FC923733

Overview
NameFC923733
Unique NameFC923733
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length554
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923733 vs. ExPASy Swiss-Prot
Match: ASNS_SANAU (Asparagine synthetase [glutamine-hydrolyzing] OS=Sandersonia aurantiaca GN=AND1 PE=2 SV=3)

HSP 1 Score: 280.796 bits (717), Expect = 3.035e-75
Identity = 127/148 (85.81%), Postives = 137/148 (92.57%), Query Frame = 1
Query:    1 KEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQ 444
            KEE H ETCHKIKALHQYDCLRANK+TSAWGLEARVPFLDK+F+NVAM+IDPEWKMI P  GRIEKWILR+AFDDEE PYLPKH+LYRQKEQFSDGVGYSWIDGLKAH+  HVTDKM+ NA +I+PHNTP TKEAYYYRMIFERFFPQ
Sbjct:  361 KEELHLETCHKIKALHQYDCLRANKATSAWGLEARVPFLDKEFVNVAMSIDPEWKMIKPDIGRIEKWILRRAFDDEENPYLPKHILYRQKEQFSDGVGYSWIDGLKAHSALHVTDKMMLNAAHIYPHNTPTTKEAYYYRMIFERFFPQ 508          
BLAST of FC923733 vs. ExPASy Swiss-Prot
Match: ASNB_ECOLI (Asparagine synthetase B [glutamine-hydrolyzing] OS=Escherichia coli (strain K12) GN=asnB PE=1 SV=3)

HSP 1 Score: 205.682 bits (522), Expect = 1.241e-52
Identity = 103/171 (60.23%), Postives = 126/171 (73.68%), Query Frame = 1
Query:    4 EEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGVSVACSTAKAVEWD 516
            +E H ET  K+ ALH YDC RANK+ SAWG+EARVPFLDK F++VAM I+P+ KM     G++EK ILR+ F+     YLP  V +RQKEQFSDGVGYSWID LK  A Q V+D+ ++ A++ FP+NTP +KEAY YR IFE  FP  SA   VPGG SVACS+AKA+EWD
Sbjct:  368 KELHEETVRKLLALHMYDCARANKAMSAWGVEARVPFLDKKFLDVAMRINPQDKMCG--NGKMEKHILRECFE----AYLPASVAWRQKEQFSDGVGYSWIDTLKEVAAQQVSDQQLETARFRFPYNTPTSKEAYLYREIFEELFPLPSAAECVPGGPSVACSSAKAIEWD 532          
BLAST of FC923733 vs. ExPASy Swiss-Prot
Match: ASNS2_YEAST (Asparagine synthetase [glutamine-hydrolyzing] 2 OS=Saccharomyces cerevisiae GN=ASN2 PE=1 SV=2)

HSP 1 Score: 195.282 bits (495), Expect = 1.677e-49
Identity = 95/157 (60.51%), Postives = 119/157 (75.80%), Query Frame = 1
Query:    7 EFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEE----RPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTV 465
            EFH E+  ++K LH  DCLRANKST AWGLEARVPFLDKDF+ + M IDP  KMI P+EGRIEK+ILRKAFD  +    +PYLP+ +L+RQKEQFSDGVGYSWIDGL+  AE+ ++D M  N +  +  + P TKEAY+YR+ F+ +FPQ +A  TV
Sbjct:  387 EFHTESVQRVKNLHLADCLRANKSTMAWGLEARVPFLDKDFLQLCMNIDPNEKMIKPKEGRIEKYILRKAFDTTDEPDVKPYLPEEILWRQKEQFSDGVGYSWIDGLRDTAERAISDAMFANPKADWGDDIPTTKEAYWYRLKFDAWFPQKTAADTV 543          
BLAST of FC923733 vs. ExPASy Swiss-Prot
Match: ASNS_DICDI (Probable asparagine synthetase [glutamine-hydrolyzing] OS=Dictyostelium discoideum GN=asns PE=1 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 2.677e-47
Identity = 92/157 (58.60%), Postives = 116/157 (73.89%), Query Frame = 1
Query:    7 EFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEG--RIEKWILRKAFDDEE--RPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTV 465
            EFH E C +IKALH +DCLRANKST+AWG+E RVPFLD+ F++VAM IDP  K+ +  +G  R+EK+ILRKAF+ +E  +PYLP  VL+RQKEQFSDGVGYSWIDGLK +AE  V+D+     +  FP +TP TKEA+ YR +FE  +P      TV
Sbjct:  375 EFHVECCRRIKALHSFDCLRANKSTAAWGVEVRVPFLDQRFLDVAMNIDPSHKVCHDDQGKKRMEKYILRKAFETKEGEKPYLPSSVLWRQKEQFSDGVGYSWIDGLKENAENEVSDEEFAKRESYFPDDTPTTKEAFLYRKMFEAIYPGKECMETV 531          
BLAST of FC923733 vs. ExPASy Swiss-Prot
Match: ASNS1_YEAST (Asparagine synthetase [glutamine-hydrolyzing] 1 OS=Saccharomyces cerevisiae GN=ASN1 PE=1 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 2.677e-47
Identity = 91/157 (57.96%), Postives = 117/157 (74.52%), Query Frame = 1
Query:    7 EFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFD----DEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTV 465
            EFH E+  ++K LH  DCLRANKST AWGLEARVPFLD++F+ + M IDP  KMI P+EGRIEK+ILRKAFD     + +PYLP+ +L+RQKEQFSDGVGYSWIDGLK  AE  ++D+M  + +  +  + P TKEA++YR+ F+  FPQ +   TV
Sbjct:  388 EFHTESVQRVKNLHLADCLRANKSTMAWGLEARVPFLDREFLQLCMNIDPNEKMIKPKEGRIEKYILRKAFDTTGEPDAKPYLPEEILWRQKEQFSDGVGYSWIDGLKDTAEAVISDEMFASPKAEWGSDIPTTKEAFWYRLKFDALFPQKTVADTV 544          
BLAST of FC923733 vs. ExPASy Swiss-Prot
Match: ASNS_SCHPO (Probable asparagine synthetase [glutamine-hydrolyzing] OS=Schizosaccharomyces pombe GN=SPBC119.10 PE=1 SV=3)

HSP 1 Score: 167.933 bits (424), Expect = 2.867e-41
Identity = 89/156 (57.05%), Postives = 109/156 (69.87%), Query Frame = 1
Query:    1 KEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKM-INPQEGRIEKWILRKAFDDEE----RPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSA 453
            +E FH E   ++K LH  DCLRANKST AWGLEARVPFLDKDF+ VA+ IDPE KM IN   GR EK+ILRKAFD       +PYLP+ +L+RQKEQFSDGVGYSWID LK  AE  ++D      +  +  + P TKEA++YR +F+  FP+  A
Sbjct:  374 REAFHSECVRRVKNLHLSDCLRANKSTMAWGLEARVPFLDKDFLEVALNIDPEEKMYIN---GRKEKYILRKAFDTTHDSSLQPYLPQDILWRQKEQFSDGVGYSWIDALKDTAELCISDDEFALPRREWGDDIPTTKEAFWYRKLFDEIFPRQCA 526          
BLAST of FC923733 vs. ExPASy Swiss-Prot
Match: ASNS_CRIGR (Asparagine synthetase [glutamine-hydrolyzing] OS=Cricetulus griseus GN=ASNS PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 2.356e-27
Identity = 70/156 (44.87%), Postives = 97/156 (62.18%), Query Frame = 1
Query:    4 EEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDG---VGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLT 462
            E+   E+   +K L+ +D LRA+++T+A GLE RVPFLD  F +  +++ PE ++  P+ G IEK +LR+ F+D     LPK +L+R KE FSDG   V  SW   L+ + E  V D+M+  A   FP NTP TKE YYYR IFER +P  +  LT
Sbjct:  384 EKAEEESERLLKELYLFDVLRADRTTAAHGLELRVPFLDHRFSSYYLSLPPEMRI--PKNG-IEKHLLRETFEDSN--LLPKEILWRPKEAFSDGITSVKNSWFKILQDYVEHQVDDEMMATAAQKFPFNTPKTKEGYYYRQIFERHYPGRADWLT 534          
BLAST of FC923733 vs. ExPASy Swiss-Prot
Match: ASNS_PONAB (Asparagine synthetase [glutamine-hydrolyzing] OS=Pongo abelii GN=ASNS PE=2 SV=3)

HSP 1 Score: 120.168 bits (300), Expect = 6.856e-27
Identity = 66/149 (44.30%), Postives = 94/149 (63.09%), Query Frame = 1
Query:    4 EEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDG---VGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFP 441
            E+   E+   ++ L+ +D LRA+++T+A GLE RVPFLD  F +  +++ PE ++  P+ G IEK +LR+ F+D     +PK +L+R KE FSDG   V  SW   L+ + E  V D M+ NA   FP NTP TKE YYYR +FER +P
Sbjct:  384 EKAEEESERLLRELYLFDVLRADRTTAAHGLELRVPFLDHRFSSYYLSLPPEMRI--PKNG-IEKHLLRETFEDSN--LIPKEILWRPKEAFSDGITSVKNSWFKILQEYVEHQVDDAMMANAAQKFPFNTPKTKEGYYYRQVFERHYP 527          
BLAST of FC923733 vs. ExPASy Swiss-Prot
Match: ASNS_HUMAN (Asparagine synthetase [glutamine-hydrolyzing] OS=Homo sapiens GN=ASNS PE=1 SV=4)

HSP 1 Score: 120.168 bits (300), Expect = 6.856e-27
Identity = 66/149 (44.30%), Postives = 94/149 (63.09%), Query Frame = 1
Query:    4 EEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDG---VGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFP 441
            E+   E+   ++ L+ +D LRA+++T+A GLE RVPFLD  F +  +++ PE ++  P+ G IEK +LR+ F+D     +PK +L+R KE FSDG   V  SW   L+ + E  V D M+ NA   FP NTP TKE YYYR +FER +P
Sbjct:  384 EKAEEESERLLRELYLFDVLRADRTTAAHGLELRVPFLDHRFSSYYLSLPPEMRI--PKNG-IEKHLLRETFEDSN--LIPKEILWRPKEAFSDGITSVKNSWFKILQEYVEHQVDDAMMANAAQKFPFNTPKTKEGYYYRQVFERHYP 527          
BLAST of FC923733 vs. ExPASy Swiss-Prot
Match: ASNS_RAT (Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus GN=Asns PE=2 SV=3)

HSP 1 Score: 119.398 bits (298), Expect = 1.169e-26
Identity = 69/156 (44.23%), Postives = 95/156 (60.90%), Query Frame = 1
Query:    4 EEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDG---VGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLT 462
            E+   E+   +K L+ +D LRA+++T+A GLE RVPFLD  F +  +++ PE ++  P++G IEK +LR+ F+D     LPK +L+R KE FSDG   V  SW   L+   E  V D M+  A   FP NTP TKE YYYR IFE  +P  +  LT
Sbjct:  384 EKAEEESERLLKELYLFDVLRADRTTAAHGLELRVPFLDHRFSSYYLSLPPEMRI--PKDG-IEKHLLRETFEDSN--LLPKEILWRPKEAFSDGITSVKNSWFKILQDFVEHQVDDAMMSEASQKFPFNTPQTKEGYYYRQIFEHHYPGRADWLT 534          
The following BLAST results are available for this feature:
BLAST of FC923733 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
ASNS_SANAU3.035e-7585.81Asparagine synthetase [glutamine-hydrolyzing] OS=S... [more]
ASNB_ECOLI1.241e-5260.23Asparagine synthetase B [glutamine-hydrolyzing] OS... [more]
ASNS2_YEAST1.677e-4960.51Asparagine synthetase [glutamine-hydrolyzing] 2 OS... [more]
ASNS_DICDI2.677e-4758.60Probable asparagine synthetase [glutamine-hydrolyz... [more]
ASNS1_YEAST2.677e-4757.96Asparagine synthetase [glutamine-hydrolyzing] 1 OS... [more]
ASNS_SCHPO2.867e-4157.05Probable asparagine synthetase [glutamine-hydrolyz... [more]
ASNS_CRIGR2.356e-2744.87Asparagine synthetase [glutamine-hydrolyzing] OS=C... [more]
ASNS_PONAB6.856e-2744.30Asparagine synthetase [glutamine-hydrolyzing] OS=P... [more]
ASNS_HUMAN6.856e-2744.30Asparagine synthetase [glutamine-hydrolyzing] OS=H... [more]
ASNS_RAT1.169e-2644.23Asparagine synthetase [glutamine-hydrolyzing] OS=R... [more]

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Properties
Property NameValue
Genbank descriptionC31708D03EF StrClemenN Citrus clementina cDNA clone C31708D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923733 ID=FC923733; Name=FC923733; organism=Citrus clementina; type=EST; length=554bp
AAGGAAGAATTCCACCGCGAAACATGTCACAAGATAAAGGCTCTCCACCA
GTATGATTGCTTGAGAGCTAACAAATCAACATCTGCTTGGGGTCTAGAAG
CACGAGTCCCCTTCCTTGACAAAGATTTTATTAATGTAGCAATGGCCATT
GATCCTGAGTGGAAGATGATTAATCCTCAAGAAGGACGTATCGAGAAGTG
GATCCTTAGGAAGGCCTTCGATGATGAGGAGCGACCTTATCTGCCAAAGC
ATGTTCTGTACAGACAGAAGGAACAATTCAGTGATGGTGTTGGCTATAGT
TGGATTGATGGCCTCAAAGCACATGCTGAACAACATGTGACTGATAAAAT
GGTGCAAAATGCTCAATACATCTTCCCACACAACACACCTTTGACTAAAG
AAGCCTACTACTACAGAATGATTTTCGAGAGGTTCTTTCCACAGAATTCA
GCCAGGCTAACTGTCCCAGGAGGTGTGAGTGTAGCATGCAGCACGGCTAA
AGCTGTCGAATGGGATGCTGAGTGGGCAAATATCTTGATCCTTCTGGGAG
GGCT
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