FC923733

Overview
NameFC923733
Unique NameFC923733
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length554
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923733 vs. ExPASy Swiss-Prot
Match: ASNS_MOUSE (Asparagine synthetase [glutamine-hydrolyzing] OS=Mus musculus GN=Asns PE=2 SV=3)

HSP 1 Score: 117.472 bits (293), Expect = 4.444e-26
Identity = 68/156 (43.59%), Postives = 97/156 (62.18%), Query Frame = 1
Query:    4 EEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDG---VGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLT 462
            E+   E+   +K L+ +D LRA+++T+A GLE RVPFLD  F +  +++ P+ ++  P+ G IEK +LR+ F+D     LPK +L+R KE FSDG   V  SW   L+ + E  V D+M+  A   FP NTP TKE Y+YR IFER +P  +  LT
Sbjct:  384 EKAEEESERLLKELYLFDVLRADRTTAAHGLELRVPFLDHRFSSYYLSLPPDMRI--PKNG-IEKHLLRETFEDCN--LLPKEILWRPKEAFSDGITSVKNSWFKILQDYVEHQVDDEMMSAASQKFPFNTPKTKEGYFYRQIFERHYPGRADWLT 534          
BLAST of FC923733 vs. ExPASy Swiss-Prot
Match: ASNS_MESAU (Asparagine synthetase [glutamine-hydrolyzing] OS=Mesocricetus auratus GN=ASNS PE=1 SV=3)

HSP 1 Score: 117.472 bits (293), Expect = 4.444e-26
Identity = 68/156 (43.59%), Postives = 95/156 (60.90%), Query Frame = 1
Query:    4 EEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDG---VGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLT 462
            E+   E+   +K L+ +D LRA+++T+A GLE RVPFLD  F +  +++ PE ++  P+ G IEK +LR+ F+D     LPK +L+R KE FSDG   V  SW   L+ + E  V D M+  A   FP NTP TKE Y+YR IFE  +P  +  LT
Sbjct:  384 EKAEEESERLLKELYLFDVLRADRTTAAHGLELRVPFLDHRFSSYYLSLPPEMRV--PKNG-IEKHLLRETFEDSN--LLPKEILWRPKEAFSDGITSVKNSWFKILQDYVEHQVDDAMMATAAQKFPFNTPKTKEGYFYRQIFEHHYPGRADWLT 534          
BLAST of FC923733 vs. ExPASy Swiss-Prot
Match: ASNS_CHICK (Asparagine synthetase [glutamine-hydrolyzing] OS=Gallus gallus GN=ASNS PE=2 SV=3)

HSP 1 Score: 117.087 bits (292), Expect = 5.804e-26
Identity = 65/155 (41.94%), Postives = 99/155 (63.87%), Query Frame = 1
Query:    4 EEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGY---SWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARL 459
            EE   E+   +K L+ +D LRA+++T+A GLE RVPFLD  F +  +++  E ++  P+ G IEK++LR++F+D     LPK +L+R KE FSDG+     SW   L+ + +Q V D +++ A   +P N P TKE+YYYR IFE+ +P  S+ L
Sbjct:  384 EEAAEESERLLKELYLFDVLRADRTTAAHGLELRVPFLDHRFTSYYLSLPAELRI--PKNG-IEKYLLRQSFEDSN--LLPKEILWRPKEAFSDGIASVKKSWFSILQDYIDQQVDDLLLEKAAEKYPFNPPRTKESYYYRQIFEKHYPGRSSWL 533          
BLAST of FC923733 vs. ExPASy Swiss-Prot
Match: ASNS_BOVIN (Asparagine synthetase [glutamine-hydrolyzing] OS=Bos taurus GN=ASNS PE=2 SV=3)

HSP 1 Score: 111.309 bits (277), Expect = 3.185e-24
Identity = 63/149 (42.28%), Postives = 92/149 (61.74%), Query Frame = 1
Query:    4 EEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDG---VGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFP 441
            E+   E+   ++ L+ +D LRA+++T+A GLE RVPFLD  F +  +++ P+ ++  P+ G IEK +LR+ F+D     +PK +L+R KE FSDG   V  SW   L+ + E  V D  + +A   FP NTP TKE YYYR IFE  +P
Sbjct:  384 EKAEEESERLLRELYLFDVLRADRTTAAHGLELRVPFLDHRFSSYYLSLPPDMRV--PKNG-IEKHLLRETFEDSN--LIPKEILWRPKEAFSDGITSVKNSWFRILQDYIEHQVDDAAMASAAQKFPINTPKTKEGYYYRQIFENHYP 527          
BLAST of FC923733 vs. ExPASy Swiss-Prot
Match: ASNS_MIMIV (Probable asparagine synthetase [glutamine-hydrolyzing] OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R475 PE=3 SV=3)

HSP 1 Score: 100.138 bits (248), Expect = 7.342e-21
Identity = 59/148 (39.86%), Postives = 87/148 (58.78%), Query Frame = 1
Query:    4 EEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVG---YSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFF 438
            +EFH+ET   ++ L+ +D  R +++ +  GLE RVPFLD ++++  M IDP   M   +   IEK I+R AF    + YLP+++LYR KE FSD V     +W   ++   E+  TD+ +QN+ Y F  N P  KEA YYR IF   +
Sbjct:  381 QEFHKETIRLLEELYLFDNKRTDRTMAGNGLEVRVPFLDFNYVDFIMNIDPNLLMY--KSDYIEKKIIRDAF----KGYLPENILYRPKEAFSDAVSSKEINWYRSIQKITEEIYTDEKLQNSNYKF--NKPEIKEALYYRDIFNSHY 520          
The following BLAST results are available for this feature:
BLAST of FC923733 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
ASNS_MOUSE4.444e-2643.59Asparagine synthetase [glutamine-hydrolyzing] OS=M... [more]
ASNS_MESAU4.444e-2643.59Asparagine synthetase [glutamine-hydrolyzing] OS=M... [more]
ASNS_CHICK5.804e-2641.94Asparagine synthetase [glutamine-hydrolyzing] OS=G... [more]
ASNS_BOVIN3.185e-2442.28Asparagine synthetase [glutamine-hydrolyzing] OS=B... [more]
ASNS_MIMIV7.342e-2139.86Probable asparagine synthetase [glutamine-hydrolyz... [more]

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Properties
Property NameValue
Genbank descriptionC31708D03EF StrClemenN Citrus clementina cDNA clone C31708D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923733 ID=FC923733; Name=FC923733; organism=Citrus clementina; type=EST; length=554bp
AAGGAAGAATTCCACCGCGAAACATGTCACAAGATAAAGGCTCTCCACCA
GTATGATTGCTTGAGAGCTAACAAATCAACATCTGCTTGGGGTCTAGAAG
CACGAGTCCCCTTCCTTGACAAAGATTTTATTAATGTAGCAATGGCCATT
GATCCTGAGTGGAAGATGATTAATCCTCAAGAAGGACGTATCGAGAAGTG
GATCCTTAGGAAGGCCTTCGATGATGAGGAGCGACCTTATCTGCCAAAGC
ATGTTCTGTACAGACAGAAGGAACAATTCAGTGATGGTGTTGGCTATAGT
TGGATTGATGGCCTCAAAGCACATGCTGAACAACATGTGACTGATAAAAT
GGTGCAAAATGCTCAATACATCTTCCCACACAACACACCTTTGACTAAAG
AAGCCTACTACTACAGAATGATTTTCGAGAGGTTCTTTCCACAGAATTCA
GCCAGGCTAACTGTCCCAGGAGGTGTGAGTGTAGCATGCAGCACGGCTAA
AGCTGTCGAATGGGATGCTGAGTGGGCAAATATCTTGATCCTTCTGGGAG
GGCT
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