FC923647

Overview
NameFC923647
Unique NameFC923647
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: XYL2_CANTR (NADPH-dependent D-xylose reductase II,III OS=Candida tropicalis GN=xyrB PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.065e-40
Identity = 86/207 (41.55%), Postives = 131/207 (63.29%), Query Frame = 2
Query:   65 ELNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTK---------KGFISLNPEDLLQPDIP--STWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVARVTPAVNQVECHPGWHQEKLHEFCKSKGIHV 652
            +LN+G +MP +G G W+  +   A+ I  AIK  GYR  D A  YGNEKE+G  + +  ++G++KRE+L+ITSKLW   H P++V  A+++TL DL +DYVDL+L+H+P+  K          GF   + ++    D+P   TWKA+E L ++GK ++IG+SNF+   + DL++ A + PAV Q+E HP   Q KL E+ +  GI +
Sbjct:   11 KLNSGYEMPLVGFGCWKVNNETAADQIYNAIK-TGYRLFDGAEDYGNEKEVGEGINRAIKEGLVKREELFITSKLWNNFHDPKNVETALNKTLSDLNLDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGDNFHYEDVPLLDTWKALEKLVEAGKIKSIGISNFTGALIYDLIRGATIKPAVLQIEHHPYLQQPKLIEYVQKAGIAI 216          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: AK1CO_HORSE (Aldo-keto reductase family 1 member C23-like protein OS=Equus caballus GN=PGFS PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.065e-40
Identity = 91/205 (44.39%), Postives = 129/205 (62.93%), Query Frame = 2
Query:   65 ELNNGAKMPPIGLGTWQAQH---GVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPED------LLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKV--ARVTPAVNQVECHPGWHQEKLHEFCKSKGI 646
            +LN+G  +P +G GT+  +        E   +AI  AG+RHID AY Y NEKE+G  ++   EDG +KRED++ TSKLW     PE V  A++++L +LQ+DYVDLY++H+P+  K G   L PED          D+ +TW+AME   D+G A++IGVSNF+ ++L+ +L     +  P  NQVECHP  +Q KL +FCKSK I
Sbjct:    9 KLNDGHVIPVLGFGTYAPEEVPKSRTVEVTKLAI-DAGFRHIDSAYSYNNEKEVGQAIRSKIEDGTVKREDIFYTSKLWLTFLRPELVRPALEKSLTNLQLDYVDLYIIHFPIALKPG-EELFPEDEHGKLIFDTVDLCATWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYLNQSKLLDFCKSKDI 211          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: DHB5_MOUSE (Estradiol 17 beta-dehydrogenase 5 OS=Mus musculus GN=Akr1c6 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.308e-40
Identity = 94/208 (45.19%), Postives = 131/208 (62.98%), Query Frame = 2
Query:   56 QYFELNNGAKMPPIGLGTWQAQH---GVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPED----LLQP--DIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKV--ARVTPAVNQVECHPGWHQEKLHEFCKSKGI 646
            Q   L++G  +P +G GT+  Q        EA  IAI  AG+RHID A  Y NEKE+G  ++    DG +KRED++ TSK+WC  H PE V   ++++L+ LQ+DYVDLYL+H+P+  K G   L P+D    L+    DI  TW+AME   D+G A++IGVSNF+ ++L+ +LK    +  P  NQVECHP  +Q KL +FC+SK I
Sbjct:    6 QTVRLSDGHFIPILGFGTYAPQEVPKSKATEATKIAI-DAGFRHIDSASMYQNEKEVGLAIRSKIADGTVKREDIFYTSKVWCTFHRPELVRVCLEQSLKQLQLDYVDLYLIHFPMAMKPGENYL-PKDENGKLIYDAVDICDTWEAMEKCKDAGLAKSIGVSNFNRRQLEKILKKPGLKYKPVCNQVECHPYLNQGKLLDFCRSKDI 211          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: AKC1H_RAT (Aldo-keto reductase family 1 member C18 OS=Rattus norvegicus GN=Akr1c18 PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.545e-39
Identity = 90/212 (42.45%), Postives = 128/212 (60.38%), Query Frame = 2
Query:   44 NDNVQYFELNNGAKMPPIGLGTWQAQHGV---VAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPED------LLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKV--ARVTPAVNQVECHPGWHQEKLHEFCKSKGI 646
            N  +Q  ELN+G  +P +G GT+  +  +     E+  IAI   G+RHIDC++ Y NE+EIG  +    EDG +KRED++ TSKLW   H PE V  +++ +L+ L +DYVDLYL+H+PV  K G   L P+D      L   D+  TW+AME   D+G A++IGVSNF+ ++L+ +L     +  P  NQVECH   +Q KL  +CK   I
Sbjct:    2 NSKIQKMELNDGHSIPVLGFGTYATEENLRKKSMESTKIAI-DVGFRHIDCSHLYQNEEEIGQAIVSKIEDGTVKREDIFYTSKLWSTSHRPELVRPSLENSLRKLNLDYVDLYLIHFPVSLKPG-DELLPQDEHGNLILDTVDLCDTWEAMEKCKDAGLAKSIGVSNFNRRQLEKILNKPGLKHRPVCNQVECHLYLNQSKLLAYCKMNDI 211          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: AK1C4_MACFA (Aldo-keto reductase family 1 member C4 OS=Macaca fascicularis GN=AKR1C4 PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.017e-39
Identity = 90/208 (43.27%), Postives = 129/208 (62.02%), Query Frame = 2
Query:   56 QYFELNNGAKMPPIGLGTW---QAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPED------LLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLK--VARVTPAVNQVECHPGWHQEKLHEFCKSKGI 646
            Q   LN+G  MP +G GT+   +     V E   +AI +AG+RHID AY Y NE+++G  ++    DG +KRED++ TSKLWC    P+ V  A++ +L+ LQ+DYVDLYL+H+P+  K G   L P+D          D+ + W+AME   D+G A++IGVSNF+ ++L+ +L     +  P  NQVECHP  +Q KL +FCKSK I
Sbjct:    6 QRVALNDGHFMPVLGFGTYAPPEVPRNRVVEVTKLAI-EAGFRHIDSAYLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWCTFFRPQLVQPALESSLKKLQLDYVDLYLIHFPMALKPGETPL-PKDENGKVMFDTVDLCAIWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNNPGLKYKPVCNQVECHPYLNQSKLLDFCKSKDI 211          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: AKCL2_MACFA (1,5-anhydro-D-fructose reductase OS=Macaca fascicularis GN=AKR1E2 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.635e-39
Identity = 87/215 (40.47%), Postives = 125/215 (58.14%), Query Frame = 2
Query:   86 MPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGF---------------------ISLNPEDLLQP---DIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKV--ARVTPAVNQVECHPGWHQEKLHEFCKSKGIHV 652
            +P +GL  W+A  G V EA+ +AI  AGYRH +CAYFY NEKE+G  ++   ++G ++REDL+I SKLWC  H    V  A  R+L+ L+++Y+DLYL+HWP+  K                        + L+  D++ P   D   TW+AME L  +G  + IGVSNF+ ++L+ LL     R  P  NQ+ECHP   Q+ L  FC+S+G+ V
Sbjct:    4 IPAVGLSCWKASPGKVTEAVKVAI-DAGYRHFNCAYFYHNEKEVGAGIRYKIKEGAVRREDLFIASKLWCTCHKKSLVKTACRRSLKALKLNYLDLYLIHWPMGFKPPHPEWIMSCSELSFCLSHPGVHDLPLDESDMVIPGDTDFLDTWEAMEDLVITGLVKNIGVSNFNHEQLERLLNKPGLRFKPVTNQIECHPYLTQKNLISFCQSRGVSV 217          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: ALRB_DICDI (Aldose reductase B OS=Dictyostelium discoideum GN=alrB PE=3 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 4.494e-39
Identity = 94/207 (45.41%), Postives = 127/207 (61.35%), Query Frame = 2
Query:   62 FELNNGAK-MPPIGLGTWQ-AQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFIS------LNPED----LLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVARVTPAVNQVECHPGWHQEKLHEFCKSKGI 646
            F+LN+    +P IGLGT+  A+ G V +A+ +A+K +GYRHID A  Y NEKEIG  LK++F +G IKRED++  SKLW   H    V K  ++TL+DL ++Y+DLYL+HWP+  +    S      L   D    L    I  TW+ ME L + G  ++IGVSNF+V+ L DLL  A++ PA+NQVE HP   Q  L  FC   GI
Sbjct:    8 FKLNDDIHHIPMIGLGTYNGAKVGEVGDAVKVALK-SGYRHIDGAAIYMNEKEIGHALKEVFAEGEIKREDIFYVSKLWNSCHHASLVRKHCEKTLEDLGLEYLDLYLIHWPIAFENADPSGTTTQPLRDSDGEPVLAAVSIRETWQEMEKLVEYGLVKSIGVSNFNVQNLVDLLTYAKIKPAINQVEVHPYLSQPNLKYFCDRYGI 213          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: AK1C4_MACFU (Aldo-keto reductase family 1 member C4 OS=Macaca fuscata fuscata GN=AKR1C4 PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.869e-39
Identity = 89/208 (42.79%), Postives = 129/208 (62.02%), Query Frame = 2
Query:   56 QYFELNNGAKMPPIGLGTW---QAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPED------LLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLK--VARVTPAVNQVECHPGWHQEKLHEFCKSKGI 646
            Q   LN+G  MP +G G++   +     V E   +AI +AG+RHID AY Y NE+++G  ++    DG +KRED++ TSKLWC    P+ V  A++ +L+ LQ+DYVDLYL+H+P+  K G   L P+D          D+ + W+AME   D+G A++IGVSNF+ ++L+ +L     +  P  NQVECHP  +Q KL +FCKSK I
Sbjct:    6 QRVALNDGHFMPVLGFGSYAPPEVPRNRVVEVTKLAI-EAGFRHIDSAYLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWCTFFRPQLVQPALESSLKKLQLDYVDLYLIHFPMALKPGETPL-PKDENGKVMFDTVDLCAIWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNNPGLKYKPVCNQVECHPYLNQSKLLDFCKSKDI 211          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: PGFS1_BOVIN (Prostaglandin F synthase 1 OS=Bos taurus PE=1 SV=3)

HSP 1 Score: 159.844 bits (403), Expect = 1.308e-38
Identity = 85/206 (41.26%), Postives = 127/206 (61.65%), Query Frame = 2
Query:   56 QYFELNNGAKMPPIGLGTWQAQHGVVAEAIAIA--IKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKG--FISLNPEDLL---QPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKV--ARVTPAVNQVECHPGWHQEKLHEFCKSKGI 646
            Q  +LN+G  +P +G GT+  +    +EA+       + G+RH+D A+ Y NE+++G  ++    DG +KRED++ TSKLWC    PE V  A++++LQ+LQ+DYVDLY++H PV  K G  F+  +    L     D+  TW+A+E   D+G  ++IGVSNF+ K+L+ +L     +  P  NQVECHP  +Q KL EFCKS  I
Sbjct:    6 QRVKLNDGHFIPVLGFGTYAPEEVPKSEALEATKFAIEVGFRHVDSAHLYQNEEQVGQAIRSKIADGTVKREDIFYTSKLWCNSLQPELVRPALEKSLQNLQLDYVDLYIIHSPVSLKPGNKFVPKDESGKLIFDSVDLCHTWEALEKCKDAGLTKSIGVSNFNHKQLEKILNKPGLKYKPVCNQVECHPYLNQSKLLEFCKSHDI 211          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: DDBX_BOVIN (Dihydrodiol dehydrogenase 3 OS=Bos taurus PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.308e-38
Identity = 83/206 (40.29%), Postives = 129/206 (62.62%), Query Frame = 2
Query:   56 QYFELNNGAKMPPIGLGTWQAQHGVVAEAIAIA--IKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQP-----DIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKV--ARVTPAVNQVECHPGWHQEKLHEFCKSKGI 646
            Q  +LN+G  +P +G GT+  +    +EA+ +     +AG+RHID A+ Y NE+++G  ++    DG +KRED++ TSKLW     PE V  A++++L +LQ+DYVDLY++H+PV  K G      ++  +P     D+  TW+A+E   D+G  ++IGVSNF+ K+L+ +L     +  P  NQVECHP ++Q KL +FCKS  I
Sbjct:    6 QRVKLNDGHFIPVLGFGTFAPREVPKSEALEVTKFAIEAGFRHIDSAHLYQNEEQVGQAIRSKIADGTVKREDIFYTSKLWSTSLRPELVRPALEKSLNNLQLDYVDLYIIHFPVALKPGETLFPTDENGKPIFDSVDLCRTWEALEKCKDAGLTKSIGVSNFNHKQLEKILNKPGLKYKPVCNQVECHPYFNQSKLLDFCKSHDI 211          
The following BLAST results are available for this feature:
BLAST of FC923647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
XYL2_CANTR4.065e-4041.55NADPH-dependent D-xylose reductase II,III OS=Candi... [more]
AK1CO_HORSE4.065e-4044.39Aldo-keto reductase family 1 member C23-like prote... [more]
DHB5_MOUSE5.308e-4045.19Estradiol 17 beta-dehydrogenase 5 OS=Mus musculus ... [more]
AKC1H_RAT1.545e-3942.45Aldo-keto reductase family 1 member C18 OS=Rattus ... [more]
AK1C4_MACFA2.017e-3943.27Aldo-keto reductase family 1 member C4 OS=Macaca f... [more]
AKCL2_MACFA2.635e-3940.471,5-anhydro-D-fructose reductase OS=Macaca fascicu... [more]
ALRB_DICDI4.494e-3945.41Aldose reductase B OS=Dictyostelium discoideum GN=... [more]
AK1C4_MACFU5.869e-3942.79Aldo-keto reductase family 1 member C4 OS=Macaca f... [more]
PGFS1_BOVIN1.308e-3841.26Prostaglandin F synthase 1 OS=Bos taurus PE=1 SV=3[more]
DDBX_BOVIN1.308e-3840.29Dihydrodiol dehydrogenase 3 OS=Bos taurus PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionC31707D12EF StrClemenN Citrus clementina cDNA clone C31707D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923647 ID=FC923647; Name=FC923647; organism=Citrus clementina; type=EST; length=721bp
GGGTCATTTCACACACATAACTTGGGAAATGGACCAAATAGCAAACGATA
ACGTTCAATACTTCGAGTTGAACAATGGAGCCAAAATGCCGCCTATCGGA
TTAGGCACATGGCAGGCTCAACATGGTGTTGTTGCCGAAGCCATTGCTAT
TGCCATCAAGCAGGCTGGATACCGTCATATCGATTGTGCTTATTTCTATG
GCAATGAAAAGGAGATTGGTACCGAGCTGAAGAAACTGTTTGAAGATGGA
GTGATCAAGCGTGAGGATCTATGGATCACCTCCAAGCTCTGGTGTTGTGA
TCATGCACCAGAAGATGTACCAAAGGCAATGGACAGAACTTTGCAGGACT
TGCAGATTGATTACGTGGATTTGTACCTCGTGCACTGGCCAGTGCGAACG
AAGAAGGGATTTATAAGCCTCAATCCCGAAGACCTTCTTCAACCAGATAT
ACCAAGCACATGGAAAGCAATGGAGGCACTTTATGATTCTGGCAAGGCTC
GAGCTATCGGAGTTAGTAATTTCTCTGTAAAGAAGCTTCAGGATTTATTG
AAAGTTGCCCGTGTTACTCCTGCTGTTAACCAAGTGGAATGCCACCCTGG
ATGGCACCAGGAAAAGCTACATGAATTTTGCAAATCCAAAGGGATTCACG
TATCTGGATACTCCCCAATGGGTTCCCCAGGCTCACCATGGTTCAAGAGC
GATGTGCTGAAGCATCCGGTT
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