FC923656
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923656 vs. ExPASy Swiss-Prot
Match: PCY1B_RAT (Choline-phosphate cytidylyltransferase B OS=Rattus norvegicus GN=Pcyt1b PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.282e-19 Identity = 52/156 (33.33%), Postives = 86/156 (55.13%), Query Frame = 2 Query: 164 VYIDGAFDLFHAGHVEILKKARQL--GDLLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIANHEAYMKRNAKKAVSEKK 625 VY DG FDLFH+GH L +A+ L LLVG+ +D + + +G +M+ ER ++ CRYVDEVI APW +T + + I V H + ++ G D Y+ K G+F + + I+T+ + RI+ +++ Y +RN ++ + K+ Sbjct: 79 VYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKG--FTVMNEAERYEALRHCRYVDEVIRDAPWTLTPEFLEKHKIDFVAHDDIPYSS---AGSDDVYKHIKEAGMFVPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKE 229
BLAST of FC923656 vs. ExPASy Swiss-Prot
Match: PCY1B_MOUSE (Choline-phosphate cytidylyltransferase B OS=Mus musculus GN=Pcyt1b PE=1 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 2.282e-19 Identity = 52/156 (33.33%), Postives = 86/156 (55.13%), Query Frame = 2 Query: 164 VYIDGAFDLFHAGHVEILKKARQL--GDLLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIANHEAYMKRNAKKAVSEKK 625 VY DG FDLFH+GH L +A+ L LLVG+ +D + + +G +M+ ER ++ CRYVDEVI APW +T + + I V H + ++ G D Y+ K G+F + + I+T+ + RI+ +++ Y +RN ++ + K+ Sbjct: 79 VYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKG--FTVMNEAERYEALRHCRYVDEVIRDAPWTLTPEFLEKHKIDFVAHDDIPYSS---AGSDDVYKHIKEAGMFVPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKE 229
BLAST of FC923656 vs. ExPASy Swiss-Prot
Match: PCY1B_HUMAN (Choline-phosphate cytidylyltransferase B OS=Homo sapiens GN=PCYT1B PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.282e-19 Identity = 52/156 (33.33%), Postives = 86/156 (55.13%), Query Frame = 2 Query: 164 VYIDGAFDLFHAGHVEILKKARQL--GDLLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIANHEAYMKRNAKKAVSEKK 625 VY DG FDLFH+GH L +A+ L LLVG+ +D + + +G +M+ ER ++ CRYVDEVI APW +T + + I V H + ++ G D Y+ K G+F + + I+T+ + RI+ +++ Y +RN ++ + K+ Sbjct: 79 VYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKG--FTVMNEAERYEALRHCRYVDEVIRDAPWTLTPEFLEKHKIDFVAHDDIPYSS---AGSDDVYKHIKEAGMFVPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKE 229
BLAST of FC923656 vs. ExPASy Swiss-Prot
Match: PCY1_SCHPO (Probable choline-phosphate cytidylyltransferase OS=Schizosaccharomyces pombe GN=SPCC1827.02c PE=1 SV=3) HSP 1 Score: 84.3445 bits (207), Expect = 6.871e-16 Identity = 49/156 (31.41%), Postives = 85/156 (54.49%), Query Frame = 2 Query: 164 VYIDGAFDLFHAGHVEILKKARQL--GDLLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIANHEAYMKRNAKKAVSEKK 625 VY DG FDLFH GH+ L++A+++ L+VG+ DQ+ HR +M+ ER+ ++ C++VDEV+ APW +T + + I V H + + D Y K +G F + + ++T+ + RII +++ Y+ RN + V+ K+ Sbjct: 104 VYADGVFDLFHIGHMRQLEQAKKVFPNVHLIVGLPNDQLT--HRLKGLTVMNDKERAEALRHCKWVDEVLENAPWVITPEFLEEHKIDFVAHDDIPYAS---DDSGDIYLPVKKVGKFIPTKRTEGVSTSDLITRIIRDYDQYVMRNLARGVNRKE 254
BLAST of FC923656 vs. ExPASy Swiss-Prot
Match: PCY1_CAEEL (Putative choline-phosphate cytidylyltransferase OS=Caenorhabditis elegans GN=F08C6.2 PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 6.871e-16 Identity = 47/156 (30.13%), Postives = 81/156 (51.92%), Query Frame = 2 Query: 164 VYIDGAFDLFHAGHVEILKKARQL--GDLLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIANHEAYMKRNAKKAVSEKK 625 +Y DG +DLFH GH L++ +++ L+VG+ D+ +++G + ER V CRYVDEV APW T + + + + H + G+ D YE + G+F E + ++T+ V RII +++ Y++RN ++ S K+ Sbjct: 83 IYADGIYDLFHHGHANQLRQVKKMFPNVYLIVGVCGDRDTHKYKG--RTVTSEEERYDGVRHCRYVDEVYREAPWFCTVEFLKNLKVDFIAHDAIPYV---APGEEDLYEKFRREGMFLETERTEGVSTSDVVCRIIRDYDKYVRRNLQRGYSPKE 233
BLAST of FC923656 vs. ExPASy Swiss-Prot
Match: ECT1_SCHPO (Probable ethanolamine-phosphate cytidylyltransferase OS=Schizosaccharomyces pombe GN=SPAC15E1.05c PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.172e-15 Identity = 43/137 (31.39%), Postives = 81/137 (59.12%), Query Frame = 2 Query: 164 VYIDGAFDLFHAGHVEILKKARQLGDLLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIAN 574 +++DG D FH GH + +A+QLG+ L++GI++D+ ++ ++G P+M L ER LS C++VDEV+ AP+ + + + VVHG + +T G D Y AK+ + ++ + ++TT + R++++ Sbjct: 11 LWLDGCMDFFHYGHSNAILQAKQLGETLVIGIHSDEEITLNKGP--PVMTLEERCLSANTCKWVDEVVPSAPYVFDLEWMRRYGCQYVVHG--DDISTDANG-DDCYRFAKAADQYLEVKRTEGVSTTELLDRLLSS 142
BLAST of FC923656 vs. ExPASy Swiss-Prot
Match: PCY1_YEAST (Choline-phosphate cytidylyltransferase OS=Saccharomyces cerevisiae GN=PCT1 PE=1 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 9.921e-15 Identity = 44/156 (28.21%), Postives = 83/156 (53.21%), Query Frame = 2 Query: 164 VYIDGAFDLFHAGHVEILKKARQL--GDLLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIANHEAYMKRNAKKAVSEKK 625 +Y DG FDLFH GH++ L++ ++ L+VG+ +D+I + +G ++ +R ++ CR+VDEV+ APW VT + + I V H + + D Y+ K MG F + ++T+ + +II +++ Y+ RN + + ++ Sbjct: 106 IYADGVFDLFHLGHMKQLEQCKKAFPNVTLIVGVPSDKITHKLKGL--TVLTDKQRCETLTHCRWVDEVVPNAPWCVTPEFLLEHKIDYVAHDDIPYVS---ADSDDIYKPIKEMGKFLTTQRTNGVSTSDIITKIIRDYDKYLMRNFARGATRQE 256
BLAST of FC923656 vs. ExPASy Swiss-Prot
Match: PCY1_PLAFK (Choline-phosphate cytidylyltransferase OS=Plasmodium falciparum (isolate K1 / Thailand) GN=CTP PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.431e-14 Identity = 50/178 (28.09%), Postives = 91/178 (51.12%), Query Frame = 2 Query: 137 KGPGPNAR--VVYIDGAFDLFHAGHVEILKKARQLGD--LLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNT-------PLTGQS--------DPYEVAKSMGIFQLLESPKSITTTSVAQRIIANHEAYMKRNAKKAV 613 KG N++ V+Y DG +D+ H GH++ L++A++L + L+VG+ +D +G + L ER+ ++ R+VDE+I PW VT + + + I V H + N G+S D Y K G F+ + + ++TT + RI+ N+E Y++R+ ++ + Sbjct: 83 KGSIKNSKNVVIYADGVYDMLHLGHMKQLEQAKKLFENTTLIVGVTSDNETKLFKGQV--VQTLEERTETLKHIRWVDEIISPCPWVVTPEFLEKYKIDYVAHDDIPYANNQKKKKKKKSKGKSFSFDEENEDIYAWLKRAGKFKATQRTEGVSTTDLIVRILKNYEDYIERSLQRGI 258 The following BLAST results are available for this feature:
BLAST of FC923656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923656 ID=FC923656; Name=FC923656; organism=Citrus clementina; type=EST; length=717bpback to top |