FC923647

Overview
NameFC923647
Unique NameFC923647
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: S6PD_MALDO (NADP-dependent D-sorbitol-6-phosphate dehydrogenase OS=Malus domestica GN=S6PDH PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.650e-36
Identity = 81/202 (40.10%), Postives = 122/202 (60.40%), Query Frame = 2
Query:   68 LNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFIS-----LNPEDLLQPDI----PSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVARVTPAVNQVECHPGWHQEKLHEFCKSKGI 646
            L++G +MP IGLG W+ +   + E I  AIK  GYRH DCA  Y +E ++G  L + F+ G++KRE+L+IT+K+W  DH    V +A   +L+ LQIDY+DLYLVH+P+ TK   I      L  + +L  D+      TW+ ME     G  R+IG+SN+ +   +D L  +++ PAV+Q E HP + ++ L +FC   G+
Sbjct:    6 LSSGYEMPVIGLGLWRLEKDELKEVILNAIK-IGYRHFDCAAHYKSEADVGEALAEAFKTGLVKREELFITTKIWNSDHG--HVVEACKNSLEKLQIDYLDLYLVHYPMPTKHNAIGKTASLLGEDKVLDIDVTISLQQTWEGMEKTVSLGLVRSIGLSNYELFLTRDCLAYSKIKPAVSQFETHPYFQRDSLVKFCMKHGV 204          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: DIDH_RAT (3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus GN=Akr1c9 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.932e-36
Identity = 85/204 (41.67%), Postives = 122/204 (59.80%), Query Frame = 2
Query:   68 LNNGAKMPPIGLGTW---QAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPED------LLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKV--ARVTPAVNQVECHPGWHQEKLHEFCKSKGI 646
            LN+G  +P +G GT    +     V +A  IAI   G+RH D AY Y  E+E+G  ++   EDG +KRED++ TSKLW   H PE V   +++TL+  Q+DYVDLY++H+P+  + G I   P D          DI  TW+AME   D+G A++IGVSNF+ ++L+ +L     +  P  NQVECH   +Q K+ ++CKSK I
Sbjct:   10 LNDGNFIPVLGFGTTVPEKVAKDEVIKATKIAIDN-GFRHFDSAYLYEVEEEVGQAIRSKIEDGTVKREDIFYTSKLWSTFHRPELVRTCLEKTLKSTQLDYVDLYIIHFPMALQPGDIFF-PRDEHGKLLFETVDICDTWEAMEKCKDAGLAKSIGVSNFNCRQLERILNKPGLKYKPVCNQVECHLYLNQSKMLDYCKSKDI 211          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: AK1CD_MOUSE (Aldo-keto reductase family 1 member C13 OS=Mus musculus GN=Akr1c13 PE=1 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 1.036e-35
Identity = 83/204 (40.69%), Postives = 127/204 (62.25%), Query Frame = 2
Query:   65 ELNNGAKMPPIGLGTWQAQH---GVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGF----ISLNPEDLLQP-DIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKV--ARVTPAVNQVECHPGWHQEKLHEFCKSKGI 646
            +LN+G  +P +G GT++ +        EA  +A+   GYRH+D AY Y  E+EIG  ++   + GV+KREDL+IT+KLWC    PE V  A++++L+ LQ+DYVDLY++H+PV  K G     ++   + LL   D   TW+ +E   D+G  ++IGVSNF+ ++L+ +L     +  P  NQVECH   +Q KL ++C+SK I
Sbjct:    9 KLNDGHLIPALGFGTYKPKEVPKSKSLEAACLAL-DVGYRHVDTAYAYQVEEEIGQAIQSKIKAGVVKREDLFITTKLWCTCFRPELVKPALEKSLKKLQLDYVDLYIMHYPVPMKSGDNDFPVNEQGKSLLDTVDFCDTWERLEECKDAGLVKSIGVSNFNHRQLERILNKPGLKYKPVCNQVECHLYLNQRKLLDYCESKDI 211          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: XYL1_CANPA (NADH-dependent D-xylose reductase OS=Candida parapsilosis GN=XYL1 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.715e-35
Identity = 78/207 (37.68%), Postives = 125/207 (60.39%), Query Frame = 2
Query:   65 ELNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTK---------KGFISLNPEDLLQPDIP--STWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVARVTPAVNQVECHPGWHQEKLHEFCKSKGIHV 652
            +LN+G ++P +G G W+  + V ++ I  AIK +GYR  D A  Y NE+E+G  +K+  ++G++KRE+L+ITSKLW   H  ++V  A+ +TL DL +DYVDL+ +H+P+  K          GF   + +     ++P   TW+A+E L D G A++IG+SNFS + + DL++   + P   Q+E HP   Q KL E+ +   I +
Sbjct:   11 KLNSGYEIPLVGFGCWKLTNDVASDQIYRAIK-SGYRLFDGAEDYANEQEVGEGIKRAIKEGIVKREELFITSKLWNSFHDKKNVEVALMKTLSDLNLDYVDLFYIHFPIAQKPVPIEKKYPPGFYCGDGDKWSIEEVPLLDTWRALEKLVDQGLAKSIGISNFSAQLIYDLIRGCTIKPVALQIEHHPYLTQPKLVEYVQLHDIQI 216          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: AK1D1_HUMAN (3-oxo-5-beta-steroid 4-dehydrogenase OS=Homo sapiens GN=AKR1D1 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.715e-35
Identity = 81/204 (39.71%), Postives = 123/204 (60.29%), Query Frame = 2
Query:   68 LNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQA---GYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPED------LLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKV--ARVTPAVNQVECHPGWHQEKLHEFCKSKGI 646
            L++G  +P IGLGT+         A A ++K A   GYRHID AY Y NE E+G  +++   +G ++RED++   KLW  +H PE V   ++RTL+ LQ+DYVDLY++  P+  K G   + P D        + ++ +TW+AMEA  D+G  +++GVSNF+ ++L+ +L     +  P  NQVECHP + Q KL +FC+   I
Sbjct:   12 LSDGNSIPIIGLGTYSEPKSTPKGACATSVKVAIDTGYRHIDGAYIYQNEHEVGEAIREKIAEGKVRREDIFYCGKLWATNHVPEMVRPTLERTLRVLQLDYVDLYIIEVPMAFKPG-DEIYPRDENGKWLYHKSNLCATWEAMEACKDAGLVKSLGVSNFNRRQLELILNKPGLKHKPVSNQVECHPYFTQPKLLKFCQQHDI 214          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: AK1CL_MOUSE (Aldo-keto reductase family 1 member C21 OS=Mus musculus GN=Akr1c21 PE=1 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 8.770e-35
Identity = 81/203 (39.90%), Postives = 119/203 (58.62%), Query Frame = 2
Query:   68 LNNGAKMPPIGLGT---WQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPED-----LLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKV--ARVTPAVNQVECHPGWHQEKLHEFCKSKGI 646
            LN+G  +P +G GT    +       E   IAI  AG+ H D A  Y  E  +G  ++    DG ++RED++ TSK+WC    PE V  +++R+LQ LQ DYVDLYL+H+P+  K G  +   ++       + D+ +TW+AME   D+G  ++IGVSNF+ ++L+ +L     +  P  NQVECHP  +Q KL +FCKSK I
Sbjct:   10 LNDGNFIPVLGFGTALPLECPKSKAKELTKIAI-DAGFHHFDSASVYNTEDHVGEAIRSKIADGTVRREDIFYTSKVWCTSLHPELVRASLERSLQKLQFDYVDLYLIHYPMALKPGEENFPVDEHGKLIFDRVDLCATWEAMEKCKDAGLTKSIGVSNFNYRQLEMILNKPGLKYKPVCNQVECHPYLNQMKLLDFCKSKDI 211          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: AK1D1_RAT (3-oxo-5-beta-steroid 4-dehydrogenase OS=Rattus norvegicus GN=Akr1d1 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.954e-34
Identity = 82/204 (40.20%), Postives = 123/204 (60.29%), Query Frame = 2
Query:   59 YFELNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQA---GYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPED------LLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKV--ARVTPAVNQVECHPGWHQEKLHEFCKS 637
            +  LN+G  +P IGLGT+     V  +   IA+K A   GYRHID AY Y NE E+G  +++   +G +KRE+++   KLW  DH PE V  A++RTLQ L++DY+DLY++  P+  K G     P+D        + ++ +TW+A+EA  D+G  +++GVSNF+ ++L+ +L     +  P  NQVECHP + Q KL E   S
Sbjct:    9 HIPLNDGNSIPIIGLGTYSDPRPVPGKTF-IAVKTAIDEGYRHIDGAYVYRNEHEVGEAIREKVAEGKVKREEIFYCGKLWSTDHDPEMVRPALERTLQTLKLDYIDLYIIEMPMAFKPG-EEFYPKDENGRVIYHKSNLCATWEALEACKDAGLVKSLGVSNFNRRQLEVILNKPGLKYKPVTNQVECHPYFTQTKLLEVSAS 210          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: YPR1_YEAST (Putative reductase 1 OS=Saccharomyces cerevisiae GN=YPR1 PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.552e-34
Identity = 84/211 (39.81%), Postives = 125/211 (59.24%), Query Frame = 2
Query:   65 ELNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPV-----RTKKGFISLNPE--------DLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVA--RVTPAVNQVECHPGWHQEKLHEFCKSKGIHV 652
            +LN GA +P +G GTW++       ++  A+K AGYRHID A  Y NE+E+G  +K    D  + RE+++IT+KLW  +    D   A++++L+ L +DYVDLYL+HWPV     R   G +   P         D  + +   TW+ M+ L  +GK +A+GVSNFS+  +++LL+    +V PA NQ+E HP   Q++L  FCK KGI V
Sbjct:   13 KLNTGASIPVLGFGTWRSVDNNGYHSVIAALK-AGYRHIDAAAIYLNEEEVGRAIK----DSGVPREEIFITTKLWGTEQ--RDPEAALNKSLKRLGLDYVDLYLMHWPVPLKTDRVTDGNVLCIPTLEDGTVDIDTKEWNFIKTWELMQELPKTGKTKAVGVSNFSINNIKELLESPNNKVVPATNQIEIHPLLPQDELIAFCKEKGIVV 216          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: XYL1_TRIRE (NAD(P)H-dependent D-xylose reductase OS=Trichoderma reesei GN=xyl1 PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.552e-34
Identity = 86/208 (41.35%), Postives = 115/208 (55.29%), Query Frame = 2
Query:   65 ELNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWP---------VRTKKGFISLNPEDL---LQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVARVTPAVNQVECHPGWHQEKLHEFCKSKGIHV 652
            +LN+G  MP +G G W+  + V A+ +  AIK AGYR  D A  YGNEKE G  + +  +DG++KREDL+I SKLW   H  + V     R L D QIDY DL+LVH+P         VR   G+      ++       +  TW AME L D G AR+IGVSN+  + + D L  AR+ PA  Q+E HP   Q  L    +++GI V
Sbjct:    7 KLNSGYDMPQVGFGLWKVDNAVCADTVYNAIK-AGYRLFDGACDYGNEKECGEGVARAIKDGLVKREDLFIVSKLWQTFHDEDKVEPITRRQLADWQIDYFDLFLVHFPAALEYVDPSVRYPPGWFYDGKSEVRWSKTTTLQQTWGAMERLVDKGLARSIGVSNYQAQSVYDALIYARIKPATLQIEHHPYLQQPDLVSLAQTEGIVV 213          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: NADO1_ORYSJ (Probable NAD(P)H-dependent oxidoreductase 1 OS=Oryza sativa subsp. japonica GN=Os10g0113000 PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.552e-34
Identity = 85/215 (39.53%), Postives = 119/215 (55.35%), Query Frame = 2
Query:   86 MPPIGLGTWQAQHGVVAEAIAIAIK--QAGYRHIDCAYFYGNEKEIGTELKKLFEDGVI-KREDLWITSKLWCCD-HAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLN-PEDLLQP--DIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVARVTPAVNQVECHPGWHQEKLHEFCKSKGIHVXXXXXXXXXXXXWFKSDVL 709
            MP +G+GT         +  A  ++  + GYRH D A  Y  E  +G  + +    G+I  R D+++TSK+WC D HA   VP A + TL++L +DYVDL LVHWPV    G      P++++ P  D+   W+ ME  +  G ARAIGVSNFS KKL+ LL +A V PAVNQVE +P W Q  L E C+ +G+ +            W  + V+
Sbjct:   16 MPRVGMGTAAFPFTSSEDTTAAMLRAIELGYRHFDTARIYATEGCVGEAVAEAVRRGLIASRADVFVTSKIWCSDLHAGRVVPAARE-TLRNLGMDYVDLLLVHWPVSLTPGNYDFPFPKEVILPSFDMEGVWRGMEECHRLGLARAIGVSNFSAKKLEQLLSLAAVRPAVNQVEVNPMWQQRTLREVCRREGVQLCGYSPLGAKGTPWGSAAVM 229          
The following BLAST results are available for this feature:
BLAST of FC923647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
S6PD_MALDO4.650e-3640.10NADP-dependent D-sorbitol-6-phosphate dehydrogenas... [more]
DIDH_RAT7.932e-3641.673-alpha-hydroxysteroid dehydrogenase OS=Rattus nor... [more]
AK1CD_MOUSE1.036e-3540.69Aldo-keto reductase family 1 member C13 OS=Mus mus... [more]
XYL1_CANPA6.715e-3537.68NADH-dependent D-xylose reductase OS=Candida parap... [more]
AK1D1_HUMAN6.715e-3539.713-oxo-5-beta-steroid 4-dehydrogenase OS=Homo sapie... [more]
AK1CL_MOUSE8.770e-3539.90Aldo-keto reductase family 1 member C21 OS=Mus mus... [more]
AK1D1_RAT1.954e-3440.203-oxo-5-beta-steroid 4-dehydrogenase OS=Rattus nor... [more]
YPR1_YEAST2.552e-3439.81Putative reductase 1 OS=Saccharomyces cerevisiae G... [more]
XYL1_TRIRE2.552e-3441.35NAD(P)H-dependent D-xylose reductase OS=Trichoderm... [more]
NADO1_ORYSJ2.552e-3439.53Probable NAD(P)H-dependent oxidoreductase 1 OS=Ory... [more]

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Properties
Property NameValue
Genbank descriptionC31707D12EF StrClemenN Citrus clementina cDNA clone C31707D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923647 ID=FC923647; Name=FC923647; organism=Citrus clementina; type=EST; length=721bp
GGGTCATTTCACACACATAACTTGGGAAATGGACCAAATAGCAAACGATA
ACGTTCAATACTTCGAGTTGAACAATGGAGCCAAAATGCCGCCTATCGGA
TTAGGCACATGGCAGGCTCAACATGGTGTTGTTGCCGAAGCCATTGCTAT
TGCCATCAAGCAGGCTGGATACCGTCATATCGATTGTGCTTATTTCTATG
GCAATGAAAAGGAGATTGGTACCGAGCTGAAGAAACTGTTTGAAGATGGA
GTGATCAAGCGTGAGGATCTATGGATCACCTCCAAGCTCTGGTGTTGTGA
TCATGCACCAGAAGATGTACCAAAGGCAATGGACAGAACTTTGCAGGACT
TGCAGATTGATTACGTGGATTTGTACCTCGTGCACTGGCCAGTGCGAACG
AAGAAGGGATTTATAAGCCTCAATCCCGAAGACCTTCTTCAACCAGATAT
ACCAAGCACATGGAAAGCAATGGAGGCACTTTATGATTCTGGCAAGGCTC
GAGCTATCGGAGTTAGTAATTTCTCTGTAAAGAAGCTTCAGGATTTATTG
AAAGTTGCCCGTGTTACTCCTGCTGTTAACCAAGTGGAATGCCACCCTGG
ATGGCACCAGGAAAAGCTACATGAATTTTGCAAATCCAAAGGGATTCACG
TATCTGGATACTCCCCAATGGGTTCCCCAGGCTCACCATGGTTCAAGAGC
GATGTGCTGAAGCATCCGGTT
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