FC923647

Overview
NameFC923647
Unique NameFC923647
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: DKGB_ECO57 (2,5-diketo-D-gluconic acid reductase B OS=Escherichia coli O157:H7 GN=dkgB PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.811e-19
Identity = 60/190 (31.58%), Postives = 98/190 (51.58%), Query Frame = 2
Query:   86 MPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQD-LLKVARVTPAVNQVECHPGWHQEKLHEFCKSKGIHV 652
            +P  GLGT++ +  VV  ++  A+ + GYR ID A  Y NE  +G  +    E GV  R +L+IT+K+W  + + + +  ++  +LQ L+ DYVDL L+HWP          +P D  +  +    +A+      G  R IG+SNF++  ++  +  V     A NQ+E  P     K+  + K  GIH+
Sbjct:    3 IPAFGLGTFRLKDDVVISSVKTAL-ELGYRAIDTAQIYDNEAAVGLAIA---ESGV-PRHELYITTKIWIENLSKDKLIPSLKESLQKLRTDYVDLTLIHWP----------SPND--EVSVEEFMQALLEAKKEGLTREIGISNFTIPLMEKAIAAVGAENIATNQIELSPYLQNRKVVAWAKQHGIHI 175          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: DKGB_SALTY (2,5-diketo-D-gluconic acid reductase B OS=Salmonella typhimurium GN=dkgB PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.503e-18
Identity = 61/193 (31.61%), Postives = 105/193 (54.40%), Query Frame = 2
Query:   86 MPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDS---GKARAIGVSNFSVKKLQD-LLKVARVTPAVNQVECHPGWHQEKLHEFCKSKGIHV 652
            +P  GLGT++ +  VV  ++  A+ + GYR +D A  Y NE  +G   + + E GV  R +L+IT+K+W  + + + +  ++  +L+ L+ DYVDL L+HWP          +P D +     S  + M+AL ++   G  R IG+SNF++  ++  +  V     A NQ+E  P     K+ ++ K+ GIH+
Sbjct:    3 IPAFGLGTFRLKDDVVIASVKTAL-ELGYRAVDTAQIYDNEAAVG---QAIAESGV-PRNELYITTKIWIENLSKDKLIPSLKESLKKLRTDYVDLTLIHWP----------SPGDAV-----SVEEFMQALLEAKKQGLTREIGISNFTIPLMEKAIAAVGADNIATNQIELSPYLQNRKVVDWAKAHGIHI 175          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: AKCL1_HUMAN (Aldo-keto reductase family 1 member C-like protein 1 OS=Homo sapiens GN=AKR1CL1 PE=2 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.503e-18
Identity = 49/115 (42.61%), Postives = 69/115 (60.00%), Query Frame = 2
Query:   68 LNNGAKMPPIGLGTWQAQH---GVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTK 403
            LN+G  MP +G GT+   H      AEA  +AI   G+RHID AY Y NE+E+G  + +   DG +KRE+++ T KLW      E V  A++R+L+ L  DYVDL+++H P   K
Sbjct:   13 LNDGPFMPVLGFGTYAPDHTPKSQAAEATKVAI-DVGFRHIDSAYLYQNEEEVGQAIWEKIADGTVKREEIFYTIKLWATFFRAELVHPALERSLKKLGPDYVDLFIIHVPFAMK 126          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: Y1987_MYCUA (Uncharacterized oxidoreductase MUL_1987 OS=Mycobacterium ulcerans (strain Agy99) GN=MUL_1987 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.564e-18
Identity = 60/186 (32.26%), Postives = 93/186 (50.00%), Query Frame = 2
Query:   68 LNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVARVTPAVNQVECHPGWHQEKLHE 625
            LN+   MP +G+G           A++ A+ + G R ID A  YGNE  +G  L        I R +L++T+K+   DH      +A   +L  L +DYVDLYL+HWP      ++               +  +      G  R+IGVSNF+ + + +++ +  VTPAVNQVE HP  +Q++L +
Sbjct:   15 LNDENTMPVLGMGVAGLSDDETERAVSAAL-EIGCRLIDTAAAYGNEAAVGRALAA----SGIPRAELFVTTKVATADHGFTASREACKASLDRLGLDYVDLYLIHWPAPAVGKYVD-------------AFGGLIQARGEGFTRSIGVSNFTEEHVSNVIDLTFVTPAVNQVELHPLLNQDELRK 182          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: DKGB_SALTI (2,5-diketo-D-gluconic acid reductase B OS=Salmonella typhi GN=dkgB PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.564e-18
Identity = 61/193 (31.61%), Postives = 105/193 (54.40%), Query Frame = 2
Query:   86 MPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDS---GKARAIGVSNFSVKKLQD-LLKVARVTPAVNQVECHPGWHQEKLHEFCKSKGIHV 652
            +P  GLGT++ +  VV  ++  A+ + GYR +D A  Y NE  +G   + + E GV  R +L+IT+K+W  + + + +  ++  +L+ L+ DYVDL L+HWP          +P D +     S  + M+AL ++   G  R IG+SNF++  ++  +  V     A NQ+E  P     K+ ++ K+ GIH+
Sbjct:    3 IPAFGLGTFRLKDDVVIASVKTAL-ELGYRAVDTAQIYDNEAAVG---QAIAESGV-PRNELYITTKIWIENLSKDKLIPSLKESLKKLRTDYVDLTLIHWP----------SPGDAV-----SVEEFMQALLEAKKQGLTREIGISNFTIPLMEKAIAAVGADHIATNQIELSPYLQNRKVVDWAKAHGIHI 175          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: Y1744_MYCMM (Uncharacterized oxidoreductase MMAR_1744 OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=MMAR_1744 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.348e-18
Identity = 59/186 (31.72%), Postives = 93/186 (50.00%), Query Frame = 2
Query:   68 LNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVARVTPAVNQVECHPGWHQEKLHE 625
            LN+   MP +G+G           A++ A+ + G R ID A  YGNE  +G  +        I R +L++T+K+   DH      +A   +L  L +DYVDLYL+HWP      ++               +  +      G  R+IGVSNF+ + + +++ +  VTPAVNQVE HP  +Q++L +
Sbjct:   14 LNDENTMPVLGMGVAGLSDDETERAVSAAL-EIGCRLIDTAAAYGNEAAVGRAIAA----SGIPRAELFVTTKVATADHGFTASREACKASLDRLGLDYVDLYLIHWPAPAAGKYVD-------------AFGGLIQARGEGFTRSIGVSNFTEEHVSNVIDLTFVTPAVNQVELHPLLNQDELRK 181          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: Y1669_MYCLE (Uncharacterized oxidoreductase ML1669 OS=Mycobacterium leprae GN=ML1669 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.373e-18
Identity = 61/199 (30.65%), Postives = 92/199 (46.23%), Query Frame = 2
Query:   29 MDQIANDNVQYFELNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVARVTPAVNQVECHPGWHQEKLHE 625
            M      ++    LN+   MP +GLG  +        A+  A+ + G R ID A  YGNE  +   +        I R  L++T+KL   D        A + +L  L +DYVDLYL+HWP      ++               W  M      G AR+IGV NF+ + L  ++ +  VTPAVNQ+E HP  +Q+++ +
Sbjct:    2 MPSTPRTSIPSITLNDENTMPLLGLGVAELSEDETERAVLAAL-EIGCRLIDTAAAYGNEAAVSRAIAA----SGIPRAQLFVTTKLATPDQGFTKSQDACNASLDRLGMDYVDLYLIHWPAPPVGQYVD-------------AWGGMIQSRGEGHARSIGVCNFTEEHLSAIIDLTFVTPAVNQIELHPLLNQDEMRK 182          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: Y1669_MYCLB (Uncharacterized oxidoreductase MLBr01669 OS=Mycobacterium leprae (strain Br4923) GN=MLBr01669 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.373e-18
Identity = 61/199 (30.65%), Postives = 92/199 (46.23%), Query Frame = 2
Query:   29 MDQIANDNVQYFELNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVARVTPAVNQVECHPGWHQEKLHE 625
            M      ++    LN+   MP +GLG  +        A+  A+ + G R ID A  YGNE  +   +        I R  L++T+KL   D        A + +L  L +DYVDLYL+HWP      ++               W  M      G AR+IGV NF+ + L  ++ +  VTPAVNQ+E HP  +Q+++ +
Sbjct:    2 MPSTPRTSIPSITLNDENTMPLLGLGVAELSEDETERAVLAAL-EIGCRLIDTAAAYGNEAAVSRAIAA----SGIPRAQLFVTTKLATPDQGFTKSQDACNASLDRLGMDYVDLYLIHWPAPPVGQYVD-------------AWGGMIQSRGEGHARSIGVCNFTEEHLSAIIDLTFVTPAVNQIELHPLLNQDEMRK 182          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: DKGB_YERPE (2,5-diketo-D-gluconic acid reductase B OS=Yersinia pestis GN=dkgB PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.742e-18
Identity = 59/190 (31.05%), Postives = 98/190 (51.58%), Query Frame = 2
Query:   86 MPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKL-QDLLKVARVTPAVNQVECHPGWHQEKLHEFCKSKGIHV 652
            +P  GLGT++ Q  +V ++++ A+   GYR ID A  Y NE  +G  ++   E G I R++L+IT+K+W  + + + +  ++  ++Q L+ DYVDL L+HWP          +P D  +  +      +      G  R IG+SNF++  + Q +  V     A NQ+E  P      + +F K  GI V
Sbjct:    3 IPVFGLGTFRLQDQIVIDSVSQALT-LGYRAIDTAQIYENEAPVGQAIQ---ESG-INRDELFITTKIWIANLSKDKLIPSLRESIQKLKTDYVDLTLIHWP----------SPND--EVSVAEFMSELLKAKGLGLTRQIGISNFTIDLMKQAIAAVGAEEIATNQIELSPLLQNRNVVDFAKQNGIAV 175          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: GS69_BACSU (General stress protein 69 OS=Bacillus subtilis GN=yhdN PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.964e-11
Identity = 62/179 (34.64%), Postives = 88/179 (49.16%), Query Frame = 2
Query:   71 NNGAKMPPIGLGTWQ--------AQHGVVAEAIAIAIKQAGYRHIDCAYFYG---NEKEIGTELKKLFE-DGVI---KREDLWITSKLWCCDHAPED-VPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVA 559
            + G +   IGLGTW                E I  A+ Q G   ID A  YG   +E+ +G  +K+  + D VI   K    W  ++L+   HA    + + ++ +L+ LQ DY+DLY VHWP             D L P I  T + M+ LYD+GK RAIGVSNFS++++     VA
Sbjct:    8 DTGIEASRIGLGTWAIGGTMWGGTDEKTSIETIRAALDQ-GITLIDTAPAYGFGQSEEIVGKAIKEYGKRDQVILATKTALDWKNNQLF--RHANRARIVEEVENSLKRLQTDYIDLYQVHWP-------------DPLVP-IEETAEVMKELYDAGKIRAIGVSNFSIEQMDTFRAVA 169          
The following BLAST results are available for this feature:
BLAST of FC923647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
DKGB_ECO578.811e-1931.582,5-diketo-D-gluconic acid reductase B OS=Escheric... [more]
DKGB_SALTY1.503e-1831.612,5-diketo-D-gluconic acid reductase B OS=Salmonel... [more]
AKCL1_HUMAN1.503e-1842.61Aldo-keto reductase family 1 member C-like protein... [more]
Y1987_MYCUA2.564e-1832.26Uncharacterized oxidoreductase MUL_1987 OS=Mycobac... [more]
DKGB_SALTI2.564e-1831.612,5-diketo-D-gluconic acid reductase B OS=Salmonel... [more]
Y1744_MYCMM3.348e-1831.72Uncharacterized oxidoreductase MMAR_1744 OS=Mycoba... [more]
Y1669_MYCLE4.373e-1830.65Uncharacterized oxidoreductase ML1669 OS=Mycobacte... [more]
Y1669_MYCLB4.373e-1830.65Uncharacterized oxidoreductase MLBr01669 OS=Mycoba... [more]
DKGB_YERPE9.742e-1831.052,5-diketo-D-gluconic acid reductase B OS=Yersinia... [more]
GS69_BACSU3.964e-1134.64General stress protein 69 OS=Bacillus subtilis GN=... [more]

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Properties
Property NameValue
Genbank descriptionC31707D12EF StrClemenN Citrus clementina cDNA clone C31707D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923647 ID=FC923647; Name=FC923647; organism=Citrus clementina; type=EST; length=721bp
GGGTCATTTCACACACATAACTTGGGAAATGGACCAAATAGCAAACGATA
ACGTTCAATACTTCGAGTTGAACAATGGAGCCAAAATGCCGCCTATCGGA
TTAGGCACATGGCAGGCTCAACATGGTGTTGTTGCCGAAGCCATTGCTAT
TGCCATCAAGCAGGCTGGATACCGTCATATCGATTGTGCTTATTTCTATG
GCAATGAAAAGGAGATTGGTACCGAGCTGAAGAAACTGTTTGAAGATGGA
GTGATCAAGCGTGAGGATCTATGGATCACCTCCAAGCTCTGGTGTTGTGA
TCATGCACCAGAAGATGTACCAAAGGCAATGGACAGAACTTTGCAGGACT
TGCAGATTGATTACGTGGATTTGTACCTCGTGCACTGGCCAGTGCGAACG
AAGAAGGGATTTATAAGCCTCAATCCCGAAGACCTTCTTCAACCAGATAT
ACCAAGCACATGGAAAGCAATGGAGGCACTTTATGATTCTGGCAAGGCTC
GAGCTATCGGAGTTAGTAATTTCTCTGTAAAGAAGCTTCAGGATTTATTG
AAAGTTGCCCGTGTTACTCCTGCTGTTAACCAAGTGGAATGCCACCCTGG
ATGGCACCAGGAAAAGCTACATGAATTTTGCAAATCCAAAGGGATTCACG
TATCTGGATACTCCCCAATGGGTTCCCCAGGCTCACCATGGTTCAAGAGC
GATGTGCTGAAGCATCCGGTT
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