FC923949

Overview
NameFC923949
Unique NameFC923949
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length605
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig2823 contig Ccv1_Contig2823:106..710. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923949 vs. ExPASy Swiss-Prot
Match: ASNS_MAIZE (Asparagine synthetase [glutamine-hydrolyzing] OS=Zea mays GN=ASN1 PE=2 SV=2)

HSP 1 Score: 337.806 bits (865), Expect = 2.534e-92
Identity = 157/200 (78.50%), Postives = 175/200 (87.50%), Query Frame = 1
Query:    1 KSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTX*AVEW 600
            KSLGVKMVISGEGSDEIFGGYLYFHKAPNK+EF  ETC KIKALH YDCLRANK+TSAWG+EARVPFLDK FI+VAM IDPEW MI    GRIEKW++RKAFDD+E PYLPKH+LYRQKEQFSDGVGY+WIDGLK+  EQ VTD+M+ NA  +FP+NTP+ KEAYYYRMIFER FPQ+SAR TVP G S+ACST  A+EW
Sbjct:  332 KSLGVKMVISGEGSDEIFGGYLYFHKAPNKKEFLEETCRKIKALHLYDCLRANKATSAWGVEARVPFLDKSFISVAMDIDPEWNMIKRDLGRIEKWVMRKAFDDDEHPYLPKHILYRQKEQFSDGVGYNWIDGLKSFTEQQVTDEMMNNAAQMFPYNTPVNKEAYYYRMIFERLFPQDSARETVPWGPSIACSTPAAIEW 531          
BLAST of FC923949 vs. ExPASy Swiss-Prot
Match: ASNB_ECOLI (Asparagine synthetase B [glutamine-hydrolyzing] OS=Escherichia coli (strain K12) GN=asnB PE=1 SV=3)

HSP 1 Score: 255.758 bits (652), Expect = 1.266e-67
Identity = 125/201 (62.19%), Postives = 153/201 (76.12%), Query Frame = 1
Query:    1 KSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTX*AVEWD 603
            K++G+KMV+SGEGSDE+FGGYLYFHKAPN +E H ET  K+ ALH YDC RANK+ SAWG+EARVPFLDK F++VAM I+P+ KM     G++EK ILR+ F+     YLP  V +RQKEQFSDGVGYSWID LK  A Q V+D+ ++ A++ FP+NTP +KEAY YR IFE  FP  SA   VPGG SVACS+  A+EWD
Sbjct:  338 KAMGIKMVLSGEGSDEVFGGYLYFHKAPNAKELHEETVRKLLALHMYDCARANKAMSAWGVEARVPFLDKKFLDVAMRINPQDKMCG--NGKMEKHILRECFE----AYLPASVAWRQKEQFSDGVGYSWIDTLKEVAAQQVSDQQLETARFRFPYNTPTSKEAYLYREIFEELFPLPSAAECVPGGPSVACSSAKAIEWD 532          
BLAST of FC923949 vs. ExPASy Swiss-Prot
Match: ASNS2_YEAST (Asparagine synthetase [glutamine-hydrolyzing] 2 OS=Saccharomyces cerevisiae GN=ASN2 PE=1 SV=2)

HSP 1 Score: 241.891 bits (616), Expect = 1.892e-63
Identity = 118/188 (62.77%), Postives = 146/188 (77.66%), Query Frame = 1
Query:    1 KSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEE----RPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTV 552
            K+ GVKMV+SGEGSDEIFGGYLYF +AP+  EFH E+  ++K LH  DCLRANKST AWGLEARVPFLDKDF+ + M IDP  KMI P+EGRIEK+ILRKAFD  +    +PYLP+ +L+RQKEQFSDGVGYSWIDGL+  AE+ ++D M  N +  +  + P TKEAY+YR+ F+ +FPQ +A  TV
Sbjct:  356 KAQGVKMVLSGEGSDEIFGGYLYFAQAPSAAEFHTESVQRVKNLHLADCLRANKSTMAWGLEARVPFLDKDFLQLCMNIDPNEKMIKPKEGRIEKYILRKAFDTTDEPDVKPYLPEEILWRQKEQFSDGVGYSWIDGLRDTAERAISDAMFANPKADWGDDIPTTKEAYWYRLKFDAWFPQKTAADTV 543          
BLAST of FC923949 vs. ExPASy Swiss-Prot
Match: ASNS_DICDI (Probable asparagine synthetase [glutamine-hydrolyzing] OS=Dictyostelium discoideum GN=asns PE=1 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 7.191e-63
Identity = 116/188 (61.70%), Postives = 144/188 (76.60%), Query Frame = 1
Query:    1 KSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEG--RIEKWILRKAFD--DEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTV 552
            K++GVKMV+SGEGSDEIFGGYLYFH AP+  EFH E C +IKALH +DCLRANKST+AWG+E RVPFLD+ F++VAM IDP  K+ +  +G  R+EK+ILRKAF+  + E+PYLP  VL+RQKEQFSDGVGYSWIDGLK +AE  V+D+     +  FP +TP TKEA+ YR +FE  +P      TV
Sbjct:  344 KAMGVKMVLSGEGSDEIFGGYLYFHNAPDANEFHVECCRRIKALHSFDCLRANKSTAAWGVEVRVPFLDQRFLDVAMNIDPSHKVCHDDQGKKRMEKYILRKAFETKEGEKPYLPSSVLWRQKEQFSDGVGYSWIDGLKENAENEVSDEEFAKRESYFPDDTPTTKEAFLYRKMFEAIYPGKECMETV 531          
BLAST of FC923949 vs. ExPASy Swiss-Prot
Match: ASNS1_YEAST (Asparagine synthetase [glutamine-hydrolyzing] 1 OS=Saccharomyces cerevisiae GN=ASN1 PE=1 SV=2)

HSP 1 Score: 234.572 bits (597), Expect = 3.021e-61
Identity = 114/188 (60.64%), Postives = 144/188 (76.60%), Query Frame = 1
Query:    1 KSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFD----DEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTV 552
            K+ GVKMV+SGEGSDEIFGGYLYF +AP+  EFH E+  ++K LH  DCLRANKST AWGLEARVPFLD++F+ + M IDP  KMI P+EGRIEK+ILRKAFD     + +PYLP+ +L+RQKEQFSDGVGYSWIDGLK  AE  ++D+M  + +  +  + P TKEA++YR+ F+  FPQ +   TV
Sbjct:  357 KAQGVKMVLSGEGSDEIFGGYLYFAQAPSAAEFHTESVQRVKNLHLADCLRANKSTMAWGLEARVPFLDREFLQLCMNIDPNEKMIKPKEGRIEKYILRKAFDTTGEPDAKPYLPEEILWRQKEQFSDGVGYSWIDGLKDTAEAVISDEMFASPKAEWGSDIPTTKEAFWYRLKFDALFPQKTVADTV 544          
BLAST of FC923949 vs. ExPASy Swiss-Prot
Match: ASNS_SCHPO (Probable asparagine synthetase [glutamine-hydrolyzing] OS=Schizosaccharomyces pombe GN=SPBC119.10 PE=1 SV=3)

HSP 1 Score: 214.927 bits (546), Expect = 2.477e-55
Identity = 112/185 (60.54%), Postives = 135/185 (72.97%), Query Frame = 1
Query:    1 KSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKM-INPQEGRIEKWILRKAFDDEE----RPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSA 540
            K+ GVKMV+SGEGSDEIFGGYLYF  AP++E FH E   ++K LH  DCLRANKST AWGLEARVPFLDKDF+ VA+ IDPE KM IN   GR EK+ILRKAFD       +PYLP+ +L+RQKEQFSDGVGYSWID LK  AE  ++D      +  +  + P TKEA++YR +F+  FP+  A
Sbjct:  345 KAQGVKMVLSGEGSDEIFGGYLYFGNAPSREAFHSECVRRVKNLHLSDCLRANKSTMAWGLEARVPFLDKDFLEVALNIDPEEKMYIN---GRKEKYILRKAFDTTHDSSLQPYLPQDILWRQKEQFSDGVGYSWIDALKDTAELCISDDEFALPRREWGDDIPTTKEAFWYRKLFDEIFPRQCA 526          
BLAST of FC923949 vs. ExPASy Swiss-Prot
Match: ASNS_CRIGR (Asparagine synthetase [glutamine-hydrolyzing] OS=Cricetulus griseus GN=ASNS PE=2 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 1.046e-37
Identity = 85/180 (47.22%), Postives = 117/180 (65.00%), Query Frame = 1
Query:   19 MVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDG---VGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLT 549
            ++ SGEGSDE+  GY+YFHKAP+ E+   E+   +K L+ +D LRA+++T+A GLE RVPFLD  F +  +++ PE ++  P+ G IEK +LR+ F+D     LPK +L+R KE FSDG   V  SW   L+ + E  V D+M+  A   FP NTP TKE YYYR IFER +P  +  LT
Sbjct:  360 VIFSGEGSDELTQGYIYFHKAPSPEKAEEESERLLKELYLFDVLRADRTTAAHGLELRVPFLDHRFSSYYLSLPPEMRI--PKNG-IEKHLLRETFEDSN--LLPKEILWRPKEAFSDGITSVKNSWFKILQDYVEHQVDDEMMATAAQKFPFNTPKTKEGYYYRQIFERHYPGRADWLT 534          
BLAST of FC923949 vs. ExPASy Swiss-Prot
Match: ASNS_PONAB (Asparagine synthetase [glutamine-hydrolyzing] OS=Pongo abelii GN=ASNS PE=2 SV=3)

HSP 1 Score: 154.836 bits (390), Expect = 3.042e-37
Identity = 81/173 (46.82%), Postives = 114/173 (65.90%), Query Frame = 1
Query:   19 MVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDG---VGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFP 528
            ++ SGEGSDE+  GY+YFHKAP+ E+   E+   ++ L+ +D LRA+++T+A GLE RVPFLD  F +  +++ PE ++  P+ G IEK +LR+ F+D     +PK +L+R KE FSDG   V  SW   L+ + E  V D M+ NA   FP NTP TKE YYYR +FER +P
Sbjct:  360 VIFSGEGSDELTQGYIYFHKAPSPEKAEEESERLLRELYLFDVLRADRTTAAHGLELRVPFLDHRFSSYYLSLPPEMRI--PKNG-IEKHLLRETFEDSN--LIPKEILWRPKEAFSDGITSVKNSWFKILQEYVEHQVDDAMMANAAQKFPFNTPKTKEGYYYRQVFERHYP 527          
BLAST of FC923949 vs. ExPASy Swiss-Prot
Match: ASNS_HUMAN (Asparagine synthetase [glutamine-hydrolyzing] OS=Homo sapiens GN=ASNS PE=1 SV=4)

HSP 1 Score: 154.836 bits (390), Expect = 3.042e-37
Identity = 81/173 (46.82%), Postives = 114/173 (65.90%), Query Frame = 1
Query:   19 MVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDG---VGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFP 528
            ++ SGEGSDE+  GY+YFHKAP+ E+   E+   ++ L+ +D LRA+++T+A GLE RVPFLD  F +  +++ PE ++  P+ G IEK +LR+ F+D     +PK +L+R KE FSDG   V  SW   L+ + E  V D M+ NA   FP NTP TKE YYYR +FER +P
Sbjct:  360 VIFSGEGSDELTQGYIYFHKAPSPEKAEEESERLLRELYLFDVLRADRTTAAHGLELRVPFLDHRFSSYYLSLPPEMRI--PKNG-IEKHLLRETFEDSN--LIPKEILWRPKEAFSDGITSVKNSWFKILQEYVEHQVDDAMMANAAQKFPFNTPKTKEGYYYRQVFERHYP 527          
BLAST of FC923949 vs. ExPASy Swiss-Prot
Match: ASNS_RAT (Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus GN=Asns PE=2 SV=3)

HSP 1 Score: 154.066 bits (388), Expect = 5.189e-37
Identity = 84/180 (46.67%), Postives = 115/180 (63.89%), Query Frame = 1
Query:   19 MVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDG---VGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLT 549
            ++ SGEGSDE+  GY+YFHKAP+ E+   E+   +K L+ +D LRA+++T+A GLE RVPFLD  F +  +++ PE ++  P++G IEK +LR+ F+D     LPK +L+R KE FSDG   V  SW   L+   E  V D M+  A   FP NTP TKE YYYR IFE  +P  +  LT
Sbjct:  360 VIFSGEGSDELTQGYIYFHKAPSPEKAEEESERLLKELYLFDVLRADRTTAAHGLELRVPFLDHRFSSYYLSLPPEMRI--PKDG-IEKHLLRETFEDSN--LLPKEILWRPKEAFSDGITSVKNSWFKILQDFVEHQVDDAMMSEASQKFPFNTPQTKEGYYYRQIFEHHYPGRADWLT 534          
The following BLAST results are available for this feature:
BLAST of FC923949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
ASNS_MAIZE2.534e-9278.50Asparagine synthetase [glutamine-hydrolyzing] OS=Z... [more]
ASNB_ECOLI1.266e-6762.19Asparagine synthetase B [glutamine-hydrolyzing] OS... [more]
ASNS2_YEAST1.892e-6362.77Asparagine synthetase [glutamine-hydrolyzing] 2 OS... [more]
ASNS_DICDI7.191e-6361.70Probable asparagine synthetase [glutamine-hydrolyz... [more]
ASNS1_YEAST3.021e-6160.64Asparagine synthetase [glutamine-hydrolyzing] 1 OS... [more]
ASNS_SCHPO2.477e-5560.54Probable asparagine synthetase [glutamine-hydrolyz... [more]
ASNS_CRIGR1.046e-3747.22Asparagine synthetase [glutamine-hydrolyzing] OS=C... [more]
ASNS_PONAB3.042e-3746.82Asparagine synthetase [glutamine-hydrolyzing] OS=P... [more]
ASNS_HUMAN3.042e-3746.82Asparagine synthetase [glutamine-hydrolyzing] OS=H... [more]
ASNS_RAT5.189e-3746.67Asparagine synthetase [glutamine-hydrolyzing] OS=R... [more]

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Properties
Property NameValue
Genbank descriptionC31710H02EF StrClemenN Citrus clementina cDNA clone C31710H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923949 ID=FC923949; Name=FC923949; organism=Citrus clementina; type=EST; length=605bp
AAATCTCTAGGAGTGAAGATGGTGATATCGGGTGAGGGATCTGATGAGAT
TTTTGGTGGCTATTTGTACTTCCACAAGGCACCCAATAAGGAAGAATTCC
ACCGCGAAACATGTCACAAGATAAAGGCTCTCCACCAGTATGATTGCTTG
AGAGCTAACAAATCAACATCTGCTTGGGGTCTAGAAGCACGAGTCCCCTT
CCTTGACAAAGATTTTATTAATGTAGCAATGGCCATTGATCCTGAGTGGA
AGATGATTAATCCTCAAGAAGGACGTATCGAGAAGTGGATCCTTAGGAAG
GCCTTCGATGATGAGGAGCGACCCTATCTGCCAAAGCATGTTCTGTACAG
ACAGAAGGAACAATTCAGTGATGGTGTTGGCTATAGTTGGATTGATGGCC
TCAAAGCACATGCTGAACAACATGTGACTGATAAAATGGTGCAAAATGCT
CAATACATCTTCCCACACAACACACCTTTGACTAAAGAAGCCTACTACTA
CAGAATGATTTTCGAGAGGTTCTTTCCACAGAATTCAGCCAGGCTAACTG
TCCCAGGAGGTGCGAGTGTAGCATGCAGCACGGNCTAAGCTGTCGAATGG
GATGC
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