FC923953
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923953 vs. ExPASy Swiss-Prot
Match: AB10G_ARATH (ABC transporter G family member 10 OS=Arabidopsis thaliana GN=ABCG10 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.242e-12 Identity = 43/187 (22.99%), Postives = 85/187 (45.45%), Query Frame = 2 Query: 32 WRNPQYNAIRFLMTATIAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFTLYGMMIVALTPGQQVATIVLSFFLALWNLFAGFMIPREEIPVWWRWYYWLS 592 +R Q R L + + G ++ + G + + L+ A L TT +P+ +R + RE + + LSY L + I ++ ++++ +Y ++G + EL F F +W ++ + AL P + T V+S + + LF+G+ I ++ IPV+W + ++LS Sbjct: 346 FRTKQLFTTRALQASIAGLILGSIYLNVGNQKKEAKVLRTGFFAFILTFLLSSTTEG---LPIFLQDRRILMRETSRRAYRVLSYVLADTLIFIPFLLIISMLFATPVYWLVGLRRELDGFLYFSLVIWIVLLMSNSFVACFSALVPNFIMGTSVISGLMGSFFLFSGYFIAKDRIPVYWEFMHYLS 529
BLAST of FC923953 vs. ExPASy Swiss-Prot
Match: CDR3_CANAL (Opaque-specific ABC transporter CDR3 OS=Candida albicans GN=CDR3 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.622e-12 Identity = 58/229 (25.33%), Postives = 106/229 (46.29%), Query Frame = 2 Query: 2 ASFWKQY--------WSYWRNPQYNAIRFLMTATIAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYY-RERAAGMFSALSYALGQVAVEIIY-VTAQTVMYVLILYSMIGFKWEL------GKFFLFFYFMWASFVIFTLYGMMIVALTPGQQVATIVLSFFLALWNLFAGFMIPREEIPVWWRWYYWLSPVAWNLYGLVTCQVGD 640 ASFWKQY YWR P Y +F M ++F G ++ K Q S Q L+N + +++S+ + L TT A +P+ +R +Y RER + FS L++ Q+ EI Y V A T+ + Y + ++ + + L + M F+ + ++ A +S L + +F G + ++ +P +W + Y +P+ + +++ +GD Sbjct: 1153 ASFWKQYIFVVHRLFQQYWRTPSYIYSKFAMAVLCSLFNGFTYY-KSQNS--MQGLKNQMLSIFSMFVVL-TTLAQQYVPLFVTQRDLYEARERPSKTFSWLAFIAAQITAEIPYQVLAATISFFSWYYPVGLYRNAVYSGAVTHRGVLMWLIMTLMFIYSSTLAQFCISWNQLADYAANWISLLLTISMIFCGVIATKDSMPKFWVFLYRCTPLTYLTSAMMSIGLGD 1377
BLAST of FC923953 vs. ExPASy Swiss-Prot
Match: ABCGO_DICDI (ABC transporter G family member 24 OS=Dictyostelium discoideum GN=abcG24 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.767e-12 Identity = 52/211 (24.64%), Postives = 99/211 (46.92%), Query Frame = 2 Query: 5 SFWKQYW--------SYWRNPQYNAIRFLMTATIAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTA-QTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFTLYGMMIVALTPGQQVATIVLSFFLALWNLFAGFMIPREEIPVWWRWYYWLSPVAWNL 610 SFW Q++ +Y RNP + + + + G LFW ++ + QN GAM+ + L + +++++ + +R ++ RERA G + +Y L +V +II + ++ I Y MIG + + F F + + + + M I ++P A +V L ++ LF GF++ R IP + W+S +++ L Sbjct: 881 SFWTQFFVVCRRSLLNYMRNPFLLRTTYFVHIFVGLTLGYLFWKL--PANLEPGCQNRFGAMFFMTALL-SFGSITSLDLFYNDRIIFIRERANGFYRTSAYFLAKVVTDIIPMRVIPPIILGSICYYMIGLRPGILHFIYFLISLVLTSTVASSMCMAISTISPTFGTANMVSILLLFVFLLFDGFLLARSSIPKYLIGLVWISFMSYGL 1088
BLAST of FC923953 vs. ExPASy Swiss-Prot
Match: PDR5_YEAST (Pleiotropic ABC efflux transporter of multiple drugs OS=Saccharomyces cerevisiae GN=PDR5 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.614e-12 Identity = 56/221 (25.34%), Postives = 99/221 (44.80%), Query Frame = 2 Query: 20 YWSYWRNPQYNAIRFLMTATIAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAV--SAIPVICVERTVYY-RERAAGMFSALSYALGQVAVEIIY-VTAQTVMYVLILY--------SMIGFKWELGKFFLFFYFMWASFVIFTLYGMMIVALTPGQQVATIVLSFFLALWNLFAGFMIPREEIPVWWRWYYWLSPVAWNLYGLVTCQVGDIE 646 + YWR+P Y +F++T +F G F+ G LQ L M +V +F N + +P +R +Y RER + FS +S+ Q+ VE+ + + A T+ Y + Y S G E G LF+ F A +V G+++++ + A + S + F G M +P +W + Y +SP+ + + L+ V +++ Sbjct: 1196 FQQYWRSPDYLWSKFILTIFNQLFIGFTFFKAGTS------LQGLQNQMLAVFMFTVIFNPILQQYLPSFVQQRDLYEARERPSRTFSWISFIFAQIFVEVPWNILAGTIAYFIYYYPIGFYSNASAAGQLHERGA--LFWLFSCAFYVYVGSMGLLVISFNQVAESAANLASLLFTMSLSFCGVMTTPSAMPRFWIFMYRVSPLTYFIQALLAVGVANVD 1408
BLAST of FC923953 vs. ExPASy Swiss-Prot
Match: AB6G_ARATH (ABC transporter G family member 6 OS=Arabidopsis thaliana GN=ABCG6 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.165e-12 Identity = 47/202 (23.27%), Postives = 87/202 (43.07%), Query Frame = 2 Query: 35 RNPQYNAIRFLMTATIAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFTLYGMMIVALTPGQQVATIVLSFFLALWNLFAGFMIPREEIPVWWRWYYWLSPVAWNLYGLVTCQVGD 640 R P+ IR +FW Q + + +Q LG ++ + A+PV ER ++ RE A + SY L V + + ++ + I + +G L F +F + ASF + + + + P + ++ LA + LF+GF I R+ IP +W W++++S V + ++ + GD Sbjct: 436 RQPELFGIRLGAVLVTGFILATMFW---QLDNSPKGVQERLGC-FAFAMSTTFYTCADALPVFLQERFIFMRETAYNAYRRSSYVLSHSLVALPSLIILSLAFAAITFWGVGLDGGLMGFLFYFLVILASFWAGSSFVTFLSGVVPHVMLGYTIVVAILAYFLLFSGFFINRDRIPGYWIWFHYISLVKYPYEAVLLNEFGD 633
BLAST of FC923953 vs. ExPASy Swiss-Prot
Match: ABCG8_DICDI (ABC transporter G family member 8 OS=Dictyostelium discoideum GN=abcG8 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.051e-12 Identity = 56/218 (25.69%), Postives = 97/218 (44.50%), Query Frame = 2 Query: 17 QYWSY----WRNPQYNAIRFLMTATIAIFFGLLFWD--KGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFV--IFTLYGMMIVALTPGQQVATIVLSFFLALWNLFAGFMIPREEIPVWWRWYYWLSPVAWNLYGLVTCQVGDIE 646 QYW WR N L AI G LF G K S D+Q ++G ++ + L + S I + R ++ ERA+ ++ + Y L + VE+ T++ V + Y + + + G+FF F + SF+ + T + + LT + S ++ LFAGF +P E+P + W +W++P + +V Q D++ Sbjct: 356 QYWILLNREWRGFIRNKGNALSRVITAIVIGALFGSCFAGLKES-DADVQKIMGTLFFLTTGL-MLSPFSMITLFLSGRQLFNSERASKIYHSFPYFLSMITVELTIEFFVTLVEVTVCYMLARLRMDAGRFF--FAVLVYSFIHSLSTFFISSLANLTGTSDLTFSYASSLSVVFMLFAGFYVPTNELPRAFGWLHWVNPAFYGYSSVVINQFEDLQ 569
BLAST of FC923953 vs. ExPASy Swiss-Prot
Match: PDR15_YEAST (ATP-dependent permease PDR15 OS=Saccharomyces cerevisiae GN=PDR15 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.794e-11 Identity = 53/220 (24.09%), Postives = 102/220 (46.36%), Query Frame = 2 Query: 20 YWSYWRNPQYNAIRFLMTATIAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAV--SAIPVICVERTVYY-RERAAGMFSALSYALGQVAVEIIY-VTAQTVMYVLILYSMIGFKWELG-------KFFLFFYFMWASFVIFTLYGMMIVALTPGQQVATIVLSFFLALWNLFAGFMIPREEIPVWWRWYYWLSPVAWNLYGLVTCQVGDIE 646 + YWR+P Y +F++T +F G F+ + LQ L M S+ ++ N + +P +R +Y RER + FS L++ L Q+ VEI + + A T+ Y + Y+ +GF + LF+ F A +V G+++++ + A + + + F G M + +P +W + Y +SP+ + + L+ V +++ Sbjct: 1211 FQQYWRSPDYLWSKFILTIFNQVFIGFTFF------KADRSLQGLQNQMLSIFMYTVIFNPILQQYLPSFVQQRDLYEARERPSRTFSWLAFFLSQIIVEIPWNILAGTIAYCIYYYA-VGFYANASAAGQLHERGALFWLFSIAFYVYIGSMGLLMISFNEVAETAAHMGTLLFTMALSFCGVMATPKVMPRFWIFMYRVSPLTYMIDALLALGVANVD 1423
BLAST of FC923953 vs. ExPASy Swiss-Prot
Match: ABCG2_MOUSE (ATP-binding cassette sub-family G member 2 OS=Mus musculus GN=Abcg2 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.794e-11 Identity = 48/193 (24.87%), Postives = 93/193 (48.19%), Query Frame = 2 Query: 38 NPQYNAIRFLMTATIAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTN----AVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVT-AQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFTLYGMMIVALTPGQQV---ATIVLSFFLALWNLFAGFMIPREEIPVWWRWYYWLS 592 NPQ + + ++T + + G +++D ++ +QN G LF TTN +VSA+ + VE+ ++ E +G + SY G+V +++ + +V++ +LY M+G K + FF+ M+ ++ M +A+ GQ V AT++++ LF+G ++ I W W + S Sbjct: 391 NPQASVAQLIVTVILGLIIGAIYFDLKYDAA---GMQNRAGV-----LFFLTTNQCFSSVSAVELFVVEKKLFIHEYISGYYRVSSYFFGKVMSDLLPMRFLPSVIFTCVLYFMLGLKKTVDAFFIM---MFTLIMVAYTASSMALAIATGQSVVSVATLLMTIAFVFMMLFSGLLVNLRTIGPWLSWLQYFS 572
BLAST of FC923953 vs. ExPASy Swiss-Prot
Match: ABCGF_DICDI (ABC transporter G family member 15 OS=Dictyostelium discoideum GN=abcG15 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.343e-11 Identity = 47/203 (23.15%), Postives = 92/203 (45.32%), Query Frame = 2 Query: 29 YWRNPQYNAIRFLMTATIAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFTLY----GMMIVALTPGQQVATIVLSFFLALWNLFAGFMIPREEIPVWWRWYYWLSPVAWNLYGLVT 625 +WR+P Y+ F+ +A + + G F++ ++ D+ + +++V + LG +P ++ + R+ A+ + L +AL + VE+ +V ++ + G + F F W F++F Y G I A+ VA +L + LF G ++ ++IP +W+W Y L+P L +VT Sbjct: 1175 WWRSPGYSYGTFIQSALVGLINGWTFYNLQDSAN---DMNQRIFFIFNVTM-LGILLMFLVLPQFITQQDYFKRDYASKFYHWLPFALSIIVVELPFVLVSGTIFFFCSFWTAGLNSDASTNFFF----WLIFMLFLFYCVGFGQAIGAVCINITVALNLLPVLIIFLFLFCGVLVIPDQIPHFWKWVYHLNPCTHFLEAMVT 1369
BLAST of FC923953 vs. ExPASy Swiss-Prot
Match: ABCG2_PIG (ATP-binding cassette sub-family G member 2 OS=Sus scrofa GN=ABCG2 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.343e-11 Identity = 46/193 (23.83%), Postives = 94/193 (48.70%), Query Frame = 2 Query: 38 NPQYNAIRFLMTATIAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTN----AVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTA-QTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFTLYGMMIVALTPGQ---QVATIVLSFFLALWNLFAGFMIPREEIPVWWRWYYWLS 592 NPQ + + ++T + + G +F+D S +QN G LF TTN +VSA+ ++ VE+ ++ E +G + SY G++ +++ + ++++ I Y ++G K +G FF+ M+ ++ M +A+ GQ VAT++++ +F+G ++ + + W W + S Sbjct: 392 NPQASVAQIIVTIILGLVIGAIFYDLKNDPS---GIQNRAGV-----LFFLTTNQCFSSVSAVELLVVEKKLFIHEYISGYYRVSSYFFGKLLSDLLPMRMLPSIIFTCITYFLLGLKPAVGSFFI---MMFTLMMVAYSASSMALAIAAGQSVVSVATLLMTISFVFMMIFSGLLVNLKTVVPWLSWLQYFS 573 The following BLAST results are available for this feature:
BLAST of FC923953 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923953 ID=FC923953; Name=FC923953; organism=Citrus clementina; type=EST; length=724bpback to top |