FC923647

Overview
NameFC923647
Unique NameFC923647
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: A1A1A_DANRE (Alcohol dehydrogenase [NADP+] A OS=Danio rerio GN=akr1a1a PE=2 SV=2)

HSP 1 Score: 178.718 bits (452), Expect = 2.720e-44
Identity = 90/201 (44.78%), Postives = 130/201 (64.68%), Query Frame = 2
Query:   68 LNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGV-IKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKG--FISLNPEDLLQPD---IPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVARVTPAVNQVECHPGWHQEKLHEFCKSKGIHV 652
            L+ G +MP +GLGTW++  G V +A+  A+   GYRHIDCA  Y NE+E+G  L +    G  ++R+D+++TSKLW   H P+DV +A  R+L DL++ Y+DLYL+HWP+   +G   I  +P+  +Q D      TW AME L D G A+AIG+SNF+ K++ D+L +A+  P VNQVECHP   Q +L   C S+ + V
Sbjct:    7 LSTGQRMPTVGLGTWKSAPGQVKQAVLAAL-DCGYRHIDCAAAYSNEREVGEALTERLGPGKSLRRDDIFVTSKLWNTKHHPDDVEEACRRSLSDLRLSYLDLYLIHWPMAFGRGDELIPRHPDGTIQYDDTHYRDTWAAMEKLVDQGLAKAIGLSNFNAKQIDDILSIAKHKPVVNQVECHPYLVQAELVSHCWSRNLTV 206          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: YBN4_SCHPO (Uncharacterized oxidoreductase C8E4.04 OS=Schizosaccharomyces pombe GN=SPBC8E4.04 PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 7.914e-44
Identity = 96/208 (46.15%), Postives = 129/208 (62.02%), Query Frame = 2
Query:   44 NDNVQYFELNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISL---NPEDLLQPDIP--STWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVARVTPAVNQVECHPGWHQEKLHEFCKSKGIHV 652
            N    YF L NG K+P IGLGTW++       A+  A+K AGYRHID A+ YGNEKEIG  ++   E GV  R D+W+TSKLWC  H    VP A+++TLQDL ++Y+D YL+HWP     G   L      +L+  D+P   TW+AME L ++GK R IG+SNF+ + L  +LK+A+V P ++Q+E HP   Q +  E  K   IHV
Sbjct:    9 NAREAYFTLPNGDKIPSIGLGTWRSGKDETKNAVCAALK-AGYRHIDTAHIYGNEKEIGEGIR---ESGV-PRTDIWVTSKLWCNAHRAGLVPLALEKTLQDLNLEYIDAYLIHWPFALLSGPEELPRNEKGELIYEDVPIEETWQAMEELLETGKVRYIGISNFNNEYLDRVLKIAKVKPTIHQMELHPYLPQTEYLEKHKKLQIHV 211          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: ALDR_ENCCU (Aldose reductase OS=Encephalitozoon cuniculi GN=ECU01_0970 PE=1 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.034e-43
Identity = 96/202 (47.52%), Postives = 126/202 (62.38%), Query Frame = 2
Query:   65 ELNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDH-APEDVPKAMDRTLQDLQIDYVDLYLVHWPVR---TKKGFISL--NPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVARVTPAVNQVECHPGWHQEKLHEFCKSKGIHV 652
            +LNNG ++P +GLGTW  +   V E         GYRHID A+ YGNEK IG  LKKLF++GV++R+DL+ITSKLW   H  PED    + R+L DLQ+DYVDLYL+HWPV       G +       ++ + D    WK MEAL D G A++IG+SNF     + +L   R+ PA  Q+E HP  +Q++L EF KSKGI V
Sbjct:    7 KLNNGKEIPTVGLGTWGMEDEAVLEGAIRNALSLGYRHIDTAFIYGNEKMIGNILKKLFDEGVVQRKDLFITSKLWNTFHGCPED---GLRRSLNDLQMDYVDLYLIHWPVTFDPAPDGTVESCGKKYNVGKFDAVGVWKKMEALVDLGLAKSIGISNFGKANTEKILGTCRICPAAIQIELHPYLNQKELVEFMKSKGIQV 205          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: CRO_RANTE (Rho crystallin OS=Rana temporaria PE=2 SV=3)

HSP 1 Score: 176.407 bits (446), Expect = 1.350e-43
Identity = 92/204 (45.10%), Postives = 131/204 (64.22%), Query Frame = 2
Query:   68 LNNGAKMPPIGLGTWQAQH---GVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQP------DIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKV--ARVTPAVNQVECHPGWHQEKLHEFCKSKGI 646
            LN+G  MP +GLGT+ + H    +  EA+ IAI   GYRHIDCA+  GNE  IG  ++    DG +KRED++ T KLWC   +PE V K ++R+L+D+ +DY+DL+L+HWPV  K    S +P D  +P      D+ +TW+A+EA  D+G  R++GVSNF+ ++L+ +L     +  P  NQVECH   +Q KLH +CKSK I
Sbjct:   11 LNDGNMMPILGLGTYASPHVPKSLAEEAVKIAI-DVGYRHIDCAFITGNEMHIGNGIRSKISDGTVKREDIFYTGKLWCTYFSPEMVRKGLERSLRDVGMDYLDLFLMHWPVSLKPSGAS-DPSDKDKPFIYDNVDLCATWEALEARKDAGLVRSLGVSNFNRRQLERILNKPGLKYKPVCNQVECHVYLNQNKLHSYCKSKDI 212          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: ALRC_DICDI (Aldose reductase C OS=Dictyostelium discoideum GN=alrC PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.763e-43
Identity = 102/238 (42.86%), Postives = 141/238 (59.24%), Query Frame = 2
Query:   44 NDNVQY----FELNNGAKMPPIGLGTWQAQH-GVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVR---------TKKGFISLNPEDLLQP-DIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVARVTPAVNQVECHPGWHQEKLHEFCKSKGIHVXXXXXXXXXXXXWFKSDVLK 712
            N+N  Y    F+LN+G ++P IGLGT+ +++ G V +AI  A+K  GYRHID A FYGNEK IG  LK++F++G IKRED++ TSKLW   H    V K   +T++DL I Y+DLYL+HWP+          T +     N   ++ P  I  TW+ ME L + G  ++IGVSNF+V+ L DLL  A++ P VNQVE HP   Q KL E+C    I +            +F + +LK
Sbjct:    7 NNNTNYNNNNFKLNDGNQIPSIGLGTYYSENPGEVGDAINNALKN-GYRHIDGAAFYGNEKVIGNSLKEIFKEGEIKREDIFYTSKLWNSCHNSNLVVKHCVKTIEDLGIGYLDLYLIHWPIAFENSNPLGLTIEPLRDQNGNPIIAPVSIRETWQEMEKLVELGLVKSIGVSNFNVQNLVDLLTYAKIKPVVNQVEIHPYLTQFKLQEYCDKYEIKLVAYSPLGQGKCDFFSNKILK 243          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: AK1BA_HUMAN (Aldo-keto reductase family 1 member B10 OS=Homo sapiens GN=AKR1B10 PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.303e-43
Identity = 97/228 (42.54%), Postives = 131/228 (57.46%), Query Frame = 2
Query:   59 YFELNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPD-----------IPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKV--ARVTPAVNQVECHPGWHQEKLHEFCKSKGIHVXXXXXXXXXXXXWFKSD 703
            + EL+  AKMP +GLGTW++  G V EA+ +AI  AGYRHIDCAY Y NE E+G  +++  ++  +KREDL+I SKLW        V KA ++TL+DL++ Y+D+YL+HWP   K G      +DL   D               W+AME L D G  +A+GVSNFS  +++ LL     +  P  NQVECHP   QEKL ++C SKGI V            W K +
Sbjct:    4 FVELSTKAKMPIVGLGTWKSPLGKVKEAVKVAI-DAGYRHIDCAYVYQNEHEVGEAIQEKIQEKAVKREDLFIVSKLWPTFFERPLVRKAFEKTLKDLKLSYLDVYLIHWPQGFKSG------DDLFPKDDKGNAIGGKATFLDAWEAMEELVDEGLVKALGVSNFSHFQIEKLLNKPGLKYKPVTNQVECHPYLTQEKLIQYCHSKGITVTAYSPLGSPDRPWAKPE 224          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: ALD1_MOUSE (Aldose reductase-related protein 1 OS=Mus musculus GN=Akr1b7 PE=2 SV=4)

HSP 1 Score: 173.711 bits (439), Expect = 8.750e-43
Identity = 94/206 (45.63%), Postives = 128/206 (62.14%), Query Frame = 2
Query:   59 YFELNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPED------LLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKV--ARVTPAVNQVECHPGWHQEKLHEFCKSKGIHV 652
            + EL+  AKMP +GLGTW++  G V EA+  AI  AGYRHIDCAY Y NE E+G  +++  ++  +KREDL+I SKLW        V KA   TL DL++DY+DLYLVHWP   + G  +L P+D      L +      W+AME L D G  +A+G+SNF+  +++ LL     +  P  NQ+E HP   QEKL ++C+SKGI V
Sbjct:    4 FVELSTKAKMPLVGLGTWKSSPGQVKEAVKAAI-DAGYRHIDCAYVYHNENEVGEAIQEKIKENAVKREDLFIVSKLWATFFEKSLVKKAFQNTLSDLKLDYLDLYLVHWPQGFQAG-NALLPKDNKGKVLLSKSTFLDAWEAMEELVDQGLVKALGISNFNHFQIERLLNKPGLKHKPVTNQIESHPYLTQEKLIQYCQSKGIAV 207          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: PE2R_RABIT (Prostaglandin-E(2) 9-reductase OS=Oryctolagus cuniculus GN=AKR1C5 PE=1 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.493e-42
Identity = 95/208 (45.67%), Postives = 132/208 (63.46%), Query Frame = 2
Query:   56 QYFELNNGAKMPPIGLGTWQAQH---GVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPED------LLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKV--ARVTPAVNQVECHPGWHQEKLHEFCKSKGI 646
            Q   L++G  +P +G GT+  +        EA  IAI  AG+RHID AYFY NEKE+G  ++    DG +KRED++ TSKLWC  H PE V  +++ +L++LQ+DYVDLY++H+P   K G + + P D          DI +TW+AME   D+G A++IGVSNF+ ++L+ +L     +  P  NQVECHP  +Q KL EFCKSKGI
Sbjct:    6 QRVALSDGHFIPVLGFGTYAPEEVPKSKAMEATKIAI-DAGFRHIDSAYFYKNEKEVGLAIRSKIADGTVKREDIFYTSKLWCTFHRPELVRPSLEDSLKNLQLDYVDLYIIHFPTALKPG-VEIIPTDEHGKAIFDTVDICATWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYLNQGKLLEFCKSKGI 211          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: XYL1_PICST (NAD(P)H-dependent D-xylose reductase OS=Pichia stipitis GN=XYL1 PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.546e-42
Identity = 96/207 (46.38%), Postives = 129/207 (62.32%), Query Frame = 2
Query:   65 ELNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTK---------KGFISLNPEDLLQPDIP--STWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVARVTPAVNQVECHPGWHQEKLHEFCKSKGIHV 652
            +LN+G  MP +G G W+      +E I  AIK  GYR  D A  Y NEK +G  +KK  ++G++KREDL++TSKLW   H P++V KA++RTL DLQ+DYVDL+L+H+PV  K          GF     ++    D+P   TWKA+E L  +GK R+IGVSNF    L DLL+ A + P+V QVE HP   Q +L EF +S+GI V
Sbjct:    5 KLNSGYDMPAVGFGCWKVDVDTCSEQIYRAIK-TGYRLFDGAEDYANEKLVGAGVKKAIDEGIVKREDLFLTSKLWNNYHHPDNVEKALNRTLSDLQVDYVDLFLIHFPVTFKFVPLEEKYPPGFYCGKGDNFDYEDVPILETWKALEKLVKAGKIRSIGVSNFPGALLLDLLRGATIKPSVLQVEHHPYLQQPRLIEFAQSRGIAV 210          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: AK1C1_MACFU (Aldo-keto reductase family 1 member C1 homolog OS=Macaca fuscata fuscata GN=AKR1C1 PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.546e-42
Identity = 96/208 (46.15%), Postives = 135/208 (64.90%), Query Frame = 2
Query:   56 QYFELNNGAKMPPIGLGTW---QAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPED----LL--QPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKV--ARVTPAVNQVECHPGWHQEKLHEFCKSKGI 646
            Q  +LN+G  MP +G GT+   +       EA  +AI +AG+RHID A+ Y NE+ +G  ++    DG +KRED++ TSKLWC  H PE V  A++R+L++LQ+DYVDLYL+H+PV  K G   L P+D    LL    D+ +TW+AME   D+G A++IGVSNF+ ++L+ +L     +  P  NQVECHP  +Q KL +FCKSK I
Sbjct:    6 QCVKLNDGHFMPVLGFGTYAPAEVPKNKAIEATKLAI-EAGFRHIDSAHLYNNEEYVGLAIRSKIADGTVKREDIFYTSKLWCNSHRPEFVRPALERSLKNLQLDYVDLYLIHFPVSLKPG-EELIPKDENGKLLFDTVDLCATWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYLNQRKLLDFCKSKDI 211          
The following BLAST results are available for this feature:
BLAST of FC923647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
A1A1A_DANRE2.720e-4444.78Alcohol dehydrogenase [NADP+] A OS=Danio rerio GN=... [more]
YBN4_SCHPO7.914e-4446.15Uncharacterized oxidoreductase C8E4.04 OS=Schizosa... [more]
ALDR_ENCCU1.034e-4347.52Aldose reductase OS=Encephalitozoon cuniculi GN=EC... [more]
CRO_RANTE1.350e-4345.10Rho crystallin OS=Rana temporaria PE=2 SV=3[more]
ALRC_DICDI1.763e-4342.86Aldose reductase C OS=Dictyostelium discoideum GN=... [more]
AK1BA_HUMAN2.303e-4342.54Aldo-keto reductase family 1 member B10 OS=Homo sa... [more]
ALD1_MOUSE8.750e-4345.63Aldose reductase-related protein 1 OS=Mus musculus... [more]
PE2R_RABIT1.493e-4245.67Prostaglandin-E(2) 9-reductase OS=Oryctolagus cuni... [more]
XYL1_PICST2.546e-4246.38NAD(P)H-dependent D-xylose reductase OS=Pichia sti... [more]
AK1C1_MACFU2.546e-4246.15Aldo-keto reductase family 1 member C1 homolog OS=... [more]

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Properties
Property NameValue
Genbank descriptionC31707D12EF StrClemenN Citrus clementina cDNA clone C31707D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923647 ID=FC923647; Name=FC923647; organism=Citrus clementina; type=EST; length=721bp
GGGTCATTTCACACACATAACTTGGGAAATGGACCAAATAGCAAACGATA
ACGTTCAATACTTCGAGTTGAACAATGGAGCCAAAATGCCGCCTATCGGA
TTAGGCACATGGCAGGCTCAACATGGTGTTGTTGCCGAAGCCATTGCTAT
TGCCATCAAGCAGGCTGGATACCGTCATATCGATTGTGCTTATTTCTATG
GCAATGAAAAGGAGATTGGTACCGAGCTGAAGAAACTGTTTGAAGATGGA
GTGATCAAGCGTGAGGATCTATGGATCACCTCCAAGCTCTGGTGTTGTGA
TCATGCACCAGAAGATGTACCAAAGGCAATGGACAGAACTTTGCAGGACT
TGCAGATTGATTACGTGGATTTGTACCTCGTGCACTGGCCAGTGCGAACG
AAGAAGGGATTTATAAGCCTCAATCCCGAAGACCTTCTTCAACCAGATAT
ACCAAGCACATGGAAAGCAATGGAGGCACTTTATGATTCTGGCAAGGCTC
GAGCTATCGGAGTTAGTAATTTCTCTGTAAAGAAGCTTCAGGATTTATTG
AAAGTTGCCCGTGTTACTCCTGCTGTTAACCAAGTGGAATGCCACCCTGG
ATGGCACCAGGAAAAGCTACATGAATTTTGCAAATCCAAAGGGATTCACG
TATCTGGATACTCCCCAATGGGTTCCCCAGGCTCACCATGGTTCAAGAGC
GATGTGCTGAAGCATCCGGTT
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