FC923937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923937 vs. ExPASy Swiss-Prot
Match: UREG_PSE14 (Urease accessory protein ureG OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=ureG PE=3 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 1.728e-51 Identity = 101/153 (66.01%), Postives = 122/153 (79.74%), Query Frame = 1 Query: 163 NERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLLKA-DLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLA 618 N + VGIGGPVG+GKTAL LALC LRD+Y+LA VTNDI+T+ED +FL+RN AL ERI VETGGCPH AIRED SINL +++L+ + DL++ ESGGDNL+A FS EL+D IY+IDVS GDK+PRKGGPGI ++DLLVINK DLA Sbjct: 2 NSQPLRVGIGGPVGSGKTALTLALCLALRDRYNLAVVTNDIYTREDADFLVRNEALAPERIIGVETGGCPHTAIREDASINLEAVDQLNRRFEGLDLIIVESGGDNLSATFSPELSDLTIYVIDVSAGDKLPRKGGPGICKSDLLVINKIDLA 154
BLAST of FC923937 vs. ExPASy Swiss-Prot
Match: UREG_BURVG (Urease accessory protein ureG OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=ureG PE=3 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 1.728e-51 Identity = 106/173 (61.27%), Postives = 125/173 (72.25%), Query Frame = 1 Query: 103 PIYSPDYFSRRAPPILSRNFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEE-LSNLLKADLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLA 618 P SP +++ PP+ VGIGGPVG+GKT L+ LCK +RD Y L A+TNDI+TKED L GALPEERI VETGGCPH AIRED SINL ++ LS AD++ ESGGDNLAA FS EL+D IY+IDV+GG+KIPRKGGPGIT++DLLVINKTDLA Sbjct: 4 PASSPARRTKKLPPL----------RVGIGGPVGSGKTTLLEMLCKAMRDTYDLVAITNDIYTKEDQRLLTVAGALPEERIMGVETGGCPHTAIREDASINLEAVDRMLSRFPDADIVFIESGGDNLAATFSPELSDLTIYVIDVAGGEKIPRKGGPGITKSDLLVINKTDLA 166
BLAST of FC923937 vs. ExPASy Swiss-Prot
Match: UREG_BURCM (Urease accessory protein ureG OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=ureG PE=3 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 1.728e-51 Identity = 105/173 (60.69%), Postives = 126/173 (72.83%), Query Frame = 1 Query: 103 PIYSPDYFSRRAPPILSRNFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEE-LSNLLKADLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLA 618 P SP +++ PP+ VGIGGPVG+GKT L+ LCK +R++Y L A+TNDI+TKED L GALPEERI VETGGCPH AIRED SINL ++ LS AD++ ESGGDNLAA FS EL+D IY+IDV+GG+KIPRKGGPGIT++DLLVINKTDLA Sbjct: 4 PALSPARRTKKLPPL----------RVGIGGPVGSGKTTLLEMLCKAMRERYDLVAITNDIYTKEDQRLLTVAGALPEERIMGVETGGCPHTAIREDASINLEAVDRMLSRFPDADIVFIESGGDNLAATFSPELSDLTIYVIDVAGGEKIPRKGGPGITKSDLLVINKTDLA 166
BLAST of FC923937 vs. ExPASy Swiss-Prot
Match: UREG_BURA4 (Urease accessory protein ureG OS=Burkholderia ambifaria (strain MC40-6) GN=ureG PE=3 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 1.728e-51 Identity = 105/173 (60.69%), Postives = 126/173 (72.83%), Query Frame = 1 Query: 103 PIYSPDYFSRRAPPILSRNFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEE-LSNLLKADLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLA 618 P SP +++ PP+ VGIGGPVG+GKT L+ LCK +R++Y L A+TNDI+TKED L GALPEERI VETGGCPH AIRED SINL ++ LS AD++ ESGGDNLAA FS EL+D IY+IDV+GG+KIPRKGGPGIT++DLLVINKTDLA Sbjct: 4 PALSPARRTKKLPPL----------RVGIGGPVGSGKTTLLEMLCKAMRERYDLVAITNDIYTKEDQRLLTVAGALPEERIMGVETGGCPHTAIREDASINLEAVDRMLSRFPDADIVFIESGGDNLAATFSPELSDLTIYVIDVAGGEKIPRKGGPGITKSDLLVINKTDLA 166
BLAST of FC923937 vs. ExPASy Swiss-Prot
Match: UREG_THEEB (Urease accessory protein ureG OS=Thermosynechococcus elongatus (strain BP-1) GN=ureG PE=3 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 2.257e-51 Identity = 100/152 (65.79%), Postives = 119/152 (78.29%), Query Frame = 1 Query: 166 ERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLLK-ADLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLA 618 E VG+ GPVG+GKTAL+ ALCK LRD+Y LA VTNDI+T+ED +FL+R+ ALP ERI VETGGCPH AIRED S+NL +++L + DL+ ESGGDNLAA FS EL D IY+IDV+ GDKIPRKGGPGIT++DLLVINK DLA Sbjct: 2 ETVLRVGVAGPVGSGKTALVDALCKALRDRYRLAVVTNDIYTQEDAQFLVRSQALPPERILGVETGGCPHTAIREDASLNLAAIQQLETAFRPLDLIFVESGGDNLAATFSPELVDLTIYVIDVAAGDKIPRKGGPGITKSDLLVINKIDLA 153
BLAST of FC923937 vs. ExPASy Swiss-Prot
Match: UREG_PSEFS (Urease accessory protein ureG OS=Pseudomonas fluorescens (strain SBW25) GN=ureG PE=3 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 2.257e-51 Identity = 102/153 (66.67%), Postives = 121/153 (79.08%), Query Frame = 1 Query: 163 NERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLLKA-DLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLA 618 N + VGIGGPVG+GKTAL LALC LRD+Y+LA VTNDI+T+ED +FL+RN AL ERI VETGGCPH AIRED SINL +++L+ DL+L ESGGDNL+A FS EL+D IY+IDVS GDK+PRKGGPGI ++DLLVINK DLA Sbjct: 2 NTQPLRVGIGGPVGSGKTALTLALCLALRDRYNLAVVTNDIYTREDADFLVRNQALAPERIIGVETGGCPHTAIREDASINLEAVDQLNRRFPGLDLILVESGGDNLSATFSPELSDLTIYVIDVSAGDKLPRKGGPGICKSDLLVINKIDLA 154
BLAST of FC923937 vs. ExPASy Swiss-Prot
Match: UREG1_METEP (Urease accessory protein ureG 1 OS=Methylobacterium extorquens (strain PA1) GN=ureG1 PE=3 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 2.257e-51 Identity = 100/147 (68.03%), Postives = 116/147 (78.91%), Query Frame = 1 Query: 181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLL-KADLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLA 618 VGIGGPVG+GKTALM LC+ RD Y + A+TNDI+TKED L GALPEERI VETGGCPH AIRED SINL + E+ K DL+L ESGGDNLAA FS ELAD +Y+IDV+GG+KIPRKGGPGIT++DLL++NKTDLA Sbjct: 10 VGIGGPVGSGKTALMEQLCRRFRDSYEICAITNDIYTKEDARILTVAGALPEERILGVETGGCPHTAIREDASINLAAVAEMRRRFPKLDLVLIESGGDNLAATFSPELADLTLYVIDVAGGEKIPRKGGPGITRSDLLIVNKTDLA 156
BLAST of FC923937 vs. ExPASy Swiss-Prot
Match: UREG_BURS3 (Urease accessory protein ureG OS=Burkholderia sp. (strain 383) GN=ureG PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 2.948e-51 Identity = 104/162 (64.20%), Postives = 120/162 (74.07%), Query Frame = 1 Query: 136 APPILSRNFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEE-LSNLLKADLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLA 618 AP R VGIGGPVG+GKT L+ LCK +RD+Y L A+TNDI+TKED L GALPEERI VETGGCPH AIRED SINL ++ LS AD++ ESGGDNLAA FS EL+D IY+IDV+GG+KIPRKGGPGIT++DLLVINKTDLA Sbjct: 5 APSSARRTKKLPPLRVGIGGPVGSGKTTLLEMLCKAMRDRYDLVAITNDIYTKEDQRLLTVAGALPEERIMGVETGGCPHTAIREDASINLEAVDRMLSRFPDADIVFIESGGDNLAATFSPELSDLTIYVIDVAGGEKIPRKGGPGITKSDLLVINKTDLA 166
BLAST of FC923937 vs. ExPASy Swiss-Prot
Match: UREG_BURCH (Urease accessory protein ureG OS=Burkholderia cenocepacia (strain HI2424) GN=ureG PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 2.948e-51 Identity = 103/162 (63.58%), Postives = 121/162 (74.69%), Query Frame = 1 Query: 136 APPILSRNFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEE-LSNLLKADLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLA 618 AP + R VGIGGPVG+GKT L+ LCK +RD+Y L A+TNDI+TKED L GALPEERI VETGGCPH AIRED SINL ++ L+ AD++ ESGGDNLAA FS EL+D IY+IDV+GG+KIPRKGGPGIT++DLLVINKTDLA Sbjct: 5 APSSIRRTKKLPPLRVGIGGPVGSGKTTLLEMLCKAMRDRYDLVAITNDIYTKEDQRLLTVAGALPEERIMGVETGGCPHTAIREDASINLEAVDRMLARFPDADIVFIESGGDNLAATFSPELSDLTIYVIDVAGGEKIPRKGGPGITKSDLLVINKTDLA 166
BLAST of FC923937 vs. ExPASy Swiss-Prot
Match: UREG_BURCA (Urease accessory protein ureG OS=Burkholderia cenocepacia (strain AU 1054) GN=ureG PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 2.948e-51 Identity = 103/162 (63.58%), Postives = 121/162 (74.69%), Query Frame = 1 Query: 136 APPILSRNFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEE-LSNLLKADLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLA 618 AP + R VGIGGPVG+GKT L+ LCK +RD+Y L A+TNDI+TKED L GALPEERI VETGGCPH AIRED SINL ++ L+ AD++ ESGGDNLAA FS EL+D IY+IDV+GG+KIPRKGGPGIT++DLLVINKTDLA Sbjct: 5 APSSIRRTKKLPPLRVGIGGPVGSGKTTLLEMLCKAMRDRYDLVAITNDIYTKEDQRLLTVAGALPEERIMGVETGGCPHTAIREDASINLEAVDRMLARFPDADIVFIESGGDNLAATFSPELSDLTIYVIDVAGGEKIPRKGGPGITKSDLLVINKTDLA 166 The following BLAST results are available for this feature:
BLAST of FC923937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 253
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923937 ID=FC923937; Name=FC923937; organism=Citrus clementina; type=EST; length=618bpback to top |