FC923946

Overview
NameFC923946
Unique NameFC923946
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923946 vs. ExPASy Swiss-Prot
Match: P2C13_ORYSJ (Probable protein phosphatase 2C 13 OS=Oryza sativa subsp. japonica GN=Os02g0255100 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.390e-23
Identity = 60/135 (44.44%), Postives = 86/135 (63.70%), Query Frame = 1
Query:  298 GLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYEKTDRAILSHSSDLGRG-GSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTID 699
            G +K G+S  +GK    MED++  K  ++ G  + LF ++DGH G     YL+++LF N+LK  EF  D + +IS+ Y+KTD   L   S+  R  GSTA TA+L+ G  L+VANVGDSRAV+S AG A+ ++ D
Sbjct:  108 GKLKCGYSSFRGK-RATMEDFYDVKLTEIDGQAVSLFGVFDGHGGPRAAEYLKENLFENLLKHPEFLTDTKLAISETYQKTDTDFLESESNAFRDDGSTASTAVLVGGH-LYVANVGDSRAVVSKAGKAMALSED 240          
BLAST of FC923946 vs. ExPASy Swiss-Prot
Match: P2C52_ORYSJ (Probable protein phosphatase 2C 52 OS=Oryza sativa subsp. japonica GN=Os05g0587100 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.716e-22
Identity = 58/135 (42.96%), Postives = 84/135 (62.22%), Query Frame = 1
Query:  298 GLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYEKTDRAILSHSSDLGRG-GSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTID 699
            G +  G+S  +GK    MED++  K  ++   ++ LF I+DGH G     YL++HLF N++K  EF  + + +IS+ Y+KTD   L   S   R  GSTA TA+L+ G  L+VANVGDSRAV+S AG A+ ++ D
Sbjct:  226 GFLSCGYSSFRGK-RASMEDFYDIKSSKIDDKQISLFGIFDGHGGSRAAEYLKEHLFENLMKHPEFMTNTKLAISETYKKTDSEFLDSESHTHRDDGSTASTAVLV-GNHLYVANVGDSRAVISKAGKAIALSED 358          
BLAST of FC923946 vs. ExPASy Swiss-Prot
Match: P2C07_ORYSJ (Probable protein phosphatase 2C 7 OS=Oryza sativa subsp. japonica GN=Os01g0618200 PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 7.008e-21
Identity = 55/135 (40.74%), Postives = 84/135 (62.22%), Query Frame = 1
Query:  298 GLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYEKTDRAILSHSSDLGR-GGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTID 699
            G +  G+S  +G+  + MED++  K  ++  +++ LF I+DGH G     +L+KHLF N+LK   F  D + +IS+ Y KTD   L   +++ R  GSTA TAI + G  ++VANVGDSR V+S AG A+ ++ D
Sbjct:  112 GRMSCGYSSFRGRRAN-MEDFYDIKSSKVDDNQINLFGIFDGHGGSHAAEHLKKHLFENLLKHPSFITDTKSAISETYRKTDSDFLDAETNINREDGSTASTAIFV-GNHIYVANVGDSRTVMSKAGKAIALSSD 244          
BLAST of FC923946 vs. ExPASy Swiss-Prot
Match: P2C76_ARATH (Probable protein phosphatase 2C 76 OS=Arabidopsis thaliana GN=At5g53140 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.933e-20
Identity = 52/135 (38.52%), Postives = 84/135 (62.22%), Query Frame = 1
Query:  298 GLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYEKTDRAILSHSSDLGRG-GSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTID 699
            G +  G+   +GK +  MED++  K   ++G  + +F I+DGH G     YL++HLF+N++K  +F  D + ++++ Y++TD A L    D  R  GSTA  A+L+ G  L+VANVGDSR ++S AG A+ ++ D
Sbjct:   98 GSLSCGYCSFRGKRS-TMEDFYDIKASTIEGQAVCMFGIFDGHGGSRAAEYLKEHLFNNLMKHPQFLTDTKLALNETYKQTDVAFLESEKDTYRDDGSTASAAVLV-GNHLYVANVGDSRTIVSKAGKAIALSDD 230          
BLAST of FC923946 vs. ExPASy Swiss-Prot
Match: P2C45_ORYSJ (Probable protein phosphatase 2C 45 OS=Oryza sativa subsp. japonica GN=Os04g0659500 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 7.749e-20
Identity = 52/134 (38.81%), Postives = 82/134 (61.19%), Query Frame = 1
Query:  298 GLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYEKTDRAILSHSSDLGRGGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTID 699
            G   +G++   GK    MED++  +   + G  +GLF ++DGH G  V  Y++++LFS++L+  +F  D + +I  AY+ TD   L   S   + GSTA TA+L+ G RL+VANVGDSRA++   G A+ ++ D
Sbjct:   24 GKFSYGYASSPGK-RASMEDFYETRIDSVDGQIIGLFGVFDGHGGAKVAEYVKQNLFSHLLRHPKFISDTKVAIDDAYKSTDSEFLESDSSQNQCGSTASTAVLV-GDRLFVANVGDSRAIICRGGNAIAVSKD 155          
BLAST of FC923946 vs. ExPASy Swiss-Prot
Match: P2C69_ARATH (Probable protein phosphatase 2C 69 OS=Arabidopsis thaliana GN=At5g10740 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.012e-19
Identity = 55/135 (40.74%), Postives = 81/135 (60.00%), Query Frame = 1
Query:  298 GLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYEKTDRAILSHSSDLGR-GGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTID 699
            G   +G++   GK +  MED+   +   + G  +GLF ++DGH G     Y+++HLFSN++   +F  D + +I+ AY  TD  +L   +   R  GSTA TAIL+ G RL VANVGDSRAV+S  G A+ ++ D
Sbjct:   30 GKFSYGYASSAGKRSS-MEDFFETRIDGINGEIVGLFGVFDGHGGARAAEYVKRHLFSNLITHPKFISDTKSAITDAYNHTDSELLKSENSHNRDAGSTASTAILV-GDRLVVANVGDSRAVISRGGKAIAVSRD 162          
BLAST of FC923946 vs. ExPASy Swiss-Prot
Match: P2C10_ORYSJ (Probable protein phosphatase 2C 10 OS=Oryza sativa subsp. japonica GN=Os02g0149800 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.322e-19
Identity = 55/135 (40.74%), Postives = 81/135 (60.00%), Query Frame = 1
Query:  298 GLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYEKTDRAIL-SHSSDLGRGGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTID 699
            G   +G++   GK    MED++  +   + G  +GLF ++DGH G     Y+++HLFSN++K  +F  D + +I++ Y  TD   L + SS     GSTA TAIL+ G RL VANVGDSRAV+   G A+ ++ D
Sbjct:   79 GKFSYGYASAPGK-RASMEDFYETRIDGVDGETIGLFGVFDGHGGARAAEYVKQHLFSNLIKHPKFISDIKSAIAETYNHTDSEFLKAESSHTRDAGSTASTAILV-GDRLLVANVGDSRAVVCRGGDAIAVSRD 211          
BLAST of FC923946 vs. ExPASy Swiss-Prot
Match: P2C55_ORYSJ (Probable protein phosphatase 2C 55 OS=Oryza sativa subsp. japonica GN=Os06g0526700 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.726e-19
Identity = 62/136 (45.59%), Postives = 83/136 (61.03%), Query Frame = 1
Query:  298 GLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYEKTDRAIL-SHSSDLGR-GGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTID 699
            G + +G+S  +G+    MED    K   + G  + LF ++DGH G     YL+KHLF N++K  +F  D + +I++ + KTD   L S SSD  R  GSTAV AILI G RL+VANVGDSRAV   AG AV ++ D
Sbjct:  119 GKLSWGYSSFQGR-RPSMEDRLSIKSTTVNGETVSLFGVFDGHGGPRAAEYLKKHLFKNLVKHPKFLKDTKLAINQTFLKTDADFLQSISSDRYRDDGSTAVAAILI-GNRLYVANVGDSRAVALKAGKAVPLSED 252          
BLAST of FC923946 vs. ExPASy Swiss-Prot
Match: P2C59_ARATH (Probable protein phosphatase 2C 59 OS=Arabidopsis thaliana GN=WIN2 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.560e-19
Identity = 53/135 (39.26%), Postives = 82/135 (60.74%), Query Frame = 1
Query:  298 GLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYEKTDRAILSHSSDLGR-GGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTID 699
            G   +G++   GK +  MED++  +   ++G  +GLF ++DGH G     Y++++LFSN+++  +F  D   +I+ AY +TD   L   +   R  GSTA TAIL+ G RL VANVGDSRAV+   G A+ ++ D
Sbjct:   30 GKFSYGYASSPGKRSS-MEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKQNLFSNLIRHPKFISDTTAAIADAYNQTDSEFLKSENSQNRDAGSTASTAILV-GDRLLVANVGDSRAVICRGGNAIAVSRD 162          
BLAST of FC923946 vs. ExPASy Swiss-Prot
Match: P2C71_ARATH (Probable protein phosphatase 2C 71 OS=Arabidopsis thaliana GN=At5g24940 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.567e-19
Identity = 55/135 (40.74%), Postives = 80/135 (59.26%), Query Frame = 1
Query:  298 GLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYEKTDRAIL-SHSSDLGRGGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTID 699
            G   +G++   GK +  MED+   +   + G  +GLF ++DGH G     Y+++HLFSN++   +F  D + +I+ AY  TD  +L S +S     GSTA TAIL+ G RL VANVGDSRAV+   G A  ++ D
Sbjct:   30 GKFSYGYASSAGKRSS-MEDFFETRIDGIDGEIVGLFGVFDGHGGSRAAEYVKRHLFSNLITHPKFISDTKSAIADAYTHTDSELLKSENSHTRDAGSTASTAILV-GDRLLVANVGDSRAVICRGGNAFAVSRD 162          
The following BLAST results are available for this feature:
BLAST of FC923946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
P2C13_ORYSJ4.390e-2344.44Probable protein phosphatase 2C 13 OS=Oryza sativa... [more]
P2C52_ORYSJ3.716e-2242.96Probable protein phosphatase 2C 52 OS=Oryza sativa... [more]
P2C07_ORYSJ7.008e-2140.74Probable protein phosphatase 2C 7 OS=Oryza sativa ... [more]
P2C76_ARATH5.933e-2038.52Probable protein phosphatase 2C 76 OS=Arabidopsis ... [more]
P2C45_ORYSJ7.749e-2038.81Probable protein phosphatase 2C 45 OS=Oryza sativa... [more]
P2C69_ARATH1.012e-1940.74Probable protein phosphatase 2C 69 OS=Arabidopsis ... [more]
P2C10_ORYSJ1.322e-1940.74Probable protein phosphatase 2C 10 OS=Oryza sativa... [more]
P2C55_ORYSJ1.726e-1945.59Probable protein phosphatase 2C 55 OS=Oryza sativa... [more]
P2C59_ARATH6.560e-1939.26Probable protein phosphatase 2C 59 OS=Arabidopsis ... [more]
P2C71_ARATH8.567e-1940.74Probable protein phosphatase 2C 71 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionC31710G11EF StrClemenN Citrus clementina cDNA clone C31710G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923946 ID=FC923946; Name=FC923946; organism=Citrus clementina; type=EST; length=706bp
GGAAGAAGAAGAACATCAAAAACCCCCCACGGAACAAAGATCACCAACAA
GGAGCATCAGTTGATTTTTAGCTTTGAATTGATCAACGAGAGATTGAGAA
TTCTGGGAGCTGGGCTTGATTTAAAATTTTGGAGTAGAGTTGTTTACCAA
GAGTTTGATGTTGAAATTTTAGTTGAATTAGTTGGAACTGCTTTGCTGAA
TTTTTATTTTATGGATAGCTTATGCTGCTTTAATGCTTCGTACTCGAAGC
TTGTGGGAGGACGCTCGTCATCTACTGGTAAGGGGAGAAGCAATGTTGGA
TTAGTCAAGTTTGGTTTCAGCTTGGTAAAAGGGAAAGCTAATCATCCCAT
GGAGGATTATCATGTTGCAAAATTTGTACAACTTCAAGGTCATGAATTAG
GGTTGTTTGCTATTTATGACGGCCATTTGGGAGAAACTGTGCCTGCCTAC
CTACAAAAGCATTTGTTTTCCAACATCCTAAAGGAGGAAGAGTTTTGGGT
TGACCCCCAGAGATCTATCTCTAAAGCTTATGAGAAGACAGACCGAGCAA
TTCTCTCACACAGCTCTGACTTGGGCCGGGGTGGATCCACTGCTGTTACT
GCAATTTTGATAAATGGTCAAAGGTTATGGGTAGCCAACGTTGGAGATTC
TCGAGCAGTTCTTTCAACGGCTGGCGTTGCAGTACAGATGACTATAGACA
TGAGCC
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