLQAEIREKIKNIDEITDDDVEQLDYFKLVLKETFRISPIVPVLVPRVAAKDLKIAGYDVPEKTWIHVNMWAVHMSPSIWKDPETFNPERFIDNQTDFKGLNFELLPFGSGRRMCPGMGMGLAVVHLTLINLLYRFDWKLPNGMKAEELSIEENYGLICVKKLPLEAIPV 491          
BLAST of FC923645 vs. ExPASy Swiss-Prot
Match: C71E1_SORBI (4-hydroxyphenylacetaldehyde oxime monooxygenase OS=Sorghum bicolor GN=CYP71E1 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.618e-45
Identity = 91/180 (50.56%), Postives = 121/180 (67.22%), Query Frame = 2
Query:    5 EMMKNPRVMKKAQAEVRE-VFNRKGKVDETGINEMKYLKLVVKETLRLHPSAPLIL-RECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIP 538
            E+M+ P+V++KAQAEVR  V + K +V+     ++ YLK+VVKETLRLHP A L++ RE      I G+++PA  RV VN+WA GRDP  W  P+ F P+RF+   VDY G++FE IPFGAGRRICPG++ G  +V  TLA LLY ++W LP  MK ED+ M E    T  RK  L ++P
Sbjct:  343 ELMRKPQVLRKAQAEVRAAVGDDKPRVNSEDAAKIPYLKMVVKETLRLHPPATLLVPRETMRDTTICGYDVPANTRVFVNAWAIGRDPASWPAPDEFNPDRFVGSDVDYYGSHFELIPFGAGRRICPGLTMGETNVTFTLANLLYCYDWALPGAMKPEDVSMEETGALTFHRKTPLVVVP 522          
BLAST of FC923645 vs. ExPASy Swiss-Prot
Match: C71BU_ARATH (Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=CYP71B31 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.618e-45
Identity = 85/180 (47.22%), Postives = 123/180 (68.33%), Query Frame = 2
Query:    5 EMMKNPRVMKKAQAEVREVFN-RKGKVDETGINEMKYLKLVVKETLRLHPSAPLIL-RECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIP 538
            E+ ++PRVMKK Q E+R      K ++ E  + +++YL LV+KE+ RLHP APL+L RE     EI G++IP  A V +N++A GRDP  WT PE F PERF++ S++YKG ++E +PFGAGRR CPGM+ G+  +EL L  +LY+F+W LP+GM  +D+DM E     + +K  L ++P
Sbjct:  316 ELTRHPRVMKKLQEEIRATLGPNKERITEEDLEKVEYLNLVIKESFRLHPPAPLLLPRETMSDIEIQGYHIPKNAHVKINTYAIGRDPKRWTNPEEFNPERFLNTSINYKGQHYELLPFGAGRRNCPGMTLGITILELGLLNILYYFDWSLPSGMTIKDIDMEEDGALNIAKKVPLQLVP 495          
BLAST of FC923645 vs. ExPASy Swiss-Prot
Match: C71B8_ARATH (Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CYP71B8 PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.925e-44
Identity = 84/180 (46.67%), Postives = 122/180 (67.78%), Query Frame = 2
Query:    5 EMMKNPRVMKKAQAEVREVFN-RKGKVDETGINEMKYLKLVVKETLRLHPSAPLIL-RECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIP 538
            E+ ++PRVMKK + E+R      K ++ E  + +++YLKLV+KET RLHP  P +L R+     EI G++IP  A + ++++A GRDP  WT PE F PERF + S++YKG ++E +PFGAGRR CPGM+ G+  +EL L  +LY+F+W LPNGM  +D+DM E    T+ +K  L +IP
Sbjct:  318 ELTRHPRVMKKLREEIRATLGPNKERITEEDLEKVEYLKLVIKETFRLHPPGPFLLPRQVMSDIEIQGYHIPKNAHIKISTYAIGRDPKCWTNPEEFNPERFANTSINYKGQHYELLPFGAGRRSCPGMTLGITILELGLLNILYYFDWSLPNGMTIKDIDMEEDGALTIAKKVPLELIP 497          
BLAST of FC923645 vs. ExPASy Swiss-Prot
Match: C71A2_SOLME (Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.284e-44
Identity = 85/183 (46.45%), Postives = 122/183 (66.67%), Query Frame = 2
Query:    5 EMMKNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRLHPSAPLIL--RECGDSCEINGF-NIPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPIP 544
            E+++ PR +K  Q EVR +   K ++ E  +  M+YL+ V+KE+LRLHP+   +L  RE  +   + G+ +IPA+ + I+N+WA GRDP+ W  PE + PERF++   D KG NF+ +PFGAGRR CPG SF +A +EL LA L++ F++ LP G+K EDLDMTE  G T RRK  L ++  P
Sbjct:  322 ELLRQPRALKTLQDEVRGLAQGKSEITEDDLKNMQYLRAVIKESLRLHPTQESLLVPRESMEDVNLLGYYHIPARTQAIINAWAIGRDPLSWENPEEYQPERFLNSDADVKGLNFKLLPFGAGRRGCPGSSFAIAVIELALARLVHKFDFALPEGIKPEDLDMTETIGITTRRKLPLLVVATP 504          
BLAST of FC923645 vs. ExPASy Swiss-Prot
Match: C71C3_MAIZE (Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.602e-44
Identity = 92/190 (48.42%), Postives = 128/190 (67.37%), Query Frame = 2
Query:    5 EMMKNPRVMKKAQAEVREVFNRKGKVD---ETGINEMKYLKLVVKETLRLHPSAPLILRECGDS-CEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFI----DHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHED----LDMTEAFGATVRRKQDLCMIP 538
            E+M + RVMKK QAEVR  +  + K+D   E  ++ + YLK  +KE LRLHP  PL+L     + C+I+G++IPA  RV+VN WA GRDP  W +PE F+PERF+    D S  Y G +F Y+PFG+GRRICPG +FGLA++E+ LA L+YHF+W++PN  + ED    + M E FG  +RR + L ++P
Sbjct:  345 ELMNHRRVMKKLQAEVR-AYGAEKKLDMIREDDLSSLPYLKASMKEALRLHPPGPLLLPHYSTADCQIDGYHIPANPRVLVNGWAIGRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFGLATMEIMLANLMYHFDWEVPN--EKEDGCWKVSMDEKFGLMLRRNELLYLVP 531          
BLAST of FC923645 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.129e-43
Identity = 80/152 (52.63%), Postives = 113/152 (74.34%), Query Frame = 2
Query:    5 EMMKNPRVMKKAQAEVREVF-NRKGKVDETGINEMKYLKLVVKETLRLHPSAPLIL-RECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLP 454
            E+++NPRVMKK Q E+R    ++K ++ E  +N++ Y KL+VKE  RLHP+APL+L RE     +I G++IPAK ++++N++A  RDP  WT P+ F P+RF+D S+DY+G NFE +PFG+GRRICPGM+ G+A VEL L  LLY F+W LP
Sbjct:  315 ELIRNPRVMKKVQDEIRTTLGDKKERITEEDLNQLHYFKLMVKEIFRLHPAAPLLLPRETLSHVKIQGYDIPAKTQIMINAYAIARDPKLWTNPDEFNPDRFLDSSIDYRGLNFELLPFGSGRRICPGMTMGIAIVELGLLNLLYFFDWGLP 466          
BLAST of FC923645 vs. ExPASy Swiss-Prot
Match: C71A4_SOLME (Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71A4 PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.742e-43
Identity = 83/182 (45.60%), Postives = 120/182 (65.93%), Query Frame = 2
Query:    5 EMMKNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRLHPSAPLIL-RECGDSCEINGF-NIPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPIP 544
            ++++ PR MK  Q EVR +   K ++ E  +  M+YL+ V+KE+LRLHP   L++ RE  +  ++ G+ +IPA+ + ++N WA GRDP+ W  PE F PERF+++ +D KG  FE +PFG+GRR CPG SF +A +EL LA L++ F + LP G K EDLDMTE  G   RRK  L ++  P
Sbjct:  323 DVLRQPRAMKTLQNEVRGLAQGKSEITEDDLKNMQYLRAVIKESLRLHPPNSLLVPRESMEDVKLLGYYHIPARTQALINVWAIGRDPLSWENPEEFCPERFLNNDIDMKGLKFELLPFGSGRRGCPGSSFAIAVIELALARLVHKFNFALPKGTKPEDLDMTECTGIATRRKSPLPVVATP 504          
BLAST of FC923645 vs. ExPASy Swiss-Prot
Match: C71C1_MAIZE (Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.089e-43
Identity = 90/194 (46.39%), Postives = 121/194 (62.37%), Query Frame = 2
Query:    5 EMMKNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRLHPSAPLILRECGD-SCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFI----DHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKH--EDLDMTEAFGATVRRKQDLCMIP-IPHC*GSS 562
            E+M N  V+ K Q EVR        V E  ++ M YLK  +KE++R+HP AP +L       CEING+ IPA  RVIVN+WA  RDP  W + E F PERF+    D  VD  G +  ++PFGAGRRIC G +F +A+VE+ LA L+YHF+W++P  M+     +DM++ FG T+RR Q L ++P IP C  SS
Sbjct:  342 ELMNNRHVLAKLQKEVRTATPDGRMVMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALARDPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLANLIYHFDWEMPAEMERTGAKVDMSDQFGMTLRRTQKLYLVPRIPKCVSSS 535          
The following BLAST results are available for this feature:
BLAST of FC923645 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 472
Match NameE-valueIdentityDescription
C71B5_ARATH2.274e-4545.90Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CY... [more]
C71B1_THLAR3.880e-4547.49Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1... [more]
C71E1_SORBI6.618e-4550.564-hydroxyphenylacetaldehyde oxime monooxygenase OS... [more]
C71BU_ARATH6.618e-4547.22Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=C... [more]
C71B8_ARATH1.925e-4446.67Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CY... [more]
C71A2_SOLME3.284e-4446.45Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71... [more]
C71C3_MAIZE5.602e-4448.42Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 S... [more]
C71BS_ARATH2.129e-4352.63Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
C71A4_SOLME4.742e-4345.60Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71... [more]
C71C1_MAIZE8.089e-4346.39Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 S... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31707D10EF StrClemenN Citrus clementina cDNA clone C31707D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923645 ID=FC923645; Name=FC923645; organism=Citrus clementina; type=EST; length=689bp
GTATGAAATGATGAAAAATCCTAGAGTGATGAAGAAGGCACAAGCTGAGG
TGAGAGAAGTGTTTAATAGAAAAGGAAAGGTCGATGAAACGGGCATCAAT
GAAATGAAATACTTGAAGCTGGTTGTCAAAGAGACCCTGAGATTACATCC
TTCTGCACCTTTAATTCTAAGAGAATGTGGAGACAGTTGTGAGATTAACG
GATTCAACATTCCTGCAAAAGCCAGAGTCATTGTTAATTCATGGGCAACT
GGAAGAGATCCCATGTATTGGACTGAACCTGAGAGCTTTATTCCCGAGAG
ATTCATTGACCATTCTGTTGACTACAAGGGGACTAATTTTGAGTACATCC
CATTTGGTGCTGGTAGGAGGATATGCCCTGGAATGTCATTTGGTCTGGCC
AGCGTGGAGCTTACACTCGCGATGTTATTATACCATTTCGAATGGAAACT
ACCAAATGGAATGAAGCATGAGGATTTGGACATGACAGAGGCCTTTGGCG
CGACAGTAAGAAGAAAACAAGATCTGTGCATGATTCCTATTCCACACTGT
TAAGGAAGCTCACACTTGTAGTGTAGTCAGCAGAGCAGAGGATGATAGTA
GCAGGATCAATCAGTTACACATTGATGATGTGGCATGCCACGTCATGCCT
GGTGATTATGAAATTATGTGTACACGTGATTGATTAGTT
back to top