FC923953
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923953 vs. ExPASy Swiss-Prot
Match: PDH1_CANGA (ATP-binding cassette transporter CGR1 OS=Candida glabrata GN=PDH1 PE=3 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 3.996e-11 Identity = 52/220 (23.64%), Postives = 99/220 (45.00%), Query Frame = 2 Query: 20 YWSYWRNPQYNAIRFLMTATIAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAV--SAIPVICVERTVYY-RERAAGMFSALSYALGQVAVEIIY-VTAQTVMYVLILYSMIGFKWELGKFF-------LFFYFMWASFVIFTLYGMMIVALTPGQQVATIVLSFFLALWNLFAGFMIPREEIPVWWRWYYWLSPVAWNLYGLVTCQVGDIE 646 + YWR P Y ++++T +F G F+ LQ L M S+ ++ N + +P +R +Y RER + FS ++ L Q+ VE+ + + A T+ Y + YS +GF + LF+ F A +V G+ +++ + A + S + F G M + +P +W + Y +SP+ + + L++ V +++ Sbjct: 1212 FQQYWRTPDYLWSKYILTIFNQLFIGFTFF------KADHTLQGLQNQMLSIFMYTVIFNPLLQQYLPTFVQQRDLYEARERPSRTFSWKAFILAQIVVEVPWNIVAGTLAYCIYYYS-VGFYANASQAHQLHERGALFWLFSIAFYVYVGSLGLFVISFNEVAETAAHIGSLMFTMALSFCGVMATPDAMPRFWIFMYRVSPLTYLIDALLSTGVANVD 1424
BLAST of FC923953 vs. ExPASy Swiss-Prot
Match: ABCG7_DICDI (ABC transporter G family member 7 OS=Dictyostelium discoideum GN=abcG7 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.219e-11 Identity = 46/216 (21.30%), Postives = 96/216 (44.44%), Query Frame = 2 Query: 14 KQYWSYWRNPQYNAIRFLMTATIAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICV-----ERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFTLYGMMIVALTPGQQVATIVLSFFLALWNLFAGFMIPREEIPVWWRWYYWLSPVAWNLYGLVTCQVGDIE 646 + + ++RN R I + F F G S Q+D+ + G ++ + L + IP C+ R V+ ERA+ ++ +L + L + E +++ L++Y++ +W FF+ ++ ++ ++ LY + I +T + I + + LF G ++P +++P + W +WL+P+ YG T V + Sbjct: 552 RNFKDFFRNSTQYITRLSGGFMIGLLFSACF---GTLSPSQEDVLKISGILFFLIAVL------NLIPFTCITLFLSNREVFNSERASKIYHSLPFYLSTITTEAFIQFLVSLIVSLLVYTINHLRWNFSSFFITYFILYLINLLSDLYIIAISNITGKSDLTFIYGTTISITFLLFMGHLVPVKQLPKSFGWIHWLNPL---YYGYATVMVAQFK 755
BLAST of FC923953 vs. ExPASy Swiss-Prot
Match: WHITE_LUCCU (Protein white OS=Lucilia cuprina GN=W PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 6.816e-11 Identity = 47/215 (21.86%), Postives = 92/215 (42.79%), Query Frame = 2 Query: 2 ASFWKQYWSYWRNPQYNAIRFLMTATIAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFTLYGMMIVALTPGQQVATIVLSFFLALWNLFAGFMIPREEIPVWWRWYYWLSPVAWNLYGLVTCQVGDIE 646 A W+ + S + P +R + T +A+ GL+F + + Q + N+ GA++ + N + I V E V+ RE + ++ +Y LG+ E+ +++ I Y MIG + + F + + T +G +I + +A V + LF G + +PV+++W + S + GL+ Q D++ Sbjct: 406 AIMWRSWISTLKEPLLVKVRLIQTTMVAVLIGLIFLN---QPMTQVGVMNINGAIFLFLTNMTFQNVFAVINVFTSELPVFMRETRSRLYRCDTYFLGKTLAELPLFLVVPFLFIAIAYPMIGLRPGITHFLSALALVTLVANVSTSFGYLISCASTSTSMALSVGPPLTIPFLLFGGVFLNSGSVPVYFKWLSYFSWFRYANEGLLINQWADVQ 617
BLAST of FC923953 vs. ExPASy Swiss-Prot
Match: ABCG2_RAT (ATP-binding cassette sub-family G member 2 OS=Rattus norvegicus GN=Abcg2 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.816e-11 Identity = 49/193 (25.39%), Postives = 93/193 (48.19%), Query Frame = 2 Query: 38 NPQYNAIRFLMTATIAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTN----AVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVT-AQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFTLYGMMIVALTPGQ---QVATIVLSFFLALWNLFAGFMIPREEIPVWWRWYYWLS 592 NPQ + + ++T + + G L++ G K+ +QN G + + TTN +VSA+ + VE+ ++ E +G + SY G++ +++ + +V+Y ILY M+G K + FF+ M+ ++ M +A+ GQ VAT++++ LF+G ++ I W W + S Sbjct: 391 NPQASVAQLIVTVILGLIIGALYF--GLKND-PTGMQNRAGVFFFL-----TTNQCFTSVSAVELFVVEKKLFIHEYISGYYRVSSYFFGKLVSDLLPMRFLPSVIYTCILYFMLGLKRTVEAFFI---MMFTLIMVAYTASSMALAIAAGQSVVSVATLLMTISFVFMMLFSGLLVNLRTIGPWLSWLQYFS 572
BLAST of FC923953 vs. ExPASy Swiss-Prot
Match: AB18G_ARATH (ABC transporter G family member 18 OS=Arabidopsis thaliana GN=ABCG18 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.816e-11 Identity = 48/225 (21.33%), Postives = 90/225 (40.00%), Query Frame = 2 Query: 14 KQYWSYW-RNPQYNAIRFLMTATIAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFTLYGMMIVALTPGQQVATIVLSFFLALWNLFAGFMIPREEIPVWWRWYYWLSPVAWNLYGLVTCQVGDIETL----VQIPDGT 673 K+Y W R P+ +R + ++W Q+ S + N IPV ER ++ RE + SY + V + + A ++ + + +G L FF + ++A+F + I L P ++ +V +L+ L GF I R+ IP++W W++++S + + ++ + D VQ+ DGT Sbjct: 409 KRYIKNWIRTPELIGMRIGTVMVTGLLLATVYWRLDNTPRGAQERMGFFAFGMSTMFYCCADN----IPVFIQERYIFLRETTHNAYRTSSYVISHALVSLPQLLALSIAFAATTFWTVGLSGGLESFFYYCLIIYAAFWSGSSIVTFISGLIPNVMMSYMVTIAYLSYCLLLGGFYINRDRIPLYWIWFHYISLLKYPYEAVLINEFDDPSRCFVKGVQVFDGT 629 The following BLAST results are available for this feature:
BLAST of FC923953 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923953 ID=FC923953; Name=FC923953; organism=Citrus clementina; type=EST; length=724bpback to top |