FC923647

Overview
NameFC923647
Unique NameFC923647
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: DKGA_ECOLI (2,5-diketo-D-gluconic acid reductase A OS=Escherichia coli (strain K12) GN=dkgA PE=1 SV=3)

HSP 1 Score: 128.642 bits (322), Expect = 3.228e-29
Identity = 75/191 (39.27%), Postives = 105/191 (54.97%), Query Frame = 2
Query:   50 NVQYFELNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVARVTPAVNQVECHPGWHQEKLH 622
            N    +L +G  MP +GLG WQA +  V  AI  A+ + GYR ID A  Y NE+ +G  LK    +  + RE+L+IT+KLW  DH  +   +A+  +L+ LQ+DY+DLYL+HWPV     ++               WK M  L   G  ++IGV NF +  LQ L+    VTP +NQ+E HP   Q +LH
Sbjct:    3 NPTVIKLQDGNVMPQLGLGVWQASNEEVITAIQKAL-EVGYRSIDTAAAYKNEEGVGKALK----NASVNREELFITTKLWNDDH--KRPREALLDSLKKLQLDYIDLYLMHWPVPAIDHYVE-------------AWKGMIELQKEGLIKSIGVCNFQIHHLQRLIDETGVTPVINQIELHPLMQQRQLH 173          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: DKGA_YERPE (2,5-diketo-D-gluconic acid reductase A OS=Yersinia pestis GN=dkgA PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.227e-28
Identity = 74/187 (39.57%), Postives = 104/187 (55.61%), Query Frame = 2
Query:   65 ELNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCD-HAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVARVTPAVNQVECHPGWHQEKLH 622
            +L +G  MP +GLG WQA       A++ A+ + GYR ID A  Y NE+ +G  LK       + R++L+IT+KLW  D H P+   +A++ +LQ LQ+DYVDLYL+HWP             D  Q    S W+ +  L + G  R+IGV NF +  LQ L+    + P VNQ+E HP   Q +LH
Sbjct:    8 KLYDGRLMPQLGLGVWQASIQETELAVSKAL-EVGYRSIDTAAIYKNEEGVGKALKA----AAVARDELFITTKLWNDDQHNPQ---QALETSLQKLQLDYVDLYLIHWP-------------DPKQDHYVSAWRELVTLKEQGLIRSIGVCNFHIPHLQRLIDETGIAPTVNQIELHPLLQQRQLH 173          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: DKGA_ECO57 (2,5-diketo-D-gluconic acid reductase A OS=Escherichia coli O157:H7 GN=dkgA PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.227e-28
Identity = 74/191 (38.74%), Postives = 103/191 (53.93%), Query Frame = 2
Query:   50 NVQYFELNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVARVTPAVNQVECHPGWHQEKLH 622
            N    +L +G  MP +GLG WQA +  V  AI  A+ + GYR  D A  Y NE+ +G  LK    +  + RE+L+IT+KLW  DH      +A+  +L+ LQ+DY+DLYL+HWPV     ++               WK M  L   G  ++IGV NF +  LQ L+    VTP +NQ+E HP   Q +LH
Sbjct:    3 NPTVIKLQDGNVMPQLGLGVWQASNEEVITAIQKAL-EVGYRSFDTAAAYKNEEGVGKALK----NASVNREELFITTKLWNDDH--NRPREALLDSLKKLQLDYIDLYLMHWPVPAIDHYVE-------------AWKGMIELQKEGLIKSIGVCNFQIHHLQRLIDETGVTPVINQIELHPLMQQRQLH 173          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: YOF5_CAEEL (Uncharacterized oxidoreductase ZK1290.5 OS=Caenorhabditis elegans GN=ZK1290.5 PE=2 SV=3)

HSP 1 Score: 126.331 bits (316), Expect = 1.602e-28
Identity = 72/193 (37.31%), Postives = 112/193 (58.03%), Query Frame = 2
Query:   68 LNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVARVTPAVNQVECHPGWHQEKLHEFCKSKGI 646
            L+N  +MP IGLGT  +  G   +A+  +IK+ GYR ID A  YG EK++G  +K       + RE++++++KLW  D   ++V  A   + + LQ DY+D+Y++H P         +N ++  +     TW+ ME LY+    R+IGVSN+S++ L +LL+ A + P  NQVE HP +HQ  L  +C   GI
Sbjct:    7 LSNNVEMPLIGLGTTHSG-GYYHDAVLHSIKKCGYRLIDTAKRYGVEKQLGIAVKNCS----VPREEMFLSTKLWPVD-CGDEVYNAFQTSCEKLQTDYLDMYMIHMPQLPDW---IVNQKETKE----KTWRQMELLYEDEHVRSIGVSNYSIEDLDELLEFASILPHANQVELHPWFHQADLKNYCDELGI 186          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: DKGA_SALTY (2,5-diketo-D-gluconic acid reductase A OS=Salmonella typhimurium GN=dkgA PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.092e-28
Identity = 74/191 (38.74%), Postives = 103/191 (53.93%), Query Frame = 2
Query:   50 NVQYFELNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVARVTPAVNQVECHPGWHQEKLH 622
            N     L +G  MP +GLG W+A +  V  AI  A+ + GYR ID A  Y NE+ +G  LK       + RE+L+IT+KLW  D   +   +A+  +L+ LQ+DY+DLYL+HWPV     ++               WK M AL   G  ++IGV NF +  LQ L+    VTP +NQ+E HP   Q +LH
Sbjct:    3 NPTIIRLQDGNVMPQLGLGVWKASNEEVIAAIHKAL-EVGYRSIDTATAYQNEEGVGKALKA----ASVAREELFITTKLWNDDQ--KRPREALQESLKKLQLDYLDLYLMHWPVPAIDHYVD-------------AWKGMIALQKEGLVKSIGVCNFQIHHLQRLIDETGVTPVINQIELHPLMQQRQLH 173          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: I3ACR_SCHPO (NAD/NADP-dependent indole-3-acetaldehyde reductase OS=Schizosaccharomyces pombe GN=SPAC19G12.09 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.569e-28
Identity = 74/196 (37.76%), Postives = 116/196 (59.18%), Query Frame = 2
Query:   86 MPPIGLGT--WQAQHGVVAEAIAIAIKQA---GYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVARVTPAVNQVECHPGWHQ--EKLHEFCKSKGIHV 652
            +P  G+GT  ++ + G +   I  ++K A   G+ HIDCA  YGNE+E+G  LK    +  + R  L+ITSK+    H  +++P+A++ +L+ L  DY+DLYL+H P+   +  I ++            WKAME    +G   ++GVSNF +  L++LLK + +TP VNQ+E HP  ++  + L EFC+SKGI V
Sbjct:   12 VPAYGVGTALFKKEKGEINRTIVDSVKNALAAGFIHIDCAEVYGNEEEVGVALK----EANVPRSKLFITSKVM---HNVDNIPEALNESLRKLGTDYLDLYLLHSPIPFYEKKIPIS----------EGWKAMETALGTGLVHSVGVSNFRIPDLEELLKTSTITPRVNQIEFHPQVYKAAKPLVEFCQSKGIIV 190          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: Y1985_MYCSK (Uncharacterized oxidoreductase Mkms_1985 OS=Mycobacterium sp. (strain KMS) GN=Mkms_1985 PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.088e-28
Identity = 70/193 (36.27%), Postives = 105/193 (54.40%), Query Frame = 2
Query:   68 LNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVARVTPAVNQVECHPGWHQEKLHEFCKSKGI 646
            LN+G  +P +GLG WQ        A+A A+  AGYRH+D A  YGNE++ G   + + + G + R  +++ +KLW  +   +    A + ++  L +DY+DLYL+HWPV  K  F+              T+KA   L + G+ R+IGVSNF  + L+ L+    + PAVNQ+E HP   Q +L E     GI
Sbjct:    8 LNDGNSIPQVGLGVWQTPPEDTERAVAAALA-AGYRHVDTAAAYGNEEQTG---RAIAQSG-LDRSQVYLVTKLWNSEQGYDATLAAFEASVDRLGVDYLDLYLIHWPVPEKNLFVD-------------TFKAFARLREDGRIRSIGVSNFEPEHLRVLIDSTGIVPAVNQIELHPLLPQRELRELHAQLGI 182          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: DKGA_SALTI (Putative 2,5-diketo-D-gluconic acid reductase A OS=Salmonella typhi GN=dkgA PE=5 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.038e-27
Identity = 73/191 (38.22%), Postives = 102/191 (53.40%), Query Frame = 2
Query:   50 NVQYFELNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVARVTPAVNQVECHPGWHQEKLH 622
            N     L +G  MP +GLG W+A +  V  AI  A+ + GYR ID A  Y NE+ +G  LK       + RE+L+IT+KLW  D   +   +A+  +L+ LQ+DY+DLYL+HWPV     ++               WK M AL   G  ++IGV NF +  LQ L+    V P +NQ+E HP   Q +LH
Sbjct:    3 NPTIIRLQDGNVMPQLGLGVWKASNEEVIAAIHKAL-EVGYRSIDTATAYQNEEGVGKALKA----ASVAREELFITTKLWNDDQ--KRPREALQESLKKLQLDYLDLYLMHWPVPAIDHYVD-------------AWKGMIALQKEGLVKSIGVCNFQIHHLQRLIDETGVPPVINQIELHPLMQQRQLH 173          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: Y1919_MYCSJ (Uncharacterized oxidoreductase Mjls_1919 OS=Mycobacterium sp. (strain JLS) GN=Mjls_1919 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.356e-27
Identity = 69/193 (35.75%), Postives = 105/193 (54.40%), Query Frame = 2
Query:   68 LNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVARVTPAVNQVECHPGWHQEKLHEFCKSKGI 646
            LN+G  +P +GLG WQ        A+A A+  AGYRH+D A  YGNE++ G   + + + G + R  +++ +KLW  +   +    A + ++  L +DY+DLYL+HWPV  K  F+              T++A   L + G+ R+IGVSNF  + L+ L+    + PAVNQ+E HP   Q +L E     GI
Sbjct:    8 LNDGNSIPQVGLGVWQTPPEDTERAVAAALA-AGYRHVDTAAAYGNEEQTG---RAIAQSG-LDRSQVYLVTKLWNSEQGYDATLAAFEASVDRLGVDYLDLYLIHWPVPEKNLFVD-------------TFRAFARLREDGRIRSIGVSNFEPEHLRVLIDSTGIVPAVNQIELHPLLPQRELRELHAQLGI 182          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: YJ66_YEAST (Uncharacterized oxidoreductase YJR096W OS=Saccharomyces cerevisiae GN=YJR096W PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.154e-27
Identity = 73/204 (35.78%), Postives = 114/204 (55.88%), Query Frame = 2
Query:   56 QYFELNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKK-LFED-GVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQ-IDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVARV--TPAVNQVECHPGWHQEKLHEFCKSKGIHV 652
            ++++L+NG K+P I LGT+       AE +   +K  GYRH D A  YGNEKE+G  + K L ED G  KRE+++ T+KLW   +  +    A+ + L ++  + Y+DL L+H P+   K  +              TW+AM+   D G  ++IGVSN+  K + +LL    +   P VNQ+E  P   +++L ++CKSKG+ V
Sbjct:    4 KFYKLSNGFKIPSIALGTYDIPRSQTAEIVYEGVK-CGYRHFDTAVLYGNEKEVGDGIIKWLNEDPGNHKREEIFYTTKLWNSQNGYKRAKAAIRQCLNEVSGLQYIDLLLIHSPLEGSKLRLE-------------TWRAMQEAVDEGLVKSIGVSNYGKKHIDELLNWPELKHKPVVNQIEISPWIMRQELADYCKSKGLVV 193          
The following BLAST results are available for this feature:
BLAST of FC923647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
DKGA_ECOLI3.228e-2939.272,5-diketo-D-gluconic acid reductase A OS=Escheric... [more]
DKGA_YERPE1.227e-2839.572,5-diketo-D-gluconic acid reductase A OS=Yersinia... [more]
DKGA_ECO571.227e-2838.742,5-diketo-D-gluconic acid reductase A OS=Escheric... [more]
YOF5_CAEEL1.602e-2837.31Uncharacterized oxidoreductase ZK1290.5 OS=Caenorh... [more]
DKGA_SALTY2.092e-2838.742,5-diketo-D-gluconic acid reductase A OS=Salmonel... [more]
I3ACR_SCHPO3.569e-2837.76NAD/NADP-dependent indole-3-acetaldehyde reductase... [more]
Y1985_MYCSK6.088e-2836.27Uncharacterized oxidoreductase Mkms_1985 OS=Mycoba... [more]
DKGA_SALTI1.038e-2738.22Putative 2,5-diketo-D-gluconic acid reductase A OS... [more]
Y1919_MYCSJ1.356e-2735.75Uncharacterized oxidoreductase Mjls_1919 OS=Mycoba... [more]
YJ66_YEAST5.154e-2735.78Uncharacterized oxidoreductase YJR096W OS=Saccharo... [more]

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Properties
Property NameValue
Genbank descriptionC31707D12EF StrClemenN Citrus clementina cDNA clone C31707D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923647 ID=FC923647; Name=FC923647; organism=Citrus clementina; type=EST; length=721bp
GGGTCATTTCACACACATAACTTGGGAAATGGACCAAATAGCAAACGATA
ACGTTCAATACTTCGAGTTGAACAATGGAGCCAAAATGCCGCCTATCGGA
TTAGGCACATGGCAGGCTCAACATGGTGTTGTTGCCGAAGCCATTGCTAT
TGCCATCAAGCAGGCTGGATACCGTCATATCGATTGTGCTTATTTCTATG
GCAATGAAAAGGAGATTGGTACCGAGCTGAAGAAACTGTTTGAAGATGGA
GTGATCAAGCGTGAGGATCTATGGATCACCTCCAAGCTCTGGTGTTGTGA
TCATGCACCAGAAGATGTACCAAAGGCAATGGACAGAACTTTGCAGGACT
TGCAGATTGATTACGTGGATTTGTACCTCGTGCACTGGCCAGTGCGAACG
AAGAAGGGATTTATAAGCCTCAATCCCGAAGACCTTCTTCAACCAGATAT
ACCAAGCACATGGAAAGCAATGGAGGCACTTTATGATTCTGGCAAGGCTC
GAGCTATCGGAGTTAGTAATTTCTCTGTAAAGAAGCTTCAGGATTTATTG
AAAGTTGCCCGTGTTACTCCTGCTGTTAACCAAGTGGAATGCCACCCTGG
ATGGCACCAGGAAAAGCTACATGAATTTTGCAAATCCAAAGGGATTCACG
TATCTGGATACTCCCCAATGGGTTCCCCAGGCTCACCATGGTTCAAGAGC
GATGTGCTGAAGCATCCGGTT
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