FC924870
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC924870 vs. ExPASy Swiss-Prot
Match: PLCD_HUMAN (1-acyl-sn-glycerol-3-phosphate acyltransferase delta OS=Homo sapiens GN=AGPAT4 PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.260e-25 Identity = 55/152 (36.18%), Postives = 87/152 (57.24%), Query Frame = 3 Query: 168 LFFISGLVVNLIQAVCFVTIRPLSKNTYRRINRXXXXXXXXXXXXXXXXXAGVKIKLFVDRETYRLMGKEHALVVSNHKSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERNWAKDESTLKSGLQRLRDYPQPFW 623 +F SGL++N IQ + + P++K +R+IN +G + +F D Y GKE+A+VV NHK +ID+L GW L++R G LG + + KK ++P+IGW +F+E +F R W +D T+ + LQ LRDYP+ ++ Sbjct: 20 VFIASGLIINTIQLFTLL-LWPINKQLFRKINCRLSYCISSQLVMLLEWWSGTECTIFTDPRAYLKYGKENAIVVLNHKFEIDFLCGWSLSERFGLLGGSKVLAKKELAYVPIIGWMWYFTEMVFCSRKWEQDRKTVATSLQHLRDYPEKYF 170
BLAST of FC924870 vs. ExPASy Swiss-Prot
Match: PLCD_MACFA (1-acyl-sn-glycerol-3-phosphate acyltransferase delta OS=Macaca fascicularis GN=AGPAT4 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.646e-25 Identity = 54/152 (35.53%), Postives = 87/152 (57.24%), Query Frame = 3 Query: 168 LFFISGLVVNLIQAVCFVTIRPLSKNTYRRINRXXXXXXXXXXXXXXXXXAGVKIKLFVDRETYRLMGKEHALVVSNHKSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERNWAKDESTLKSGLQRLRDYPQPFW 623 +F SGL++N +Q + + P++K +R+IN +G + +F D Y GKE+A+VV NHK +ID+L GW L++R G LG + + KK ++P+IGW +F+E +F R W +D T+ + LQ LRDYP+ ++ Sbjct: 20 VFIASGLIINTVQLFTLL-LWPINKQLFRKINCRLSYCISSQLVMLLEWWSGTECTIFTDPRAYPKYGKENAIVVLNHKFEIDFLCGWSLSERFGLLGGSKVLAKKELAYVPIIGWMWYFTEMVFCSRKWEQDRKTVATSLQHLRDYPEKYF 170
BLAST of FC924870 vs. ExPASy Swiss-Prot
Match: PLCD_RAT (1-acyl-sn-glycerol-3-phosphate acyltransferase delta OS=Rattus norvegicus GN=Agpat4 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.667e-25 Identity = 56/151 (37.09%), Postives = 86/151 (56.95%), Query Frame = 3 Query: 168 LFFISGLVVNLIQAVCFVTIRPLSKNTYRRINRXXXXXXXXXXXXXXXXXAGVKIKLFVDRETYRLMGKEHALVVSNHKSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERNWAKDESTLKSGLQRLRDYPQPF 620 +F SGL+VN IQ +C + I P++K +R+IN +G + ++ D + GKE+A+VV NHK +ID+L GW LA+R G LG++ + KK ++P+IGW +F E +F R W +D T+ L LRDYP+ + Sbjct: 20 VFIASGLIVNAIQ-LCTLVIWPINKQLFRKINARLCYCVSSQLVMLLEWWSGTECTIYTDPKASPHYGKENAIVVLNHKFEIDFLCGWSLAERLGILGNSKVLAKKELAYVPIIGWMWYFVEMIFCTRKWEQDRQTVAKSLLHLRDYPEKY 169
BLAST of FC924870 vs. ExPASy Swiss-Prot
Match: PLCD_MOUSE (1-acyl-sn-glycerol-3-phosphate acyltransferase delta OS=Mus musculus GN=Agpat4 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.667e-25 Identity = 56/151 (37.09%), Postives = 86/151 (56.95%), Query Frame = 3 Query: 168 LFFISGLVVNLIQAVCFVTIRPLSKNTYRRINRXXXXXXXXXXXXXXXXXAGVKIKLFVDRETYRLMGKEHALVVSNHKSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERNWAKDESTLKSGLQRLRDYPQPF 620 +F SGL+VN IQ +C + I P++K +R+IN +G + ++ D + GKE+A+VV NHK +ID+L GW LA+R G LG++ + KK ++P+IGW +F E +F R W +D T+ L LRDYP+ + Sbjct: 20 VFIASGLIVNAIQ-LCTLVIWPINKQLFRKINARLCYCVSSQLVMLLEWWSGTECTIYTDPKACPHYGKENAIVVLNHKFEIDFLCGWSLAERLGILGNSKVLAKKELAYVPIIGWMWYFVEMIFCTRKWEQDRQTVAKSLLHLRDYPEKY 169
BLAST of FC924870 vs. ExPASy Swiss-Prot
Match: LPAT4_ARATH (Probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 4 OS=Arabidopsis thaliana GN=LPAT4 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.141e-11 Identity = 29/84 (34.52%), Postives = 47/84 (55.95%), Query Frame = 3 Query: 372 KEHALVVSNHKSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERNWAKDESTLKSGLQRLRDYPQPFW 623 ++ L+++NH++++DW+ W +A R GCLG V+K S LP+ GW E++ +ER DE L L +D +P W Sbjct: 96 EKRVLLIANHRTEVDWMYLWNIALRKGCLGYIKYVLKSSLMKLPIFGWGFHVLEFIPVERKREVDEPVLLQMLSSFKDPQEPLW 179
BLAST of FC924870 vs. ExPASy Swiss-Prot
Match: LPAT5_ARATH (Probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 5 OS=Arabidopsis thaliana GN=LPAT5 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.770e-11 Identity = 27/84 (32.14%), Postives = 49/84 (58.33%), Query Frame = 3 Query: 372 KEHALVVSNHKSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERNWAKDESTLKSGLQRLRDYPQPFW 623 ++ L+++NH++++DW+ W LA R G +G+ V+K S LP+ GW+ E++ +ER W DE+ L+ + +D W Sbjct: 91 EDRVLLIANHRTEVDWMYFWDLALRKGQIGNIKYVLKSSLMKLPLFGWAFHLFEFIPVERRWEVDEANLRQIVSSFKDPRDALW 174 The following BLAST results are available for this feature:
BLAST of FC924870 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924870 ID=FC924870; Name=FC924870; organism=Citrus clementina; type=EST; length=623bpback to top |