FC923657

Overview
NameFC923657
Unique NameFC923657
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923657 vs. ExPASy Swiss-Prot
Match: PLDA1_TOBAC (Phospholipase D alpha 1 OS=Nicotiana tabacum GN=PLD1 PE=2 SV=2)

HSP 1 Score: 235.343 bits (599), Expect = 2.488e-61
Identity = 120/250 (48.00%), Postives = 165/250 (66.00%), Query Frame = 2
Query:    2 VWHKVKLVRDA---SPALDCTLGELLRSKSQEGVRVLLLVWDDPTSRSILGYKMDGVMQTHDEETRRVFKHSSVKVLLCPRIAGKRHSWAKQKEVGTIYTHHQKTVIVDAD---AGYNRRKIIAFVGGLDLCDGRYDNPHHPLFRTLQTLHKDDYHNPTFTGN--TTGCPREPWHDLHSKIDGPAAYDVLTNFEERWRKAPKPHGIKKLKSGDDALLRIERIPGIIGISDAPSVRENDAESWHXQIFRSI 727
            V+ ++ LVRD+    P  D TLGELL+ K+ EGV+VL+LVWDD TS  +L  K DG+M THD+ET + F+ + V  +LCPR      S  +  ++GT++THHQK V+VD++       +R+I++FVGG+DLCDGRYD P H LFRTL T H DD+H P F     T G PREPWHD+HS+++GP A+DVL NFE+RWRK          + G D L+    +  II I  +P +  +D+E+W+ Q+FRSI
Sbjct:  232 VYTEITLVRDSRRQKPGGDITLGELLKKKASEGVKVLMLVWDDRTSVGLL--KKDGLMATHDQETEQFFQGTEVNCVLCPRNPDDGGSIVQSLQIGTMFTHHQKIVVVDSELPSGESEKRRILSFVGGIDLCDGRYDTPFHSLFRTLDTAHHDDFHQPNFPDGAITKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWRK----------QGGKDVLVNFRELDDII-IPPSPVMHLDDSETWNVQLFRSI 468          
BLAST of FC923657 vs. ExPASy Swiss-Prot
Match: PLDA2_BRAOC (Phospholipase D alpha 2 OS=Brassica oleracea var. capitata GN=PLD2 PE=1 SV=2)

HSP 1 Score: 232.646 bits (592), Expect = 1.612e-60
Identity = 122/252 (48.41%), Postives = 163/252 (64.68%), Query Frame = 2
Query:    2 VWHKVKLVRDA---SPALDCTLGELLRSKSQEGVRVLLLVWDDPTSRSILGYKMDGVMQTHDEETRRVFKHSSVKVLLCPRIAGKRHSWAKQKEVGTIYTHHQKTVIVDADA-----GYNRRKIIAFVGGLDLCDGRYDNPHHPLFRTLQTLHKDDYHNPTFTGN--TTGCPREPWHDLHSKIDGPAAYDVLTNFEERWRKAPKPHGIKKLKSGDDALLRIERIPGIIGISDAPSVRENDAESWHXQIFRSI 727
            V+ ++ LVRD+    P  D TLGELL+ K+ EGVRVLLLVWDD TS  +L  K DG+M THDE+T   F  S V  +LCPR      S  +  +V  ++THHQK V+VD++      G   R+I++FVGG+DLCDGRYD P H LFRTL T+H DD+H P FTG   T G PREPW D+HS+++GP A+DVL NFE+RW K          + G D L+++  +  II I+ +P + + D + W+ Q+FRSI
Sbjct:  234 VYTEITLVRDSRRPKPGGDMTLGELLKKKATEGVRVLLLVWDDRTSVDVL--KKDGLMATHDEDTENYFNGSEVHCVLCPRNPDDGGSIVQNLQVSAMFTHHQKIVVVDSEVPSQGGGSEMRRIMSFVGGIDLCDGRYDTPFHSLFRTLDTVHHDDFHQPNFTGASITKGGPREPWQDIHSRLEGPIAWDVLYNFEQRWSK----------QGGKDILVKLRELSDII-ITPSPVMFQEDHDVWNVQLFRSI 472          
BLAST of FC923657 vs. ExPASy Swiss-Prot
Match: PLDA1_VIGUN (Phospholipase D alpha 1 OS=Vigna unguiculata GN=PLD1 PE=2 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 1.045e-59
Identity = 119/251 (47.41%), Postives = 162/251 (64.54%), Query Frame = 2
Query:    2 VWHKVKLVRDA---SPALDCTLGELLRSKSQEGVRVLLLVWDDPTSRSILGYKMDGVMQTHDEETRRVFKHSSVKVLLCPRIAGKRHSWAKQKEVGTIYTHHQKTVIVDA----DAGYNRRKIIAFVGGLDLCDGRYDNPHHPLFRTLQTLHKDDYHNPTFTGN--TTGCPREPWHDLHSKIDGPAAYDVLTNFEERWRKAPKPHGIKKLKSGDDALLRIERIPGIIGISDAPSVRENDAESWHXQIFRSI 727
            V+ ++ L+RD+       D T+GELL+ K+ EGVRVL+LVWDD TS  +L  K DG+M THDEET + F+ + V  +LCPR      S  +  ++ T++THHQK V+VD+      G ++R+I++FVGGLDLCDGRYD   H LFRTL T H DD+H P F G   T G PREPWHD+HS+++GP A+DVL NFE+RWRK          + G D L  +  +  +I I  +P    +D E+W+ Q+FRSI
Sbjct:  232 VYTEISLIRDSRRPKAGGDQTIGELLKKKASEGVRVLMLVWDDRTSVGLL--KKDGLMATHDEETEQFFRDTDVHCVLCPRNPDDGGSIVQDLQISTMFTHHQKIVVVDSALPGGGGSDKRRIVSFVGGLDLCDGRYDTAFHSLFRTLDTAHHDDFHQPNFPGAAITKGGPREPWHDIHSRVEGPIAWDVLFNFEQRWRK----------QGGKDILAPLRELEDVI-IPPSPVTFPDDHETWNVQLFRSI 469          
BLAST of FC923657 vs. ExPASy Swiss-Prot
Match: PLDA1_ORYSJ (Phospholipase D alpha 1 OS=Oryza sativa subsp. japonica GN=PLD1 PE=1 SV=2)

HSP 1 Score: 229.565 bits (584), Expect = 1.365e-59
Identity = 121/250 (48.40%), Postives = 161/250 (64.40%), Query Frame = 2
Query:    2 VWHKVKLVRDAS---PALDCTLGELLRSKSQEGVRVLLLVWDDPTSRSILGYKMDGVMQTHDEETRRVFKHSSVKVLLCPRIAGKRHSWAKQKEVGTIYTHHQKTVIVDADA---GYNRRKIIAFVGGLDLCDGRYDNPHHPLFRTLQTLHKDDYHNPTFTGNT--TGCPREPWHDLHSKIDGPAAYDVLTNFEERWRKAPKPHGIKKLKSGDDALLRIERIPGIIGISDAPSVRENDAESWHXQIFRSI 727
            V+ ++ LVRD++   P  D TLGELL+ K+ EGVRVL+LVWDD TS  +L  K DG+M THDEET   F  S V  +LCPR      S  +   + T++THHQK V+VD +    G  +R+I++FVGGLDLCDGRYD  +H LFRTL + H DD+H P F   +   G PREPWHD+HS+++GP A+DVL NFE+RWRK          + G D LL++  +   I I  +P +   D E+W+ Q+FRSI
Sbjct:  236 VYTEITLVRDSNRPKPGGDVTLGELLKKKASEGVRVLMLVWDDRTSVGLL--KRDGLMATHDEETENYFHGSDVNCVLCPRNPDDSGSIVQDLSISTMFTHHQKIVVVDHELPNQGSQQRRIVSFVGGLDLCDGRYDTQYHSLFRTLDSTHHDDFHQPNFATASIKKGGPREPWHDIHSRLEGPIAWDVLYNFEQRWRK----------QGGKDLLLQLRDLSDTI-IPPSPVMFPEDRETWNVQLFRSI 472          
BLAST of FC923657 vs. ExPASy Swiss-Prot
Match: PLDA2_ARATH (Phospholipase D alpha 2 OS=Arabidopsis thaliana GN=PLDALPHA2 PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.783e-59
Identity = 118/250 (47.20%), Postives = 161/250 (64.40%), Query Frame = 2
Query:    2 VWHKVKLVRDA---SPALDCTLGELLRSKSQEGVRVLLLVWDDPTSRSILGYKMDGVMQTHDEETRRVFKHSSVKVLLCPRIAGKRHSWAKQKEVGTIYTHHQKTVIVDAD---AGYNRRKIIAFVGGLDLCDGRYDNPHHPLFRTLQTLHKDDYHNPTFTGN--TTGCPREPWHDLHSKIDGPAAYDVLTNFEERWRKAPKPHGIKKLKSGDDALLRIERIPGIIGISDAPSVRENDAESWHXQIFRSI 727
            V+ ++ LVRD+       D T+GELL+ K+ EGV+V+LLVWDD TS  +L  K DG+M THDEET   F+ + V  +LCPR      S  +  ++ T++THHQK V+VD++    G   R+I++FVGGLDLCDGRYD P H LFRTL T H DD+H P FTG   T G PREPWHD+H +++GP A+DVL NFE+RW +          + G D L+++  +  II I  +P +   D + W+ Q+FRSI
Sbjct:  233 VYTEISLVRDSRRPKQGGDVTVGELLKKKASEGVKVILLVWDDRTSVDLL--KKDGLMATHDEETENFFRGTDVNCILCPRNPDDGGSIVQNLQISTMFTHHQKIVVVDSEMPSGGSRSRRIVSFVGGLDLCDGRYDTPFHSLFRTLDTAHHDDFHQPNFTGAAITKGGPREPWHDIHCRLEGPIAWDVLYNFEQRWSR----------QGGKDILVKMRELGDII-IPPSPVLFSEDHDVWNVQLFRSI 469          
BLAST of FC923657 vs. ExPASy Swiss-Prot
Match: PLDA1_PIMBR (Phospholipase D alpha 1 OS=Pimpinella brachycarpa GN=PLD1 PE=2 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.328e-59
Identity = 119/250 (47.60%), Postives = 159/250 (63.60%), Query Frame = 2
Query:    2 VWHKVKLVRDA---SPALDCTLGELLRSKSQEGVRVLLLVWDDPTSRSILGYKMDGVMQTHDEETRRVFKHSSVKVLLCPRIAGKRHSWAKQKEVGTIYTHHQKTVIVDAD---AGYNRRKIIAFVGGLDLCDGRYDNPHHPLFRTLQTLHKDDYHNPTFTGN--TTGCPREPWHDLHSKIDGPAAYDVLTNFEERWRKAPKPHGIKKLKSGDDALLRIERIPGIIGISDAPSVRENDAESWHXQIFRSI 727
            V+ +  L+RD     P  D  LGELL+ K+ EGVRVL+LVWDD TS  +L  K DG+M THD+ET   F+ S+V  +LC R         +   + TI+THHQK V+VD++   +G   R++++FVGG+DLCDGRYD P H LFRTL T H DD+H P F G   T G PREPWHD+HS+++GP A+DVL NFE+RWRK          + G D LL +  +  +I I  +P    +D E+W+ Q+FRSI
Sbjct:  232 VYTEFALIRDTRRPKPGGDIMLGELLKKKADEGVRVLMLVWDDRTSVGLL--KKDGLMATHDQETEEYFRDSNVHCVLCLRNPDDGGGIIQGLTISTIFTHHQKIVVVDSEMPTSGSENRRVVSFVGGIDLCDGRYDTPFHSLFRTLDTAHHDDFHQPNFEGAAITKGGPREPWHDIHSRLEGPVAWDVLFNFEQRWRK----------QGGKDILLNLRELQDVI-IPPSPVTFPDDDETWNVQLFRSI 468          
BLAST of FC923657 vs. ExPASy Swiss-Prot
Match: PLDA2_ORYSJ (Phospholipase D alpha 2 OS=Oryza sativa subsp. japonica GN=PLD2 PE=2 SV=2)

HSP 1 Score: 225.328 bits (573), Expect = 2.574e-58
Identity = 126/252 (50.00%), Postives = 158/252 (62.70%), Query Frame = 2
Query:    2 VWHKVKLVRDAS---PALDCTLGELLRSKSQEGVRVLLLVWDDPTSRSILGYKMDGVMQTHDEETRRVFKHSSVKVLLCPRIAGKRHSWAKQKEVGTIYTHHQKTVIVDADA----GYNRRKIIAFVGGLDLCDGRYDNPHHPLFRTLQTLHKDDYHNPTFTGN--TTGCPREPWHDLHSKIDGPAAYDVLTNFEERWRKAPKPHGIKKLKSGD-DALLRIERIPGIIGISDAPSVRENDAESWHXQIFRSI 727
            V+ ++ L+RD +   P  D TLGELL+ K+ EGVRVLLLVWDD TS   LG K  G M THD ET   F+ + V+ +LCPR      S     ++  + THHQKTVIVD D     G   R+I++FVGGLDLCDGRYD   H LFRTL T H  D+H P   G   T G PREPWHD+HSKI+GPAA+DVL NFE+RWRK          + GD D LL ++ +  +I I  +P +  +D E+W  Q+FRSI
Sbjct:  238 VYTEITLIRDGTRQRPGGDATLGELLKRKASEGVRVLLLVWDDRTSVESLGMKW-GFMSTHDAETADYFRGTDVRCVLCPRNPDAGRSAIMGAQIAYMITHHQKTVIVDHDMPVPRGGGSRRIVSFVGGLDLCDGRYDTQFHSLFRTLDTAHHSDFHQPNLDGAAVTKGGPREPWHDIHSKIEGPAAWDVLYNFEQRWRK----------QGGDKDLLLDLKAMADLI-IPPSPVMFPDDGEAWSVQLFRSI 477          
BLAST of FC923657 vs. ExPASy Swiss-Prot
Match: PLDZ1_ARATH (Phospholipase D zeta OS=Arabidopsis thaliana GN=PLDZETA PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 4.855e-57
Identity = 115/245 (46.94%), Postives = 157/245 (64.08%), Query Frame = 2
Query:   14 VKLVRDAS---PALDCTLGELLRSKSQEGVRVLLLVWDDPTSRSILGYKMDGVMQTHDEETRRVFKHSSVKVLLCPRIAGKRHSWAKQKEVGTIYTHHQKTVIVDA--DAGYNRRKIIAFVGGLDLCDGRYDNPHHPLFRTLQTLHKDDYHNPTFTGNT--TGCPREPWHDLHSKIDGPAAYDVLTNFEERWRKAPKPHGIKKLKSGDDALLRIERIPGIIGISDAPSVRENDAESWHXQIFRSI 727
            V LVRD     P  D  LGELL+ K++E V VL+LVWDD TS  +  +K DG+M THD+ET   FK++ V+ +LCPR      S  +  EV T++THHQKT++VD+  D    +R+I++F+GG+DLCDGRYD   HPLF TL ++H +D+H P F G +   G PREPWHD+H K+DGPAA+DVL NFE+RW K           SG   L+ + ++  I  +   P V+ ++ E W  Q+FRSI
Sbjct:  244 VTLVRDPKRTRPGGDLKLGELLKKKAEENVTVLMLVWDDRTSHEV--FKRDGLMMTHDQETYDYFKNTKVRCVLCPRNPDNGDSIVQGFEVATMFTHHQKTIVVDSEVDGSLTKRRIVSFLGGIDLCDGRYDTVEHPLFGTLNSVHANDFHQPNFDGASIKKGGPREPWHDIHCKLDGPAAWDVLYNFEQRWMKQ---------GSGRRYLISMAQLAEIT-VPPLPIVQPDNEEGWTVQVFRSI 476          
BLAST of FC923657 vs. ExPASy Swiss-Prot
Match: PLDE1_ARATH (Phospholipase D epsilon OS=Arabidopsis thaliana GN=PLDEPSILON PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.519e-37
Identity = 92/245 (37.55%), Postives = 134/245 (54.69%), Query Frame = 2
Query:   20 LVRDASP----ALDCTLGELLRSKSQEGVRVLLLVWDDPTSRSILGYKMDGVMQTHDEETRRVFKHSSVKVLLCPRIAGKRHSWAKQKEVGTIYTHHQKTVIVDA---DAGYNRRKIIAFVGGLDLCDGRYDNPHHPLFRTLQTLHKDDYHNPTFTGN--TTGCPREPWHDLHSKIDGPAAYDVLTNFEERWRKAPKPHGIKKLKSGDDALLRIERIPGIIGISDAPSVRENDAESWHXQIFRSI 727
            LVRD       A+  T+GELL+ KS+EGV V +++W+D TS  ++  K  GVM+T+ E     F++++V   LCPR+          K++ T + HHQKT+ +D    ++    R+I++F+GG DLCDGRYD   H LFRTL T  + D++  +  G   + G PREPWHD H  + G AA+DVL NFE+RW K   P  +                 GI  + +     E +   W+ Q+ RSI
Sbjct:  221 LVRDNETEIPHAVGVTVGELLKRKSEEGVAVRVMLWNDETSLPMI--KNKGVMRTNVERALAYFRNTNVVCRLCPRL---------HKKLPTAFAHHQKTITLDTRVTNSSTKEREIMSFLGGFDLCDGRYDTEEHSLFRTLGT--EADFYQTSVAGAKLSRGGPREPWHDCHVSVVGGAAWDVLKNFEQRWTKQCNPSVLVNTS-------------GIRNLVNLTGPTEENNRKWNVQVLRSI 439          
BLAST of FC923657 vs. ExPASy Swiss-Prot
Match: PLDC_DICDI (Phospholipase D C OS=Dictyostelium discoideum GN=pldC PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.415e-17
Identity = 62/185 (33.51%), Postives = 89/185 (48.11%), Query Frame = 2
Query:   56 LGELLRSKSQEGVRVLLLVWDDPTSRSILGYKMDGVMQTHDEETRRVFKHSSVKVLLCPRIAGKRHSWAKQKEVGTIYTHHQKTVIVDADAGYNRRKIIAFVGGLDLCDGRYDNPHHPLFRTLQ-TLHKDDYHNPTFT---GNTTGC-------PREPWHDLHSKIDGPAAYDVLTNFEERWRKA 577
            L  +L  K+ EGV++ +L+WD+      LG +  GV    ++  RR     ++KV+  P +            +   ++HHQK V+VD        + IAF+GGLDLC GRYDN ++ +   L+      DY N        N   C       PR PWHD+   +DG AA DV  NF +RW  A
Sbjct:  953 LDSVLMKKASEGVKIYILIWDETMIAMDLGSR--GVKSFFEKMHRR-----NIKVIRHPHM------------LPLYWSHHQKVVVVD--------QRIAFIGGLDLCFGRYDNEYYFVKDNLEINFPGADYINSCIAKPVNNLKDCLVDRNTQPRMPWHDVSISLDGKAARDVTYNFIQRWNHA 1110          
The following BLAST results are available for this feature:
BLAST of FC923657 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
PLDA1_TOBAC2.488e-6148.00Phospholipase D alpha 1 OS=Nicotiana tabacum GN=PL... [more]
PLDA2_BRAOC1.612e-6048.41Phospholipase D alpha 2 OS=Brassica oleracea var. ... [more]
PLDA1_VIGUN1.045e-5947.41Phospholipase D alpha 1 OS=Vigna unguiculata GN=PL... [more]
PLDA1_ORYSJ1.365e-5948.40Phospholipase D alpha 1 OS=Oryza sativa subsp. jap... [more]
PLDA2_ARATH1.783e-5947.20Phospholipase D alpha 2 OS=Arabidopsis thaliana GN... [more]
PLDA1_PIMBR2.328e-5947.60Phospholipase D alpha 1 OS=Pimpinella brachycarpa ... [more]
PLDA2_ORYSJ2.574e-5850.00Phospholipase D alpha 2 OS=Oryza sativa subsp. jap... [more]
PLDZ1_ARATH4.855e-5746.94Phospholipase D zeta OS=Arabidopsis thaliana GN=PL... [more]
PLDE1_ARATH9.519e-3737.55Phospholipase D epsilon OS=Arabidopsis thaliana GN... [more]
PLDC_DICDI6.415e-1733.51Phospholipase D C OS=Dictyostelium discoideum GN=p... [more]

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Properties
Property NameValue
Genbank descriptionC31707E10EF StrClemenN Citrus clementina cDNA clone C31707E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923657 ID=FC923657; Name=FC923657; organism=Citrus clementina; type=EST; length=727bp
GGTTTGGCACAAAGTTAAACTGGTTCGGGATGCGAGTCCTGCATTAGATT
GCACCCTTGGGGAACTTCTAAGATCAAAGTCCCAGGAAGGAGTGAGAGTG
CTGCTTCTTGTTTGGGATGACCCTACTTCGAGGAGTATTTTGGGTTATAA
AATGGATGGAGTTATGCAAACCCATGATGAGGAAACACGTCGTGTTTTCA
AGCACTCGTCTGTGAAGGTGCTACTTTGTCCCCGCATTGCTGGAAAACGA
CATAGTTGGGCCAAACAAAAGGAAGTTGGAACAATCTACACGCACCATCA
GAAAACAGTAATTGTAGATGCTGATGCTGGTTATAATAGAAGGAAAATCA
TTGCTTTTGTTGGTGGCCTTGATTTATGTGATGGGCGATACGATAATCCA
CATCATCCTCTTTTTAGGACATTACAGACACTGCATAAGGACGACTATCA
CAATCCTACTTTCACGGGTAATACTACTGGTTGCCCACGAGAACCATGGC
ATGACTTGCATTCAAAAATTGATGGTCCAGCAGCATATGACGTTTTAACG
AACTTTGAGGAGCGTTGGCGAAAGGCTCCAAAACCTCACGGGATTAAGAA
ACTGAAGTCTGGGGATGATGCTTTGCTTAGGATAGAAAGAATTCCAGGCA
TTATAGGCATCTCTGATGCTCCTTCTGTTAGAGAGAATGATGCTGAATCT
TGGCATGNTCAGATTTTTCGTTCAATT
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