FC923953

Overview
NameFC923953
Unique NameFC923953
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923953 vs. ExPASy Swiss-Prot
Match: AB41G_ARATH (ABC transporter G family member 41 OS=Arabidopsis thaliana GN=ABCG41 PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 5.703e-50
Identity = 90/220 (40.91%), Postives = 139/220 (63.18%), Query Frame = 2
Query:    2 ASFWKQYWSYWRNPQYNAIRFLMTATIAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFTLYGMMIVALTPGQQVATIVLSFFLALWNLFAGFMIPREEIPVWWRWYYWLSPVAWNLYGLVTCQVGDIETLVQI 661
            A  WKQ+ SYWRNP +N  R +     ++   LLFW K +  + QQDL ++ G+MY++ +F G  N  + +  I  ER V+YRER A M+S+ +Y+  QV VE+ Y   Q+++  +I+Y MIG+   + K F   Y ++ S +IF   GM++VALTP   +A  + S F ++ NLFAGF++P+++IP WW W Y+LSP +W L GL++ Q GD+E  + +
Sbjct: 1126 ACLWKQHCSYWRNPSHNLTRIVFILLNSLLCSLLFWQKAKDINNQQDLFSIFGSMYTIVIFSGINNCATVMNFIATERNVFYRERFARMYSSWAYSFSQVLVEVPYSLLQSLLCTIIVYPMIGYHMSVYKMFWSLYSIFCSLLIFNYCGMLMVALTPNIHMALTLRSTFFSMVNLFAGFVMPKQKIPKWWIWMYYLSPTSWVLEGLLSSQYGDVEKEITV 1345          

HSP 2 Score: 67.3958 bits (163), Expect = 8.902e-11
Identity = 44/199 (22.11%), Postives = 93/199 (46.73%), Query Frame = 2
Query:   50 NAIRFLMTATIAIFFGLLFWDKGQKSSRQQDLQN---LLGAMYSVCLFL------GTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFTLYGMMIVALTPGQQVATIVLSFFLALWNLFAGFMIPREEIPVWWRWYYWLSPVAWNLYGL 619
            N+  +L  + + +F  L+      ++   +D ++   L+G+M++    L        T  +S + V C ++ +Y+       + A +YA+  + + I      + ++ ++ Y +IG+  E+G+FF  F  +    +        I ++       +I  +  + L  LF GF+IP+  +P W  W +WLSP+++   GL
Sbjct:  505 NSFIYLFKSGLLVFNALVTMTVFLQAGATRDARHGNYLMGSMFTALFRLLADGLPELTLTISRLGVFCKQKDLYF-------YPAWAYAIPSIILRIPLSVLDSFIWTVLTYYVIGYSPEVGRFFRHFIILLTFHLSCISMFRAIASICRTFVACSITGAISVLLLALFGGFVIPKSSMPTWLGWGFWLSPLSYAEIGL 696          
BLAST of FC923953 vs. ExPASy Swiss-Prot
Match: ABCG2_DICDI (ABC transporter G family member 2 OS=Dictyostelium discoideum GN=abcG2 PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 4.408e-18
Identity = 52/206 (25.24%), Postives = 105/206 (50.97%), Query Frame = 2
Query:   35 RNPQYNAIRFLMTATIAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELG--KFFLFFYFMWASFVIFTLYGMMIVALTPGQQVATIVLSFFLALWNLFAGFMIPREEIPVWWRWYYWLSPVAWNLYGLVTCQVGDIE 646
            R  Q    R + +  + +  G LF    +    Q+++ N +  ++   +F G  + +S+IP++ +ER V+YRE+A+GM+S   Y    +  ++ +V    ++Y + +Y + G + +     FF   +  + ++  F++  M+   + P  ++A  +    L++ +LFAGFMIP   I   W W+Y L P  + L  ++  +  D+E
Sbjct: 1050 RRVQNIRTRLMRSLFLGVVLGTLFV---RMEETQENIYNRVSILFFSLMF-GGMSGMSSIPIVNMERGVFYREQASGMYSIPIYLFTFIVTDLPWVFLSAIIYTVPMYFISGLRLDPNGAPFFYHSFISFTTYFNFSMLAMVFATVLPTDEIAHALGGVALSISSLFAGFMIPPASIAKGWHWFYQLDPTTYPLAIVMINEFQDLE 1251          

HSP 2 Score: 90.5077 bits (223), Expect = 9.819e-18
Identity = 49/190 (25.79%), Postives = 93/190 (48.95%), Query Frame = 2
Query:   56 IRFLMTATIAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFTLYGMMIVALTPGQQVATIVLSFFLALWNLFAGFMIPREEIPVWWRWYYWLSPVAWNLYGLVT 625
            +R + +  + +  G LF+        Q D  N  G ++   LF+   + + AI ++  +R V+Y ++    +   ++ L  +  EI     +TV++ +++Y M G +    KF  F    +   + F  +  M+ A  P   +A+++    LA + LF+GFM P+  I  WW W YW+SP+ +   GL++
Sbjct:  396 MRIIKSIVMGLILGSLFYGL---DLNQTDGNNRSGLIFFSLLFI-VFSGMGAIAILFEQREVFYIQKDGKYYKTFAFFLSLIFSEIPIALLETVVFCVLVYWMCGLQANAEKFIYFLLMNFVGDLAFQSFFKMVSAFAPNATLASVIAPAALAPFILFSGFMAPKRSIGGWWIWIYWISPIKYAFEGLMS 581          
BLAST of FC923953 vs. ExPASy Swiss-Prot
Match: ABCGI_DICDI (ABC transporter G family member 18 OS=Dictyostelium discoideum GN=abcG18 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.852e-16
Identity = 53/197 (26.90%), Postives = 100/197 (50.76%), Query Frame = 2
Query:   80 IAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFK-----WELGKFFLFFYFMWASFVIFTLYGMMIVALT---PGQQVATIVLSFFLALWNLFAGFMIPREEIPVWWRWYYWLSPVAWNLYGLVTCQVGDIE 646
            + +  G LF    +    Q D+ N +  ++   +F G    +S IP +  ER V+YRE+A+GM+    Y L  V  ++ +V   +  YV+ +Y + G       W+      FFY  + S +++  +G+  +A     P +++A ++    L++ +LFAGFMIP   +P  W+W ++L  +++ L   +  +  D+E
Sbjct: 1217 LGLVIGTLFL---RLDKEQNDVFNRISFLFFSLMFGGMAG-LSIIPTVSTERGVFYREQASGMYRVWIYYLTFVLSDLPFVIITSYAYVIPVYFLTGLSLSNHGWD------FFYHSFISVMLYLNFGLTSIAFATSLPVEEMAFLLNGVLLSVTSLFAGFMIPPPSMPAAWKWAFYLDFISYPLKAFLITEFKDME 1403          

HSP 2 Score: 73.9442 bits (180), Expect = 9.511e-13
Identity = 45/189 (23.81%), Postives = 81/189 (42.86%), Query Frame = 2
Query:   56 IRFLMTATIAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFTLYGMMIVALTPGQQVATIVLSFFLALWNLFAGFMIPREEIPVWWRWYYWLSPVAWNLYGLV 622
            +R L    I    G L+W   +  + Q D  N  G ++   L         +I V   +R V+Y ERA   ++ ++Y L  +  ++     + +++   +Y M G      +F  FF       V+       + + T  +  A+ +    ++ + L  G+M    EIP WW W YW+SP+ +   GL+
Sbjct:  453 LRLLKNVIIGFILGTLYW---KLDTTQADGSNRSGLLF-FSLLTFVFGGFGSISVFFDQRQVFYSERAWKYYNTITYFLSMIVTDLPMSIVEVLIFSNFVYWMTGLNKTWDRFIYFFLTCLVCDVMSLSIIRSVCSFTKTKYAASAISPAVVSPFILMCGYMKHSNEIPGWWIWLYWISPIHYGFEGLL 637          
BLAST of FC923953 vs. ExPASy Swiss-Prot
Match: ABCGG_DICDI (ABC transporter G family member 16 OS=Dictyostelium discoideum GN=abcG16 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.190e-16
Identity = 43/194 (22.16%), Postives = 95/194 (48.97%), Query Frame = 2
Query:   59 RFLMTATIAIFFGLLFW--DKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFTLYGMMIVALTPGQQVATIVLSFFLALWNLFAGFMIPREEIPVWWRWYYWLSPVAWNLYGLVTCQV 634
            R + ++ + +  G LF+  D  QKS+      NLL ++    L      +++ +  +  ER V+Y ++    + +++Y    +  ++I+     +++  I Y +IG      +FF F   ++    +      M+   +P   +A+ +   + +L+ L AG++I R  IP++WRW +++SP  W    +++ Q+
Sbjct:  518 RVIKSSLLGLLIGTLFFQLDSSQKSA------NLLPSLSFFLLTFVVFGSLAGVGQVFSERPVFYDQKIGKYYKSIAYFFAGLVSDLIWNFIDVIIFCSISYWLIGLNHSADRFFFFLLAIYLLDCLVNRVSKMVSIYSPNAAIASTIAPLYFSLFLLMAGYLIHRNSIPIYWRWMHYISPFKWVFEAILSNQL 705          

HSP 2 Score: 68.5514 bits (166), Expect = 3.996e-11
Identity = 33/178 (18.54%), Postives = 90/178 (50.56%), Query Frame = 2
Query:   59 RFLMTATIAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFTLYGMMIVALTPGQQVATIVLSFFLALWNLFAGFMIPREEIPVWWRWYYWLS 592
            R + +  +++  G L+    Q  + Q  + + +  ++    F  + + +S IP +  +R ++Y E  +  +  LSY L  +  ++ +    ++++   +Y ++G + ++ KF  F +  +    +   +  ++  ++P    A  +     ++++LFAGF+I +++IP +++W  ++S
Sbjct: 1254 RIIRSILLSVVTGTLYL---QLKNDQDGVMDRISFIFFTSTF-ASISCLSNIPTVFEDRFLFYHELNSNTYRHLSYILAMILADLPFTIMYSLLFSAPIYWIVGLQNDVDKFLFFIFVYYLYLQVLVSFSQLLGMVSPTLATANEITGISFSVFSLFAGFIIKKDDIPSYYKWLNYVS 1427          
BLAST of FC923953 vs. ExPASy Swiss-Prot
Match: ABCGC_DICDI (ABC transporter G family member 12 OS=Dictyostelium discoideum GN=abcG12 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.200e-15
Identity = 67/239 (28.03%), Postives = 108/239 (45.19%), Query Frame = 2
Query:    2 ASFWKQYWSY----WRNPQYNAIRFLMTATIAIFFGLLFWD--KGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFL-----FFYFMWASFVIFTLYGMMIVALTPGQQVATIVLSFFLALWNLFAGFMIPREEIPVWWRWYYWLSPVAWNLYGLVTCQVGDIE---TLVQIPDGTS 676
            AS+  QYW      W++   N   F+     A+  GLLF     G K + + D+Q +LG ++ +   L  T   + I +    RT++  ERA+ ++ +  Y +  V VE + V    ++   I Y     +W  G FF      FF  + + F+I T     I  LT    +     S    ++ LFAGF +P  E+P  + W +W++P+ ++   LV  Q  D+    T   IP G S
Sbjct:  352 ASWGYQYWILLGRTWKDFLRNQGNFVARVGTAVVTGLLFGVCFAGLKET-EADVQKILGTIFFLITGLNLT-PFAVISLFLSGRTLFNAERASKIYHSFPYYMAMVTVETLIVFLVALINAAICYLFAHLRWTAGHFFFAIMVYFFVHLLSDFMIST-----IANLTGTSDMTFAYGSGLSVIYMLFAGFYVPTNELPKSFGWLHWVNPLFYSFVSLVVNQFEDLPLECTRPNIPVGNS 583          
BLAST of FC923953 vs. ExPASy Swiss-Prot
Match: ABCG5_DICDI (ABC transporter G family member 5 OS=Dictyostelium discoideum GN=abcG5 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.200e-15
Identity = 53/197 (26.90%), Postives = 89/197 (45.18%), Query Frame = 2
Query:   50 NAIRFLMTATIAIFFGLL----FWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFTL---YGMMIVALTPGQQVATIVLSFFLALWNLFAGFMIPREEIPVWWRWYYWLSPVAWNLYGL 619
            N   F       IFFGLL    +W  G   S   +   LL  + +  +F    ++ +A+     ER V+Y ++A   +   +Y +  +  +I     +   +  I+Y +   +     F  F YFM   F+   L   +  M  A++P  ++A +  S  L++W LF+GF  P+ +I  WW W Y++SP  W   GL
Sbjct:  474 NYYNFATRVFKGIFFGLLLGTLYWRIGHNQSGGMERFGLLFFIMTTIIF----SSFAAVNSFFGERKVFYSQKALHYYKTGAYFISSIICDIPAGLIEVAFFGPIVYWLANLR---PVFIRFVYFMILLFITDNLSLSFAKMCAAISPTIEIANVTASVILSIWLLFSGFTAPKNDIGGWWIWLYYISPYTWIFQGL 663          

HSP 2 Score: 73.9442 bits (180), Expect = 9.511e-13
Identity = 47/204 (23.04%), Postives = 92/204 (45.10%), Query Frame = 2
Query:   14 KQYWSYWRNPQYNAIRFLMTATIAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFK--WELGKFFLFFYFMWASFVIFTLYGMMIVALTPGQQVATIVLSFFLALWNLFAGFMIPREEIPVWWRWYYWLSPVAWNLYGL 619
            + + S  R P       L +  +A+  G LF    +    Q+D ++ +  ++   LF G   A+  IP   +ER V+YRE  AG + + +Y +  V     ++ +  ++Y++  + + G        KF+   +    +++++  + + +    P + +A+ +    L+L  LF GF+I R   P     YYW   + W  Y L
Sbjct: 1225 RSWLSRLRRPAIFVSNCLRSILLAVLLGTLFV---RMDYEQKDARSRVSLLFFSFLFAGMV-AIGNIPTTVLERGVFYREVTAGFYHSTAYMISYVLTSYPFILSTGILYIIPTFWIAGLDSGRHSSKFWYCLFIFIITYIMYDAFALCLAVCLPNEVMASTICGIGLSLATLFGGFVIARPNYP---SAYYWCHYLDWLRYPL 1421          
BLAST of FC923953 vs. ExPASy Swiss-Prot
Match: ABCG6_DICDI (ABC transporter G family member 6 OS=Dictyostelium discoideum GN=abcG6 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.568e-15
Identity = 49/194 (25.26%), Postives = 88/194 (45.36%), Query Frame = 2
Query:   50 NAIRFLMTATIAIFFGLL----FWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFTLYGMMIVALTPGQQVATIVLSFFLALWNLFAGFMIPREEIPVWWRWYYWLSPVAWNLYGL 619
            N   FL      IFFGLL    +W  G   S   +   LL  +    +F    ++ +A+     ER V+Y ++A   +   +Y +  +  +I     +   +  I+Y +   +    +F  F   +  +  +   +  M  A++P  ++A ++ S  L++W LF+GF  P+ +I  WW W Y++SP  W   GL
Sbjct:  483 NYYNFLTRVAKGIFFGLLLGTLYWRIGHNQSGGMERFGLLFFIMVTIIF----SSFAAVNSFFGERKVFYSQKALYYYKTGAYFISSIICDIPAGILEVAFFGPIVYWLANLRPVFIRFVYFMLLLIMTDNLSLSFAKMCAAISPTIEIANVIASVILSIWLLFSGFTAPKNDIGGWWIWLYYISPYTWIFQGL 672          

HSP 2 Score: 73.559 bits (179), Expect = 1.242e-12
Identity = 48/204 (23.53%), Postives = 91/204 (44.61%), Query Frame = 2
Query:   14 KQYWSYWRNPQYNAIRFLMTATIAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFK--WELGKFFLFFYFMWASFVIFTLYGMMIVALTPGQQVATIVLSFFLALWNLFAGFMIPREEIPVWWRWYYWLSPVAWNLYGL 619
            + + S  R P       + +  +A+  G LF    +    Q+D ++ +  ++   LF G   A+  IP   +ER V+YRE  AG + + +Y    V     +  +  ++Y++  + + G        KF+   +    ++V++  +G+ +    P + +A+ +    L+L  LF GF+I R   P     YYW   + W  Y L
Sbjct: 1250 RSWLSRLRRPAIFVSNCIRSILLAVLLGTLFV---RMDYEQKDARSRVSLLFFSFLFAGMV-AIGNIPTTVLERGVFYREVTAGFYHSTAYMTSYVLTSYPFTLSTGILYIIPTFWIAGLDSGRHSSKFWYCLFIFIITYVMYDAFGLCLAVCLPNEVMASTICGIGLSLSTLFGGFVIARPNYP---SAYYWCHYLDWLRYPL 1446          
BLAST of FC923953 vs. ExPASy Swiss-Prot
Match: ABCGL_DICDI (ABC transporter G family member 21 OS=Dictyostelium discoideum GN=abcG21 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.016e-14
Identity = 46/199 (23.12%), Postives = 96/199 (48.24%), Query Frame = 2
Query:   59 RFLMTATIAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFM----WASFVIFTLYGMMIVALTPGQQVATIVLSFFLALWNLFAGFMIPREEIPVWWRWYYWLSPVAWNLYGLVTCQVGDI 643
            R+L   T +  +G +F+   Q       L    GA++S  LF    +    +P+    R +  ++R+  M+   +  + Q+  +I     Q  ++ +++Y M G ++  GKFF+F + +     A+  +F ++G    +L   Q V  ++L F +     + G+ IP+ ++  W+ W+YW +P ++    L+  + GD+
Sbjct:  497 RYLSVFTQSFVYGSIFF---QMEKTIPGLFTRGGAIFSAILFNAFLSEAE-LPLTMYGRRILQKQRSYAMYRPSALHIAQIVTDIPLTMIQVFLFSIVVYFMFGLQYNAGKFFIFCFTLVGATLATTNLFRVFGNFSPSLYISQNVMNVILIFMIT----YCGYTIPKPKMHPWFAWFYWANPFSYAFKALMANEFGDL 687          

HSP 2 Score: 80.4925 bits (197), Expect = 1.016e-14
Identity = 49/202 (24.26%), Postives = 92/202 (45.54%), Query Frame = 2
Query:   29 YWRNPQYNAIRFLMTATIAIFFGLLFWD-KGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFTL-YGMMIVALTPGQQVATIVLSFFLALWNLFAGFMIPREEIPVWWR-WYYWLSPVAWNLYGLVT 625
            +WR+P Y    F+ +A   +  G  FW  +G  S   Q +  +  A     L LG       +P   +++  + R+ A+  +S   +A+  V VE+ ++T    ++    +   G   E      +F+F++  F+ F + +G  + A+     +A  ++   +    LF G M+    IP +WR W Y L+P  + + G+VT
Sbjct: 1147 WWRDPFYTYGSFIQSALAGLIIGFTFWSLQGSSSDMNQRVFFIFEA-----LILGILLIFVVLPQFIMQKEYFKRDFASKFYSWFPFAISIVVVELPFITVSGTIFFFCSFWTAGLNTEYNDINFYFWFIFILFLYFCVSFGQAVAAICFNMFLAHTLIPLLIVFLFLFCGVMVIPSSIPTFWRGWVYHLNPCRYFMEGIVT 1343          
BLAST of FC923953 vs. ExPASy Swiss-Prot
Match: ABCGA_DICDI (ABC transporter G family member 10 OS=Dictyostelium discoideum GN=abcG10 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.956e-14
Identity = 53/216 (24.54%), Postives = 97/216 (44.91%), Query Frame = 2
Query:    5 SFWKQYWS--------YWRNPQYNAIRFLMTATIAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFTL-YGMMIVALTPGQQVATIVLSFFLALWNLFAGFMIPREEIPVWWRWYYWLSPVAWNLYGLVT 625
            S W Q W         +WR+  Y    F   A   +  G  FW+    SS   D+   +  ++ + LFLG      AIP   +++  + ++ A+  +S   +A+  V VE+ +V     +     +   G  +  G++  +FY  +  F+   +  G ++ A      +A  +L   L +  LF G ++P E+IP +W++ Y  +P  + L G+VT
Sbjct: 1156 SIWYQTWEVYKRLNLIWWRDMSYVYGIFTQAAASGLIIGFTFWNLDLSSS---DMNQRVFFIFEI-LFLGILYIFIAIPQFLIQKAYFKKDYASKFYSWCPFAISIVIVELPFVAVAGTICFFCSFWTAGIYYN-GEYDFYFYITFILFLFICVSLGQVVSAFCFNVMLAQTILPLLLVMLFLFCGVLVPYEQIPNFWKFVYHSNPCRYFLEGVVT 1366          

HSP 2 Score: 77.411 bits (189), Expect = 8.602e-14
Identity = 39/167 (23.35%), Postives = 84/167 (50.30%), Query Frame = 2
Query:  143 LQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFTLYGMMIVALTPGQQVATIVLSFFLALWNLFAGFMIPREEIPVWWRWYYWLSPVAWNLYGLVTCQVGDI 643
            L N  GA+Y+  LF    +A   + +    R +  ++ +  M+   +  +  V  +I     Q  ++ +I+Y M G + + GKFF+F + ++ S +    +   +  L+P   V+  +L+ F+     + G+ IP+ ++  W+ WY+W++P ++    L+  + GD+
Sbjct:  531 LFNRGGAIYAAILFNAFVSA-GELGLTFYGRRILQKQHSYAMYRPSALHIAMVITDIPLTAIQVTIFSVIVYFMYGLQVDAGKFFIFLFTIFGSTLSMVAFFRALGNLSPSLYVSQNILNVFILFMFTYGGYSIPKNKMHPWFSWYFWINPFSFPYKALMANEFGDM 696          
BLAST of FC923953 vs. ExPASy Swiss-Prot
Match: ABCGB_DICDI (ABC transporter G family member 11 OS=Dictyostelium discoideum GN=abcG11 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.861e-14
Identity = 49/203 (24.14%), Postives = 93/203 (45.81%), Query Frame = 2
Query:   29 YWRNPQYNAIRFLMTATIAIFFGLLFWD-KGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGF-KWELGKFFLFFYFMWASFVIFTL-YGMMIVALTPGQQVATIVLSFFLALWNLFAGFMIPREEIPVWWR-WYYWLSPVAWNLYGLVT 625
            +WR+P Y    F+  A   +  G  FW+ +G  S   Q +  +  A     L LG       +P + ++R  + R+ A+  +S   +A+  V VE+ ++     ++    +   G  K    +   +F+F++  F+ F + +G  + A+      A  ++   +    LF G M+P   IP +WR W Y L+P  + + G++T
Sbjct: 1139 WWRDPYYTYGSFVQAALCGLIIGFTFWNLQGSSSDMNQRIFFIFEA-----LMLGILLIFVVMPQLIIQREYFKRDFASKFYSWFPFAISIVVVELPFIVISGTIFFFCSFWTAGLHKTSDDEQTFYFWFIFIIFMFFCVSFGQAVAAVCINMFFAMTLIPLLIVFLFLFCGVMVPPSSIPTFWRGWVYHLNPCRYFMEGIIT 1336          
The following BLAST results are available for this feature:
BLAST of FC923953 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
AB41G_ARATH5.703e-5040.91ABC transporter G family member 41 OS=Arabidopsis ... [more]
ABCG2_DICDI4.408e-1825.24ABC transporter G family member 2 OS=Dictyostelium... [more]
ABCGI_DICDI1.852e-1626.90ABC transporter G family member 18 OS=Dictyosteliu... [more]
ABCGG_DICDI9.190e-1622.16ABC transporter G family member 16 OS=Dictyosteliu... [more]
ABCGC_DICDI1.200e-1528.03ABC transporter G family member 12 OS=Dictyosteliu... [more]
ABCG5_DICDI1.200e-1526.90ABC transporter G family member 5 OS=Dictyostelium... [more]
ABCG6_DICDI1.568e-1525.26ABC transporter G family member 6 OS=Dictyostelium... [more]
ABCGL_DICDI1.016e-1423.12ABC transporter G family member 21 OS=Dictyosteliu... [more]
ABCGA_DICDI2.956e-1424.54ABC transporter G family member 10 OS=Dictyosteliu... [more]
ABCGB_DICDI3.861e-1424.14ABC transporter G family member 11 OS=Dictyosteliu... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31710H10EF StrClemenN Citrus clementina cDNA clone C31710H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923953 ID=FC923953; Name=FC923953; organism=Citrus clementina; type=EST; length=724bp
GGCTTCTTTCTGGAAACAGTATTGGTCTTACTGGAGAAATCCTCAATACA
ATGCTATTCGATTTCTCATGACTGCCACCATCGCCATTTTCTTCGGTCTT
CTCTTCTGGGACAAAGGACAGAAGAGTTCCAGACAACAGGATCTACAGAA
TCTTTTAGGAGCTATGTATTCGGTTTGTCTTTTCCTTGGGACCACCAATG
CCGTGTCTGCGATACCTGTTATCTGTGTTGAGAGAACGGTATACTACCGT
GAAAGAGCAGCCGGGATGTTTTCTGCATTGTCTTATGCACTTGGTCAAGT
TGCAGTAGAGATAATATATGTGACAGCTCAAACTGTCATGTATGTTCTTA
TCCTTTACTCGATGATAGGATTCAAGTGGGAGCTGGGAAAATTCTTCTTG
TTCTTCTACTTCATGTGGGCGTCTTTTGTCATTTTCACATTGTACGGAAT
GATGATTGTCGCATTGACTCCTGGCCAGCAAGTTGCTACCATTGTCTTGT
CCTTCTTCCTTGCACTATGGAACTTGTTCGCCGGTTTCATGATTCCCAGA
GAGGAAATTCCTGTCTGGTGGAGGTGGTACTACTGGCTTTCTCCGGTGGC
TTGGAATCTGTATGGCCTTGTGACTTGTCAAGTTGGTGACATAGAGACAC
TGGTGCAGATCCCTGATGGCACTTCATGACAGTGAAGCATTTGTCAAGAT
AATACGATACAGACTANTTCCTTC
back to top