FC924877
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC924877 vs. ExPASy Swiss-Prot
Match: RS15_NATPD (30S ribosomal protein S15P/S13e OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rps15p PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.208e-21 Identity = 53/137 (38.69%), Postives = 79/137 (57.66%), Query Frame = 3 Query: 9 MGCMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSH----GIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTK 407 M MHSR +G S S P PP W ++ +ED + + A++G PSQIG+ LRD + VK TG K+ IL+ + E+PEDL +L+++A+ +R+H++RN D +K L ES+I RL YY+ K Sbjct: 1 MARMHSRRRGSSGSDRPTADEPPEWSEVDEDAIEDRVVELAEEGYDPSQIGLKLRDEGVQGVPVPDVKLATGKKVTEILEENDAENELPEDLRNLMERAIRLREHMDRNPGDAQNKRALQNTESKIRRLVDYYRGDK 137
BLAST of FC924877 vs. ExPASy Swiss-Prot
Match: RS15_THEVO (30S ribosomal protein S15P/S13e OS=Thermoplasma volcanium GN=rps15p PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.969e-20 Identity = 52/139 (37.41%), Postives = 80/139 (57.55%), Query Frame = 3 Query: 9 MGCMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVW 425 M MH+R +G S S Y P+W++ S ++ + K G+T S +G+ LRD +G+ VK++ G K+ ++L G+ EIPEDL LIK+ + KH+E N KD +K L+ +++ RL RYYK+T L W Sbjct: 1 MARMHTRKRGKSGSKKVYG-VEPNWVQYSKDEILNIAVDLKKSGMTSSVVGIRLRDQYGVPTVKAIFGKKLNKLLAEKGIRDEIPEDLNSLIKRYNNVAKHVELNPKDHSNKRGRDLIMAKMLRLVRYYKRTGVLDQKW 138
BLAST of FC924877 vs. ExPASy Swiss-Prot
Match: RS15_HALMA (30S ribosomal protein S15P/S13e OS=Haloarcula marismortui GN=rps15p PE=1 SV=3) HSP 1 Score: 89.7373 bits (221), Expect = 1.662e-17 Identity = 48/134 (35.82%), Postives = 75/134 (55.97%), Query Frame = 3 Query: 9 MGCMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSH----GIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYK 398 M MH+R +G S S P PP W + +E + + A++G +PS+IG+ LRD I V TG K+ IL+ + P++PEDL +L+++AV +R H++ N D +K L +S+I RL YY+ Sbjct: 1 MARMHTRRRGSSDSDKPAADEPPEWSDVDEDAIEARVVELAEQGHSPSEIGLKLRDEGVQGTPIPDVSLATGKKVTEILEENEAEPDLPEDLRNLLERAVRLRDHMDENPGDYQNKRALQNTQSKIRRLIDYYR 134 The following BLAST results are available for this feature:
BLAST of FC924877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924877 ID=FC924877; Name=FC924877; organism=Citrus clementina; type=EST; length=724bpback to top |