FC923645

Overview
NameFC923645
Unique NameFC923645
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length689
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923645 vs. ExPASy Swiss-Prot
Match: C71BT_ARATH (Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=CYP71B29 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.410e-40
Identity = 75/152 (49.34%), Postives = 105/152 (69.08%), Query Frame = 2
Query:    5 EMMKNPRVMKKAQAEVREVF-NRKGKVDETGINEMKYLKLVVKETLRLHPSAPLIL-RECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLP 454
            E+++N +VMKK Q E+R    ++K ++ E  +  + Y KLVVKE  RLHP+ P +L RE     +I G++IPAK ++++N +A  RDP  WT P+ F P+RF+D S+DYKG NFE +PFG+GRRICPGM+ G+  VE  L  LLY F+W LP
Sbjct:  315 ELVRNRKVMKKVQEEIRTTLGDKKERITEQDLTNLHYFKLVVKEIFRLHPAVPFLLPRETLSHVKIQGYDIPAKTQIMINVYAIARDPKLWTNPDEFNPDRFLDSSIDYKGLNFELLPFGSGRRICPGMTMGITLVEFALLNLLYFFDWGLP 466          
BLAST of FC923645 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.428e-39
Identity = 76/166 (45.78%), Postives = 108/166 (65.06%), Query Frame = 2
Query:    5 EMMKNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRLHPSAPLIL-RECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFG 499
            E+++NPRV KK Q E+  V  R   + ET    + YL+ VVKE+LRLHP  PL+L  +   + +I G++IP  A V+VN WA  RDP  W+ P  + PERF++ ++D KG++F  +PFGAGRR+CPG   G+  V   +  LL+HFEW LP G + ED++M E+ G
Sbjct:  317 ELVRNPRVQKKLQEELDRVVGRDRVMLETDFQNLPYLQAVVKESLRLHPPTPLMLPHKASTNVKIGGYDIPKGANVMVNVWAVARDPKVWSNPLEYRPERFLEENIDIKGSDFRVLPFGAGRRVCPGAQLGINLVASMIGHLLHHFEWSLPEGTRPEDVNMMESPG 482          
BLAST of FC923645 vs. ExPASy Swiss-Prot
Match: F3PH_ARATH (Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana GN=CYP75B1 PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.436e-39
Identity = 81/185 (43.78%), Postives = 119/185 (64.32%), Query Frame = 2
Query:    5 EMMKNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRLHPSAPLILRE-CGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFID----HSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPIP 544
            E++++P +M KAQ E+  V  R   V+E+ I ++ YL+ V+KE  RLHP  PL L     +SCEING++IP  + ++ N WA  RDP  W++P +F PERF+       VD KG++FE IPFGAGRRIC G+S GL +++   A L+  F+W+L  G+  E L+M E++G T++R   L + P P
Sbjct:  317 ELIRHPDIMVKAQEELDIVVGRDRPVNESDIAQLPYLQAVIKENFRLHPPTPLSLPHIASESCEINGYHIPKGSTLLTNIWAIARDPDQWSDPLAFKPERFLPGGEKSGVDVKGSDFELIPFGAGRRICAGLSLGLRTIQFLTATLVQGFDWELAGGVTPEKLNMEESYGLTLQRAVPLVVHPKP 501          
BLAST of FC923645 vs. ExPASy Swiss-Prot
Match: C93A1_SOYBN (Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.155e-39
Identity = 77/183 (42.08%), Postives = 116/183 (63.39%), Query Frame = 2
Query:    5 EMMKNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFI---DHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPIP 544
            E++ NP V++KA+ E+  V  +   V+E+ I  + YL+ +V+ETLRLHP  PL++RE   S  + G++IPAK R+ VN WA GRDP +W +P  F PERFI    + +D +G ++ +IPFG+GRR CPG S     V + LA+++  F+WKL  G  +  +DM E  G T+ R   +  +P+P
Sbjct:  321 ELINNPDVLEKARQEIDAVVGKSRMVEESDIANLPYLQAIVRETLRLHPGGPLVVRESSKSAVVCGYDIPAKTRLFVNVWAIGRDPNHWEKPFEFRPERFIRDGQNQLDVRGQHYHFIPFGSGRRTCPGASLAWQVVPVNLAIIIQCFQWKLVGG--NGKVDMEEKSGITLPRANPIICVPVP 501          
BLAST of FC923645 vs. ExPASy Swiss-Prot
Match: C71AE_ARATH (Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=CYP71A14 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.426e-39
Identity = 82/183 (44.81%), Postives = 118/183 (64.48%), Query Frame = 2
Query:    5 EMMKNPRVMKKAQAEVREVFNRKGK-VDETGINEMKYLKLVVKETLRLHPSAPLIL-RECGDSCEINGFNIPAKARVIVNSWATGRDPMYW-TEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPIP 544
            E++++P  MKK Q E+R    +    + E  + +MKYLK VVKE LRLHP  PL++ RE  +  ++ G++I A  +VI+N+WA  RD M W  + E F PER +D  VD++GTNFE+IPFG+GRRICPG+ F +A VE+TLA L+  F W++      ++ D+ E+ G  V RK  L + P P
Sbjct:  314 ELIRHPECMKKLQDEIRAKATKLILYISEEDVEDMKYLKAVVKEVLRLHPPLPLLVPRELSEDIKLKGYDIAAGTQVIINAWAIQRDTMTWGIDAEEFRPERHLDSLVDFRGTNFEFIPFGSGRRICPGIGFAMALVEVTLANLVNRFNWRMEVQHSGDEYDLAESTGLDVCRKFPLIVFPSP 496          
BLAST of FC923645 vs. ExPASy Swiss-Prot
Match: C93A2_SOYBN (Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.087e-39
Identity = 76/183 (41.53%), Postives = 114/183 (62.30%), Query Frame = 2
Query:    5 EMMKNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFIDH---SVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPIP 544
            E++ NP V++KA+ E+  V      ++E+ I  + YL+ +V+ETLR+HP  PLI+RE   S  + G+ IPAK R+ VN WA GRDP +W  P  F PERF ++    +D +G ++ +IPFG+GRR CPG S  L  V + LA+++  F+WK  NG  +  +DM E  G T+ R   +  +P+P
Sbjct:  314 ELINNPCVLEKARQEIDAVVGNSRIIEESDIVNLPYLQAIVRETLRIHPGGPLIVRESSKSVVVCGYEIPAKTRLFVNVWAIGRDPNHWENPFEFRPERFFENGQSQLDVRGQHYHFIPFGSGRRSCPGTSLALQIVHVNLAIMIQCFQWKFDNG--NNKVDMEEKSGITLPRAHPIICVPVP 494          
BLAST of FC923645 vs. ExPASy Swiss-Prot
Match: C80B1_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.087e-39
Identity = 75/179 (41.90%), Postives = 115/179 (64.25%), Query Frame = 2
Query:    5 EMMKNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRLHPSAPLIL-RECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIP 538
            E+ KNP++  K ++E++ V   +  V E+    + YL+  VKETLRLHP  PL+L R   ++C I  + IP   +++VN+W  GRDP  WT+P +F PERF++ SVD++G +F  IPFGAGRRICPG+      + L +A  + + +W LPNGM  + L + E FG T++++  L ++P
Sbjct:  306 ELTKNPKITAKIRSEIQTVVGERS-VKESDFPNLPYLEATVKETLRLHPPTPLLLPRRALETCTILNYTIPKDCQIMVNAWGIGRDPKTWTDPLTFSPERFLNSSVDFRGNDFSLIPFGAGRRICPGLPIANQFIALLVATFVQNLDWCLPNGMSVDHLIVEEKFGLTLQKEPPLFIVP 483          
BLAST of FC923645 vs. ExPASy Swiss-Prot
Match: C75A2_SOLME (Flavonoid 3',5'-hydroxylase OS=Solanum melongena GN=CYP75A2 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.087e-39
Identity = 81/184 (44.02%), Postives = 111/184 (60.33%), Query Frame = 2
Query:    5 EMMKNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRLHPSAPLIL-RECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHS---VDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPIP 544
            EMMKNP + KKAQ E+ ++  +  +  E+ I  + YL+ + KE  R HPS PL L R   D+C I+G+ IP   R+ VN WA GRDP  W  P  FIPERF+      ++++G +FE IPFGAGRRIC G   G+  VE  L  L++ F+WKLPN +   D++M E FG  +++   L  I  P
Sbjct:  319 EMMKNPTIFKKAQQEMDQIIGKNRRFIESDIPNLPYLRAICKEAFRKHPSTPLNLPRVSSDACTIDGYYIPKNTRLSVNIWAIGRDPDVWENPLEFIPERFLSEKNAKIEHRGNDFELIPFGAGRRICAGTRMGIVMVEYILGTLIHSFDWKLPNDV--VDINMEETFGLALQKAVPLEAIVTP 500          
BLAST of FC923645 vs. ExPASy Swiss-Prot
Match: C71AC_ARATH (Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=CYP71A12 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.087e-39
Identity = 81/181 (44.75%), Postives = 111/181 (61.33%), Query Frame = 2
Query:    5 EMMKNPRVMKKAQAEVREVFNRKGK-VDETGINEMKYLKLVVKETLRLHPSAPLIL-RECGDSCEINGFNIPAKARVIVNSWATGRDPMYW-TEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIP 538
            E+++NP VMKK Q E+R      G  + E  +  MKYLK V+KE  R+HP  PLIL R   +  ++ G+NI A   VI+N+WA  RDP  W  + E F PER +D ++DY G +  +IPFG+GRRICPG++  L  VE+T+A L+  F+W+   G   +  D+TEAFG  V RK  L   P
Sbjct:  313 ELIRNPNVMKKLQDEIRSTIRPHGSYIKEKDVENMKYLKAVIKEVFRVHPPLPLILPRLLSEDVKVKGYNIAAGTEVIINAWAIQRDPAIWGPDAEEFKPERHLDSTLDYHGKDLNFIPFGSGRRICPGINLALGLVEVTVANLVGRFDWRAEAGPNGDQPDLTEAFGLDVCRKFPLIAFP 493          
BLAST of FC923645 vs. ExPASy Swiss-Prot
Match: C75A6_CAMME (Flavonoid 3',5'-hydroxylase OS=Campanula medium GN=CYP75A6 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.209e-38
Identity = 80/191 (41.88%), Postives = 119/191 (62.30%), Query Frame = 2
Query:    5 EMMKNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRLHPSAPLIL-RECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHS---VDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPIPHC*GSSH 565
            EM+ + +++ +A  E+ +V  R  +++++ I  + Y + + KET R HPS PL L R   ++CE++GF+IP   R+IVN WA GRDP  W  P  F PERF+      +D +G +FE IPFGAGRRIC G   G ASVE  L  L++ F+WKLP+G+   +++M E+FG  +++K  L  I  P    SS+
Sbjct:  333 EMLNHRQILNRAHEEMDQVIGRNRRLEQSDIPNLPYFQAICKETFRKHPSTPLNLPRISTEACEVDGFHIPKNTRLIVNIWAIGRDPKVWENPLDFTPERFLSEKHAKIDPRGNHFELIPFGAGRRICAGARMGAASVEYILGTLVHSFDWKLPDGV--VEVNMEESFGIALQKKVPLSAIVTPRLPPSSY 521          
The following BLAST results are available for this feature:
BLAST of FC923645 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 472
Match NameE-valueIdentityDescription
C71BT_ARATH6.410e-4049.34Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=C... [more]
C98A1_SORBI1.428e-3945.78Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
F3PH_ARATH2.436e-3943.78Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana... [more]
C93A1_SOYBN4.155e-3942.08Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=... [more]
C71AE_ARATH5.426e-3944.81Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=C... [more]
C93A2_SOYBN7.087e-3941.53Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=... [more]
C80B1_ESCCA7.087e-3941.90(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (F... [more]
C75A2_SOLME7.087e-3944.02Flavonoid 3',5'-hydroxylase OS=Solanum melongena G... [more]
C71AC_ARATH7.087e-3944.75Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=C... [more]
C75A6_CAMME1.209e-3841.88Flavonoid 3',5'-hydroxylase OS=Campanula medium GN... [more]

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Properties
Property NameValue
Genbank descriptionC31707D10EF StrClemenN Citrus clementina cDNA clone C31707D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923645 ID=FC923645; Name=FC923645; organism=Citrus clementina; type=EST; length=689bp
GTATGAAATGATGAAAAATCCTAGAGTGATGAAGAAGGCACAAGCTGAGG
TGAGAGAAGTGTTTAATAGAAAAGGAAAGGTCGATGAAACGGGCATCAAT
GAAATGAAATACTTGAAGCTGGTTGTCAAAGAGACCCTGAGATTACATCC
TTCTGCACCTTTAATTCTAAGAGAATGTGGAGACAGTTGTGAGATTAACG
GATTCAACATTCCTGCAAAAGCCAGAGTCATTGTTAATTCATGGGCAACT
GGAAGAGATCCCATGTATTGGACTGAACCTGAGAGCTTTATTCCCGAGAG
ATTCATTGACCATTCTGTTGACTACAAGGGGACTAATTTTGAGTACATCC
CATTTGGTGCTGGTAGGAGGATATGCCCTGGAATGTCATTTGGTCTGGCC
AGCGTGGAGCTTACACTCGCGATGTTATTATACCATTTCGAATGGAAACT
ACCAAATGGAATGAAGCATGAGGATTTGGACATGACAGAGGCCTTTGGCG
CGACAGTAAGAAGAAAACAAGATCTGTGCATGATTCCTATTCCACACTGT
TAAGGAAGCTCACACTTGTAGTGTAGTCAGCAGAGCAGAGGATGATAGTA
GCAGGATCAATCAGTTACACATTGATGATGTGGCATGCCACGTCATGCCT
GGTGATTATGAAATTATGTGTACACGTGATTGATTAGTT
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