FC923647

Overview
NameFC923647
Unique NameFC923647
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: ARA1_YEAST (D-arabinose dehydrogenase [NAD(P)+] heavy chain OS=Saccharomyces cerevisiae GN=ARA1 PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.552e-34
Identity = 91/211 (43.13%), Postives = 126/211 (59.72%), Query Frame = 2
Query:   59 YFELNNGAKMPPIGLGTWQAQHGVVAE---AIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWP-----VRTKKGFISL--NPED-------LLQPDIPSTWKAMEALY---DSGKARAIGVSNFSVKKLQDLLKVARVTPAVNQVECHPGWHQEKLHEFC 631
            YF LNNG ++P +GLGT    H  +AE   A+  AIK AGYRHID A+ Y  E  +G  +K+L EDG IKREDL+IT+K+W      ++V ++++ +L+ L ++YVDL L HWP     ++  KG   L   P D           D   T+K +E +Y   +  + RAIGVSNFS++ L+ L+K  RV P VNQVE HP   Q +L +FC
Sbjct:   24 YFSLNNGVRIPALGLGTANP-HEKLAETKQAVKAAIK-AGYRHIDTAWAYETEPFVGEAIKELLEDGSIKREDLFITTKVW--PVLWDEVDRSLNESLKALGLEYVDLLLQHWPLCFEKIKDPKGISGLVKTPVDDSGKTMYAADGDYLETYKQLEKIYLDPNDHRVRAIGVSNFSIEYLERLIKECRVKPTVNQVETHPHLPQMELRKFC 230          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: XYL1_ASPNG (NAD(P)H-dependent D-xylose reductase OS=Aspergillus niger GN=xyrA PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.333e-34
Identity = 85/206 (41.26%), Postives = 118/206 (57.28%), Query Frame = 2
Query:   65 ELNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWP---------VRTKKGFISLNPE-DLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVARVTPAVNQVECHPGWHQEKLHEFCKSKGIHV 652
            +LN+G  MP +G G W+  +   A+ I  AIK+ GYR  D A  YGNE E G  + +  +DG++KRE+L+I SKLW   H  + V     + L D  IDY DLY+VH+P         VR   G+ S   E +     I  TW AME+L D   AR+IG+SNFS + + DLL+ AR+ PA  Q+E HP   Q +L E+ + +G+ V
Sbjct:    7 KLNSGYDMPLVGFGLWKVNNDTCADQIYHAIKE-GYRLFDGACDYGNEVEAGQGIARAIKDGLVKREELFIVSKLWNSFHDGDRVEPICRKQLADWGIDYFDLYIVHFPISLKYVDPAVRYPPGWKSEKDELEFGNATIQETWTAMESLVDKKLARSIGISNFSAQLVMDLLRYARIRPATLQIEHHPYLTQTRLVEYAQKEGLTV 211          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: AK1D1_MOUSE (3-oxo-5-beta-steroid 4-dehydrogenase OS=Mus musculus GN=Akr1d1 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.685e-33
Identity = 78/204 (38.24%), Postives = 124/204 (60.78%), Query Frame = 2
Query:   68 LNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQA---GYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPED------LLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKV--ARVTPAVNQVECHPGWHQEKLHEFCKSKGI 646
            L++G  +P IGLGT+     V  +   +A+K A   GYRHID AY Y NE E+G  +++   +G +KRE+++   KLW  +H P  V  A++RTL+ L++DY+DLY++  P+  K G   + P D        + ++ +TW+A+EA  D+G  +++GVSNF+ ++L+ +L     +  P  NQVECHP + Q KL +FC+   I
Sbjct:   12 LSDGNNIPLIGLGTYSDPRPVPGKTY-VAVKTAIDEGYRHIDGAYVYHNEHEVGEAIREKIAEGKVKREEIFYCGKLWNTEHVPSMVLPALERTLKALKLDYIDLYIIELPMAFKPG-KEIYPRDENGRIIYDKTNLCATWEALEACKDAGLVKSLGVSNFNRRQLELILNKPGLKYKPVTNQVECHPYFTQTKLLKFCQQHDI 213          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: AK1CL_RAT (Aldo-keto reductase family 1 member C21 OS=Rattus norvegicus GN=Akr1c21 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.285e-33
Identity = 81/211 (38.39%), Postives = 122/211 (57.82%), Query Frame = 2
Query:   44 NDNVQYFELNNGAKMPPIGLGTWQAQH---GVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPED---LL--QPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKV--ARVTPAVNQVECHPGWHQEKLHEFCKSKGI 646
            N      +LN+G  +P +G GT            E   IAI  AG+ H D A+ Y  E  +G  +++   +G  +RED++ TSKLWC    PE V  +++ +L+ LQ+DYVDLYL+H+P+  K G  +   ++   LL    D+ +TW+AME   D+G A++IGVSNF+ ++L+ +L     +  P  NQVECH   +Q KL +FCK+ GI
Sbjct:    2 NSKCHCVKLNDGHFIPVLGFGTAMPSELPKSKAKEVTKIAI-DAGFHHFDSAFVYNTEDHVGEAIREKIANGTTRREDIFYTSKLWCTSLHPELVRSSLECSLKKLQLDYVDLYLIHFPMALKPGDENFPVDEHGKLLFDTVDLCATWEAMEKCKDAGLAKSIGVSNFNRRQLEKILNKPGLKYKPVCNQVECHLYLNQMKLLDFCKTNGI 211          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: NADO2_ORYSJ (Probable NAD(P)H-dependent oxidoreductase 2 OS=Oryza sativa subsp. japonica GN=Os10g0113100 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.072e-32
Identity = 84/215 (39.07%), Postives = 114/215 (53.02%), Query Frame = 2
Query:   86 MPPIGLGTWQAQHGVVAEAIAIAIK--QAGYRHIDCAYFYGNEKEIGTELKKLFEDGVI-KREDLWITSKLWCCD-HAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLN-PEDLLQP--DIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVARVTPAVNQVECHPGWHQEKLHEFCKSKGIHVXXXXXXXXXXXXWFKSDVL 709
            MP IG+GT         E  A  ++  + GYRH D A  Y  E  +   + +    G++  R D+++TSKLWC D HA   VP A + TL++L +DYVDL LVHWP     G      P++ + P  D+   W+ ME  +  G ARAIGVSNFS KKL+ LL  A V PA NQVE +P W Q  L E C+ +G+ +            W  + V+
Sbjct:   18 MPRIGMGTAAFPFTSSEETTAALLRAIELGYRHFDTARLYATEGCVSEAVAEAVRRGLVASRADVFVTSKLWCSDLHAGRVVPAARE-TLRNLGMDYVDLLLVHWPATVAPGSYDFPFPKEEMAPAFDMEGVWRGMEECHRLGLARAIGVSNFSAKKLEQLLSFAVVRPAANQVEMNPMWQQRTLREVCRREGVQLCGYSPLGAKGTPWGSAAVM 231          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: AK1D1_RABIT (3-oxo-5-beta-steroid 4-dehydrogenase OS=Oryctolagus cuniculus GN=AKR1D1 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.072e-32
Identity = 79/205 (38.54%), Postives = 122/205 (59.51%), Query Frame = 2
Query:   68 LNNGAKMPPIGLGTWQ----AQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPED------LLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKV--ARVTPAVNQVECHPGWHQEKLHEFCKSKGI 646
            L +G  +P IGLGT+        G  A ++ IAI   GYRHID AY Y NE E+G   ++   +G ++RED++   KLW  +H P  V   ++RTL+ L++DY+DLY++  P+  K G + + P D        + ++ +TW+A+EA  D+G  +++GVSNF+ ++L+ LL     +  P  NQVECHP + Q KL +FC+   I
Sbjct:   12 LGDGNSIPIIGLGTYSEPKTTPKGSCATSVKIAI-DTGYRHIDGAYIYQNEHEVGETFREKIAEGKVRREDIFYCGKLWATNHDPVMVRPTLERTLKVLKLDYIDLYIIEIPMAFKPGDV-VYPRDENGKWLYHKTNLCATWEALEACKDAGLVKSLGVSNFNRQQLELLLNKPGLKHKPVCNQVECHPYFTQPKLLKFCQQHDI 214          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: DTDH_MUCMU (4-dihydromethyl-trisporate dehydrogenase OS=Mucor mucedo GN=tdh PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.388e-32
Identity = 83/213 (38.97%), Postives = 118/213 (55.40%), Query Frame = 2
Query:   50 NVQYFELNN-GAKMPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTK---------KGFISLNPEDLL--QPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVARVTPAVNQVECHPGWHQEKLHEFCKSKGIHV 652
            +  Y  LN  G KMP  G G W+       E +  AIK  GYR  D A  YGNE E+G  + K   +G++KREDL+I +KLW   H+ + V    DR L+D  ++Y DLYL+H+PV  +          G+   + + L   Q  I   W  +E + D+G AR IGV+NF+ + + DLL  AR+ PAV Q+E HP   QE+L ++ K +GI +
Sbjct:    2 STDYLTLNRTGDKMPIRGFGCWKIDTKDCEETVYQAIK-TGYRLFDGACDYGNEVEVGRGINKAINEGLVKREDLFIVTKLWNTFHSKKHVRALFDRQLKDTGLEYFDLYLIHFPVPLQYVDPATVYPPGWYVGDAKSLQFEQSPIHECWAELEKIVDAGLARNIGVANFNCQAILDLLTYARIKPAVLQIELHPYLPQERLVKWVKEQGIQI 213          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: AK1CD_MESAU (Aldo-keto reductase family 1 member C13 OS=Mesocricetus auratus GN=AKR1C13 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.321e-32
Identity = 77/201 (38.31%), Postives = 121/201 (60.20%), Query Frame = 2
Query:   74 NGAKMPPIGLGTW---QAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPED-----LLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKV--ARVTPAVNQVECHPGWHQEKLHEFCKSKGI 646
            +G  +P +G GT+   +       EA  +AI   GYRHID AY Y  E+EIG  ++   + G++KRED++IT+KLWC    PE V  ++++    LQ+++VDL+++H+PV  K G      ++     L   D  +TW+A+E   D+G  ++IGVSNF++++L+ +L     +  P  NQVECH   +Q KL ++CKSK I
Sbjct:   12 DGHCIPALGFGTYKPIEVPKSKAMEAANLAIG-VGYRHIDTAYAYQIEEEIGQAIQSNIKAGIVKREDMFITTKLWCTCFQPELVRPSLEKXXXKLQLEHVDLFIMHYPVPMKAGDNDFPLDEQGKLLLDTVDFCATWEALEKXXDAGLVKSIGVSNFNMRQLERILNKPGLKYKPVCNQVECHVYNNQSKLLDYCKSKDI 211          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: Y2408_MYCS2 (Uncharacterized oxidoreductase MSMEG_2408 OS=Mycobacterium smegmatis GN=MSMEG_2408 PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.683e-31
Identity = 75/193 (38.86%), Postives = 105/193 (54.40%), Query Frame = 2
Query:   68 LNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVARVTPAVNQVECHPGWHQEKLHEFCKSKGI 646
            LN+G  +P +GLG WQ        A+A A+ QAGYRHID A  Y NE E G    +   +  + RED+++ +KLW  D   +    A D ++Q L +DY+DLYL+HWPV     F+              T+KA   L D G+ R+IGVSNF  + L  L++   + PAVNQ+E HP   Q++L +     GI
Sbjct:    7 LNDGNSIPQVGLGVWQTPAEDTERAVAAAL-QAGYRHIDTAAAYRNETETG----RAIANSGVPREDIFLVTKLWNSDQGYDATLAAFDASVQRLGVDYLDLYLIHWPVPENNKFV-------------DTFKAFAHLRDQGRIRSIGVSNFEPEHLTTLIEETGIVPAVNQIELHPLLPQQELRDVHAKLGI 181          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: MORA_PSEPU (Morphine 6-dehydrogenase OS=Pseudomonas putida GN=morA PE=1 SV=3)

HSP 1 Score: 133.265 bits (334), Expect = 1.311e-30
Identity = 77/193 (39.90%), Postives = 110/193 (56.99%), Query Frame = 2
Query:   68 LNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVARVTPAVNQVECHPGWHQEKLHEFCKSKGI 646
            LNNG KMP +GLG + A     A AIA AI  +GYR ID A  Y NE ++G  ++    +  + R ++++T+KL+ CD+  E   +A D +L  L +DYVDLYL+HWP +     I              +WKA E +   G+ARAIGV NF   +L +L+  + V PAVNQ+E HP + Q+ L    ++ GI
Sbjct:   10 LNNGVKMPALGLGVFAASAEETASAIASAIS-SGYRLIDTARSYNNEAQVGEGIR----NSGVDRAEMFVTTKLFNCDYGYERALRAFDESLGRLGLDYVDLYLLHWPTKDWNATIQ-------------SWKAAEKILGDGRARAIGVCNFLEDQLDELIAASDVVPAVNQIELHPYFAQKPLLAKNRALGI 184          
The following BLAST results are available for this feature:
BLAST of FC923647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
ARA1_YEAST2.552e-3443.13D-arabinose dehydrogenase [NAD(P)+] heavy chain OS... [more]
XYL1_ASPNG3.333e-3441.26NAD(P)H-dependent D-xylose reductase OS=Aspergillu... [more]
AK1D1_MOUSE3.685e-3338.243-oxo-5-beta-steroid 4-dehydrogenase OS=Mus muscul... [more]
AK1CL_RAT6.285e-3338.39Aldo-keto reductase family 1 member C21 OS=Rattus ... [more]
NADO2_ORYSJ1.072e-3239.07Probable NAD(P)H-dependent oxidoreductase 2 OS=Ory... [more]
AK1D1_RABIT1.072e-3238.543-oxo-5-beta-steroid 4-dehydrogenase OS=Oryctolagu... [more]
DTDH_MUCMU2.388e-3238.974-dihydromethyl-trisporate dehydrogenase OS=Mucor ... [more]
AK1CD_MESAU5.321e-3238.31Aldo-keto reductase family 1 member C13 OS=Mesocri... [more]
Y2408_MYCS27.683e-3138.86Uncharacterized oxidoreductase MSMEG_2408 OS=Mycob... [more]
MORA_PSEPU1.311e-3039.90Morphine 6-dehydrogenase OS=Pseudomonas putida GN=... [more]

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Properties
Property NameValue
Genbank descriptionC31707D12EF StrClemenN Citrus clementina cDNA clone C31707D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923647 ID=FC923647; Name=FC923647; organism=Citrus clementina; type=EST; length=721bp
GGGTCATTTCACACACATAACTTGGGAAATGGACCAAATAGCAAACGATA
ACGTTCAATACTTCGAGTTGAACAATGGAGCCAAAATGCCGCCTATCGGA
TTAGGCACATGGCAGGCTCAACATGGTGTTGTTGCCGAAGCCATTGCTAT
TGCCATCAAGCAGGCTGGATACCGTCATATCGATTGTGCTTATTTCTATG
GCAATGAAAAGGAGATTGGTACCGAGCTGAAGAAACTGTTTGAAGATGGA
GTGATCAAGCGTGAGGATCTATGGATCACCTCCAAGCTCTGGTGTTGTGA
TCATGCACCAGAAGATGTACCAAAGGCAATGGACAGAACTTTGCAGGACT
TGCAGATTGATTACGTGGATTTGTACCTCGTGCACTGGCCAGTGCGAACG
AAGAAGGGATTTATAAGCCTCAATCCCGAAGACCTTCTTCAACCAGATAT
ACCAAGCACATGGAAAGCAATGGAGGCACTTTATGATTCTGGCAAGGCTC
GAGCTATCGGAGTTAGTAATTTCTCTGTAAAGAAGCTTCAGGATTTATTG
AAAGTTGCCCGTGTTACTCCTGCTGTTAACCAAGTGGAATGCCACCCTGG
ATGGCACCAGGAAAAGCTACATGAATTTTGCAAATCCAAAGGGATTCACG
TATCTGGATACTCCCCAATGGGTTCCCCAGGCTCACCATGGTTCAAGAGC
GATGTGCTGAAGCATCCGGTT
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