FC923647

Overview
NameFC923647
Unique NameFC923647
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: AK1C1_MACFA (Aldo-keto reductase family 1 member C1 homolog OS=Macaca fascicularis GN=AKR1C1 PE=1 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.546e-42
Identity = 96/208 (46.15%), Postives = 135/208 (64.90%), Query Frame = 2
Query:   56 QYFELNNGAKMPPIGLGTW---QAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPED----LL--QPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKV--ARVTPAVNQVECHPGWHQEKLHEFCKSKGI 646
            Q  +LN+G  MP +G GT+   +       EA  +AI +AG+RHID A+ Y NE+ +G  ++    DG +KRED++ TSKLWC  H PE V  A++R+L++LQ+DYVDLYL+H+PV  K G   L P+D    LL    D+ +TW+AME   D+G A++IGVSNF+ ++L+ +L     +  P  NQVECHP  +Q KL +FCKSK I
Sbjct:    6 QCVKLNDGHFMPVLGFGTYAPAEVPKNKALEATKLAI-EAGFRHIDSAHLYNNEEYVGLAIRSKIADGTVKREDIFYTSKLWCNSHRPEFVRPALERSLKNLQLDYVDLYLIHFPVSLKPG-EELIPKDENGKLLFDTVDLCATWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYLNQRKLLDFCKSKDI 211          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: AK1A1_CRIGR (Alcohol dehydrogenase [NADP+] (Fragment) OS=Cricetulus griseus GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.546e-42
Identity = 96/218 (44.04%), Postives = 131/218 (60.09%), Query Frame = 2
Query:   95 IGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDG-VIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGF--ISLNPEDLLQPD---IPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVARVTPAVNQVECHPGWHQEKLHEFCKSKGIHVXXXXXXXXXXXXWFKSD---VLKHPV 721
            IGLGTW++  G V  AI  A+   GYRHIDCA  YGNE EIG  LK+    G  + RE+L++TSKLW   H PEDV  A+ +TL DLQ++Y+DLYL+HWP   ++G      N +  ++ D      TWKA+EAL   G  +A+G+SNF+ +++ D+L VA V PAV QVECHP   Q +L   C+++G+ V            W   D   +L+ PV
Sbjct:    2 IGLGTWKSNPGQVKAAIKYALS-VGYRHIDCAAVYGNEIEIGEALKENVGPGKAVPREELFVTSKLWNTKHHPEDVEAALRKTLADLQLEYLDLYLMHWPYAFERGDNPFPKNDDGTIRYDSTHYKETWKALEALVAKGLVKALGLSNFNSRQIDDILSVASVRPAVLQVECHPYLAQNELIAHCQARGLEVTAYSPLGSSDRAWRHPDEPVLLEEPV 218          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: ALD2_CRIGR (Aldose reductase-related protein 2 OS=Cricetulus griseus GN=AKR1B8 PE=1 SV=3)

HSP 1 Score: 171.785 bits (434), Expect = 3.325e-42
Identity = 96/223 (43.05%), Postives = 133/223 (59.64%), Query Frame = 2
Query:   59 YFELNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPED----LLQPDIP--STWKAMEALYDSGKARAIGVSNFSVKKLQDLLKV--ARVTPAVNQVECHPGWHQEKLHEFCKSKGIHVXXXXXXXXXXXXWFKSD 703
            + EL+  AKMP +GLGTWQ+  G V EA+ +AI  AGYRHIDCAY Y NE E+G  +++  ++  ++REDL+I SKLW      + + +A  +TL DL++DY+DLYL+HWP   + G   L P+D    +L   I     W+ ME L D G  +A+GVSNF+  +++ +L     +  P  NQVECHP   QEKL E+C SKGI V            W K +
Sbjct:    4 FVELSTKAKMPIVGLGTWQSPPGQVKEAVKVAI-DAGYRHIDCAYAYYNEHEVGEAIQEKIKEKAVRREDLFIVSKLWPTCFERKLLKEAFQKTLTDLKLDYLDLYLIHWPQGLQPG-KELFPKDDQGNVLTSKITFLDAWEVMEELVDEGLVKALGVSNFNHFQIERILNKPGLKHKPVTNQVECHPYLTQEKLIEYCHSKGITVTAYSPLGSPNRPWAKPE 224          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: XYL1_CANSH (NAD(P)H-dependent D-xylose reductase OS=Candida shehatae GN=XYL1 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.343e-42
Identity = 91/208 (43.75%), Postives = 132/208 (63.46%), Query Frame = 2
Query:   62 FELNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTK---------KGFISLNPEDLLQPDIP--STWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVARVTPAVNQVECHPGWHQEKLHEFCKSKGIHV 652
            F+LNNG +MP IG G W+      A+ +  AIK AGYR  D A  YGNE+E+G  +K+  ++G++ RE++++TSKLW   H P++V  A+++TL+DL++DYVDL+L+H+P+  K          GF   + ++ +  D+P   TWKA+E L  +GK R+IGVSNF    L DL + A + PAV QVE HP   Q KL E+ +  GI V
Sbjct:    9 FKLNNGLEMPSIGFGCWKLDKSTAADQVYNAIK-AGYRLFDGAEDYGNEQEVGEGVKRAIDEGIVTREEIFLTSKLWNNYHDPKNVETALNKTLKDLKVDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGDNFVYEDVPILETWKALEKLVKAGKIRSIGVSNFPGALLLDLFRGATIKPAVLQVEHHPYLQQPKLIEYAQKVGITV 215          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: CRO_RANCA (Rho crystallin OS=Rana catesbeiana PE=1 SV=2)

HSP 1 Score: 171.014 bits (432), Expect = 5.672e-42
Identity = 90/204 (44.12%), Postives = 129/204 (63.24%), Query Frame = 2
Query:   68 LNNGAKMPPIGLGTWQAQH---GVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQP------DIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKV--ARVTPAVNQVECHPGWHQEKLHEFCKSKGI 646
            LN+G  MP +GLGT+ A      +  EA+  AI   GYRHIDCA+  GNE  IG  ++    DG +KRED++ T KLWC   +P+ V K ++R+L+D+ +DY+DL+L+HWPV  K    S +P D  +P      D+ +TW+A+EA  D+G  R++GVSNF+ ++L+ +L     +  P  NQVECH   +Q KLH +CKSK I
Sbjct:   11 LNDGNMMPILGLGTYAAPDVPKSLAEEAVKTAI-DVGYRHIDCAFITGNEMHIGNGIRSKISDGTVKREDIFYTGKLWCTYFSPDMVRKGLERSLRDVGMDYLDLFLMHWPVSLKPSGAS-DPSDKDKPFIYDNVDLCATWEALEARKDAGLVRSLGVSNFNRRQLERILNKPGLKYKPVCNQVECHVYLNQNKLHSYCKSKDI 212          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: AK1C1_HUMAN (Aldo-keto reductase family 1 member C1 OS=Homo sapiens GN=AKR1C1 PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.672e-42
Identity = 92/208 (44.23%), Postives = 135/208 (64.90%), Query Frame = 2
Query:   56 QYFELNNGAKMPPIGLGTW---QAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPED------LLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKV--ARVTPAVNQVECHPGWHQEKLHEFCKSKGI 646
            Q  +LN+G  MP +G GT+   +       EA  +AI +AG+RHID A+ Y NE+++G  ++    DG +KRED++ TSKLWC  H PE V  A++R+L++LQ+DYVDLYL+H+PV  K G   + P+D          D+ +TW+A+E   D+G A++IGVSNF+ ++L+ +L     +  P  NQVECHP ++Q KL +FCKSK I
Sbjct:    6 QCVKLNDGHFMPVLGFGTYAPAEVPKSKALEATKLAI-EAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWCNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVKPG-EEVIPKDENGKILFDTVDLCATWEAVEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNQRKLLDFCKSKDI 211          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: XYL1_KLULA (NAD(P)H-dependent D-xylose reductase OS=Kluyveromyces lactis GN=XYL1 PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 7.407e-42
Identity = 90/210 (42.86%), Postives = 133/210 (63.33%), Query Frame = 2
Query:   68 LNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTK---------KGFISLNPED----LLQPDIP--STWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVARVTPAVNQVECHPGWHQEKLHEFCKSKGIHV 652
            LNNG KMP +GLG W+  + V A+ I  AIK  GYR  D A  Y NEKE+G  + +  ++G++KREDL + SKLW   H P++VP+A++RTL DLQ+DYVD++ +H+P+  K          GF +   ++    + +  +P   TW+A+E L D GK +++G+SNFS   +QDLL+ AR+ P   Q+E HP   QE+L ++ K+ GI V
Sbjct:   10 LNNGEKMPLVGLGCWKMPNDVCADQIYEAIK-IGYRLFDGAQDYANEKEVGQGVNRAIKEGLVKREDLVVVSKLWNSFHHPDNVPRALERTLSDLQLDYVDIFYIHFPLAFKPVPFDEKYPPGFYTGKEDEAKGHIEEEQVPLLDTWRALEKLVDQGKIKSLGISNFSGALIQDLLRGARIKPVALQIEHHPYLTQERLIKYVKNAGIQV 218          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: AK1C1_PONAB (Aldo-keto reductase family 1 member C1 homolog OS=Pongo abelii GN=AKR1C1 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 7.407e-42
Identity = 93/208 (44.71%), Postives = 134/208 (64.42%), Query Frame = 2
Query:   56 QYFELNNGAKMPPIGLGTW---QAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPED------LLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKV--ARVTPAVNQVECHPGWHQEKLHEFCKSKGI 646
            Q  +LN+   MP +G GT+   +       EA  +AI +AG+RHID A+ Y NE+++G  ++    DG +KRED++ TSKLWC  H PE V  A++R+L++LQ+DYVDLYLVH+PV  K G   + P+D          D+ +TW+AME   D+G A++IGVSNF+ ++L+ +L     +  P  NQVECHP ++Q KL +FCKSK I
Sbjct:    6 QCVKLNDSHFMPVLGFGTYAPPEVPKSKALEATKLAI-EAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWCNSHRPELVRPALERSLKNLQLDYVDLYLVHFPVSVKPG-EEVIPKDENGKILFDTVDLCATWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNQRKLLDFCKSKDI 211          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: A1A1B_DANRE (Alcohol dehydrogenase [NADP+] B OS=Danio rerio GN=akr1a1b PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 7.407e-42
Identity = 89/199 (44.72%), Postives = 129/199 (64.82%), Query Frame = 2
Query:   68 LNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLF-EDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKG---FISLNPEDLLQPDI--PSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVARVTPAVNQVECHPGWHQEKLHEFCKSKGI 646
            L+ G KMP +GLGTW+++ G+V +A+  A+ ++GYRHIDCA  Y NE EIG   ++    D  I+RED+++TSKLW   H P+DV  ++ +TL+DL+++Y+DLYL+HWP   ++G   F       LL  DI    TW AME L   G  RAIG+SNF+ +++ D+L VA + P V QVE HP   Q +L   C+ +G+
Sbjct:    7 LSTGRKMPLLGLGTWKSEPGLVKQAVIWAL-ESGYRHIDCAPIYANEPEIGEAFQETMGPDKGIRREDVFVTSKLWNTKHHPDDVEPSLLKTLKDLKLEYLDLYLIHWPYAFQRGDTPFPRKEDGTLLYDDIDYKLTWAAMEKLVGKGLVRAIGLSNFNSRQIDDILSVASIKPTVLQVESHPYLAQVELLSHCRDRGL 204          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: ALDX_SPOSA (Aldehyde reductase 1 OS=Sporobolomyces salmonicolor GN=ARI PE=1 SV=3)

HSP 1 Score: 170.244 bits (430), Expect = 9.674e-42
Identity = 90/205 (43.90%), Postives = 127/205 (61.95%), Query Frame = 2
Query:   68 LNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVR-------TKKGFISLNPEDL---LQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVARVTPAVNQVECHPGWHQEKLHEFCKSKGIHV 652
            LN GA +  +G GTWQA  G V + + +AI + GYRH+D A  Y N+ E+G  +K    +  +KREDL+ITSKLW   H PE V  A+D TL++L ++Y+DLYL+HWPV        T+  F   N +++   L+  +  TWKAM  L D+GK +AIGVSNF  K +  +++   VTP+VNQ+E HP   Q +L    K+K IH+
Sbjct:    7 LNTGASLELVGYGTWQAAPGEVGQGVKVAI-ETGYRHLDLAKVYSNQPEVGAAIK----EAGVKREDLFITSKLWNNSHRPEQVEPALDDTLKELGLEYLDLYLIHWPVAFPPEGDITQNLFPKANDKEVKLDLEVSLVDTWKAMVKLLDTGKVKAIGVSNFDAKMVDAIIEATGVTPSVNQIERHPLLLQPELIAHHKAKNIHI 206          
The following BLAST results are available for this feature:
BLAST of FC923647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
AK1C1_MACFA2.546e-4246.15Aldo-keto reductase family 1 member C1 homolog OS=... [more]
AK1A1_CRIGR2.546e-4244.04Alcohol dehydrogenase [NADP+] (Fragment) OS=Cricet... [more]
ALD2_CRIGR3.325e-4243.05Aldose reductase-related protein 2 OS=Cricetulus g... [more]
XYL1_CANSH4.343e-4243.75NAD(P)H-dependent D-xylose reductase OS=Candida sh... [more]
CRO_RANCA5.672e-4244.12Rho crystallin OS=Rana catesbeiana PE=1 SV=2[more]
AK1C1_HUMAN5.672e-4244.23Aldo-keto reductase family 1 member C1 OS=Homo sap... [more]
XYL1_KLULA7.407e-4242.86NAD(P)H-dependent D-xylose reductase OS=Kluyveromy... [more]
AK1C1_PONAB7.407e-4244.71Aldo-keto reductase family 1 member C1 homolog OS=... [more]
A1A1B_DANRE7.407e-4244.72Alcohol dehydrogenase [NADP+] B OS=Danio rerio GN=... [more]
ALDX_SPOSA9.674e-4243.90Aldehyde reductase 1 OS=Sporobolomyces salmonicolo... [more]

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Properties
Property NameValue
Genbank descriptionC31707D12EF StrClemenN Citrus clementina cDNA clone C31707D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923647 ID=FC923647; Name=FC923647; organism=Citrus clementina; type=EST; length=721bp
GGGTCATTTCACACACATAACTTGGGAAATGGACCAAATAGCAAACGATA
ACGTTCAATACTTCGAGTTGAACAATGGAGCCAAAATGCCGCCTATCGGA
TTAGGCACATGGCAGGCTCAACATGGTGTTGTTGCCGAAGCCATTGCTAT
TGCCATCAAGCAGGCTGGATACCGTCATATCGATTGTGCTTATTTCTATG
GCAATGAAAAGGAGATTGGTACCGAGCTGAAGAAACTGTTTGAAGATGGA
GTGATCAAGCGTGAGGATCTATGGATCACCTCCAAGCTCTGGTGTTGTGA
TCATGCACCAGAAGATGTACCAAAGGCAATGGACAGAACTTTGCAGGACT
TGCAGATTGATTACGTGGATTTGTACCTCGTGCACTGGCCAGTGCGAACG
AAGAAGGGATTTATAAGCCTCAATCCCGAAGACCTTCTTCAACCAGATAT
ACCAAGCACATGGAAAGCAATGGAGGCACTTTATGATTCTGGCAAGGCTC
GAGCTATCGGAGTTAGTAATTTCTCTGTAAAGAAGCTTCAGGATTTATTG
AAAGTTGCCCGTGTTACTCCTGCTGTTAACCAAGTGGAATGCCACCCTGG
ATGGCACCAGGAAAAGCTACATGAATTTTGCAAATCCAAAGGGATTCACG
TATCTGGATACTCCCCAATGGGTTCCCCAGGCTCACCATGGTTCAAGAGC
GATGTGCTGAAGCATCCGGTT
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