FC923937

Overview
NameFC923937
Unique NameFC923937
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length618
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923937 vs. ExPASy Swiss-Prot
Match: UREG_PSEMY (Urease accessory protein ureG OS=Pseudomonas mendocina (strain ymp) GN=ureG PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 3.850e-51
Identity = 99/153 (64.71%), Postives = 122/153 (79.74%), Query Frame = 1
Query:  163 NERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLLKA-DLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLA 618
            N +   VGIGGPVG+GKTAL LALC+ LR++Y++A VTNDI+T+ED +FL+RN AL  ERI  VETGGCPH AIRED SINL  +E+L+      DL++ ESGGDNL+A FS EL+D  +Y+IDVS GDK+PRKGGPGI ++DLLVINK DLA
Sbjct:    2 NSQPLRVGIGGPVGSGKTALTLALCRALRERYNIAVVTNDIYTQEDAQFLVRNEALEPERIIGVETGGCPHTAIREDASINLEAVEQLNRRFPGLDLIIVESGGDNLSATFSPELSDLTLYVIDVSAGDKLPRKGGPGICKSDLLVINKVDLA 154          
BLAST of FC923937 vs. ExPASy Swiss-Prot
Match: UREG_BURCC (Urease accessory protein ureG OS=Burkholderia cenocepacia (strain MC0-3) GN=ureG PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 3.850e-51
Identity = 103/162 (63.58%), Postives = 121/162 (74.69%), Query Frame = 1
Query:  136 APPILSRNFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEE-LSNLLKADLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLA 618
            AP  + R        VGIGGPVG+GKT L+  LCK +RD+Y L A+TNDI+TKED   L   GALPEERI  VETGGCPH AIRED SINL  ++  L+    AD++  ESGGDNLAA FS EL+D  IY+IDV+GG+KIPRKGGPGIT++DLLVINKTDLA
Sbjct:    5 APSSVRRTKKLPPLRVGIGGPVGSGKTTLLEMLCKAMRDRYDLVAITNDIYTKEDQRLLTVAGALPEERIMGVETGGCPHTAIREDASINLEAVDRMLARFPDADIVFIESGGDNLAATFSPELSDLTIYVIDVAGGEKIPRKGGPGITKSDLLVINKTDLA 166          
BLAST of FC923937 vs. ExPASy Swiss-Prot
Match: UREG_AZOVD (Urease accessory protein ureG OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=ureG PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 3.850e-51
Identity = 102/153 (66.67%), Postives = 119/153 (77.78%), Query Frame = 1
Query:  163 NERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLLKA-DLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLA 618
            N +   VGIGGPVG+GKTAL LALC+ LR +Y LA VTNDI+T+ED EFL+RN AL  ERI  VETGGCPH AIRED SINL  +E L+      DL+L ESGGDNL+A FS EL+D  +Y+IDVS GDK+PRKGGPGI ++DLLVINK DLA
Sbjct:    2 NSQPLRVGIGGPVGSGKTALTLALCRALRGRYELAVVTNDIYTQEDAEFLVRNEALAPERIIGVETGGCPHTAIREDASINLEAVERLNRRFPGLDLILVESGGDNLSATFSPELSDLTLYVIDVSAGDKLPRKGGPGICKSDLLVINKIDLA 154          
BLAST of FC923937 vs. ExPASy Swiss-Prot
Match: UREG2_SACEN (Urease accessory protein ureG 2 OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=ureG2 PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 3.850e-51
Identity = 105/178 (58.99%), Postives = 132/178 (74.16%), Query Frame = 1
Query:   88 PHSHEPIYSPDYFSRRAPPILSRNFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEEL-SNLLKADLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLA 618
            PH+H    +P   +R A P+     + RA  +G+GGPVG+GKTA + ALC+ LRD+ S+A VTNDI+T+ED +FL+R+  LP ERI AVETG CPH AIR+DIS NL  +E+L + +   DL+L ESGGDNL A FS+ L D  I++IDV+GGD IPRKGGPGIT ADLLVINKTDLA
Sbjct:   12 PHAHLHSAAP---ARPADPVRPDG-SRRALRIGLGGPVGSGKTATVAALCRALRDRLSIAVVTNDIYTREDADFLLRHAILPAERILAVETGACPHTAIRDDISANLEAVEQLEATVGPLDLILVESGGDNLTATFSKGLVDAQIFVIDVAGGDDIPRKGGPGITTADLLVINKTDLA 185          
BLAST of FC923937 vs. ExPASy Swiss-Prot
Match: UREG_ACIBY (Urease accessory protein ureG OS=Acinetobacter baumannii (strain AYE) GN=ureG PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 5.029e-51
Identity = 98/147 (66.67%), Postives = 119/147 (80.95%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLLKA-DLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLA 618
            VGIGGPVG+GKTAL L LC+ LRDKY++A VTNDI+TKED  FL RN A+  +RI  VETGGCPH AIRED SINL  +++L       +L++ ESGGDNLAA FS EL+D  +Y+IDV+GG+KIPRKGGPGIT++DLL+INKTDLA
Sbjct:    9 VGIGGPVGSGKTALTLNLCRALRDKYNMAVVTNDIYTKEDSNFLTRNEAMSPDRIVGVETGGCPHTAIREDASINLAAIDDLCEKFDGLELIIIESGGDNLAATFSPELSDLTLYVIDVAGGEKIPRKGGPGITKSDLLIINKTDLA 155          
BLAST of FC923937 vs. ExPASy Swiss-Prot
Match: UREG_ACIBT (Urease accessory protein ureG OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=ureG PE=3 SV=2)

HSP 1 Score: 200.675 bits (509), Expect = 5.029e-51
Identity = 98/147 (66.67%), Postives = 119/147 (80.95%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLLKA-DLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLA 618
            VGIGGPVG+GKTAL L LC+ LRDKY++A VTNDI+TKED  FL RN A+  +RI  VETGGCPH AIRED SINL  +++L       +L++ ESGGDNLAA FS EL+D  +Y+IDV+GG+KIPRKGGPGIT++DLL+INKTDLA
Sbjct:    9 VGIGGPVGSGKTALTLNLCRALRDKYNMAVVTNDIYTKEDSNFLTRNEAMSPDRIVGVETGGCPHTAIREDASINLAAIDDLCEKFDGLELIIIESGGDNLAATFSPELSDLTLYVIDVAGGEKIPRKGGPGITKSDLLIINKTDLA 155          
BLAST of FC923937 vs. ExPASy Swiss-Prot
Match: UREG_ACIBS (Urease accessory protein ureG OS=Acinetobacter baumannii (strain SDF) GN=ureG PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 5.029e-51
Identity = 98/147 (66.67%), Postives = 119/147 (80.95%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLLKA-DLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLA 618
            VGIGGPVG+GKTAL L LC+ LRDKY++A VTNDI+TKED  FL RN A+  +RI  VETGGCPH AIRED SINL  +++L       +L++ ESGGDNLAA FS EL+D  +Y+IDV+GG+KIPRKGGPGIT++DLL+INKTDLA
Sbjct:    9 VGIGGPVGSGKTALTLNLCRALRDKYNMAVVTNDIYTKEDSNFLTRNEAMSPDRIVGVETGGCPHTAIREDASINLAAIDDLCEKFDGLELIIIESGGDNLAATFSPELSDLTLYVIDVAGGEKIPRKGGPGITKSDLLIINKTDLA 155          
BLAST of FC923937 vs. ExPASy Swiss-Prot
Match: UREG_ACIBC (Urease accessory protein ureG OS=Acinetobacter baumannii (strain ACICU) GN=ureG PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 5.029e-51
Identity = 98/147 (66.67%), Postives = 119/147 (80.95%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLLKA-DLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLA 618
            VGIGGPVG+GKTAL L LC+ LRDKY++A VTNDI+TKED  FL RN A+  +RI  VETGGCPH AIRED SINL  +++L       +L++ ESGGDNLAA FS EL+D  +Y+IDV+GG+KIPRKGGPGIT++DLL+INKTDLA
Sbjct:    9 VGIGGPVGSGKTALTLNLCRALRDKYNMAVVTNDIYTKEDSNFLTRNEAMSPDRIVGVETGGCPHTAIREDASINLAAIDDLCEKFDGLELIIIESGGDNLAATFSPELSDLTLYVIDVAGGEKIPRKGGPGITKSDLLIINKTDLA 155          
BLAST of FC923937 vs. ExPASy Swiss-Prot
Match: UREG_ACIB5 (Urease accessory protein ureG OS=Acinetobacter baumannii (strain AB0057) GN=ureG PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 5.029e-51
Identity = 98/147 (66.67%), Postives = 119/147 (80.95%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLLKA-DLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLA 618
            VGIGGPVG+GKTAL L LC+ LRDKY++A VTNDI+TKED  FL RN A+  +RI  VETGGCPH AIRED SINL  +++L       +L++ ESGGDNLAA FS EL+D  +Y+IDV+GG+KIPRKGGPGIT++DLL+INKTDLA
Sbjct:    9 VGIGGPVGSGKTALTLNLCRALRDKYNMAVVTNDIYTKEDSNFLTRNEAMSPDRIVGVETGGCPHTAIREDASINLAAIDDLCEKFDGLELIIIESGGDNLAATFSPELSDLTLYVIDVAGGEKIPRKGGPGITKSDLLIINKTDLA 155          
BLAST of FC923937 vs. ExPASy Swiss-Prot
Match: UREG_ACIB3 (Urease accessory protein ureG OS=Acinetobacter baumannii (strain AB307-0294) GN=ureG PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 5.029e-51
Identity = 98/147 (66.67%), Postives = 119/147 (80.95%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLLKA-DLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLA 618
            VGIGGPVG+GKTAL L LC+ LRDKY++A VTNDI+TKED  FL RN A+  +RI  VETGGCPH AIRED SINL  +++L       +L++ ESGGDNLAA FS EL+D  +Y+IDV+GG+KIPRKGGPGIT++DLL+INKTDLA
Sbjct:    9 VGIGGPVGSGKTALTLNLCRALRDKYNMAVVTNDIYTKEDSNFLTRNEAMSPDRIVGVETGGCPHTAIREDASINLAAIDDLCEKFDGLELIIIESGGDNLAATFSPELSDLTLYVIDVAGGEKIPRKGGPGITKSDLLIINKTDLA 155          
The following BLAST results are available for this feature:
BLAST of FC923937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 253
Match NameE-valueIdentityDescription
UREG_PSEMY3.850e-5164.71Urease accessory protein ureG OS=Pseudomonas mendo... [more]
UREG_BURCC3.850e-5163.58Urease accessory protein ureG OS=Burkholderia ceno... [more]
UREG_AZOVD3.850e-5166.67Urease accessory protein ureG OS=Azotobacter vinel... [more]
UREG2_SACEN3.850e-5158.99Urease accessory protein ureG 2 OS=Saccharopolyspo... [more]
UREG_ACIBY5.029e-5166.67Urease accessory protein ureG OS=Acinetobacter bau... [more]
UREG_ACIBT5.029e-5166.67Urease accessory protein ureG OS=Acinetobacter bau... [more]
UREG_ACIBS5.029e-5166.67Urease accessory protein ureG OS=Acinetobacter bau... [more]
UREG_ACIBC5.029e-5166.67Urease accessory protein ureG OS=Acinetobacter bau... [more]
UREG_ACIB55.029e-5166.67Urease accessory protein ureG OS=Acinetobacter bau... [more]
UREG_ACIB35.029e-5166.67Urease accessory protein ureG OS=Acinetobacter bau... [more]

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Properties
Property NameValue
Genbank descriptionC31710F10EF StrClemenN Citrus clementina cDNA clone C31710F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923937 ID=FC923937; Name=FC923937; organism=Citrus clementina; type=EST; length=618bp
ACCGATGAAAAAAATCATGGTGATTCAACAGCAACATCATGGGTGGGGTC
AGACGGAAGGGTGTATCATAGCCATGATGGACTGGCGCCACACTCGCACG
AACCCATTTACTCTCCAGACTATTTCAGCAGAAGAGCTCCGCCTATTCTC
AGCAGAAATTTCAATGAGAGAGCTTTTACCGTTGGCATTGGTGGCCCTGT
TGGTACTGGGAAAACAGCTTTAATGCTGGCTTTGTGTAAATTCTTGCGGG
ACAAGTACAGTCTTGCAGCTGTCACAAATGATATTTTCACAAAAGAAGAT
GGTGAATTCCTGATGCGGAATGGTGCTCTGCCTGAGGAGAGAATACGTGC
TGTGGAAACAGGTGGATGTCCTCATGCTGCAATTCGTGAAGACATCAGCA
TCAATCTGGGCCCTCTCGAGGAACTTTCTAACTTGCTCAAAGCAGACCTA
CTTCTTTGCGAATCTGGGGGAGATAATTTAGCTGCCAACTTCAGCAGGGA
ACTTGCAGACTATATCATTTATATAATAGACGTTTCTGGTGGTGATAAAA
TTCCTCGGAAAGGTGGCCCAGGCATCACCCAAGCTGATCTTCTGGTGATA
AACAAAACTGACCTTGCT
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