FC924883
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_BRUC2 (2-oxoglutarate dehydrogenase E1 component OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=sucA PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 8.418e-52 Identity = 108/207 (52.17%), Postives = 137/207 (66.18%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEERKKRSASDVAICRVEQLCPFPYDLVQRELKRYPNAEIVWCQEEPMNMGAYTYISPRL 621 GLV LLPHG++GQGPEHSSARLER+LQ+ ++ N Q+ NVTTPANYFH+LRRQ+ R FRKPLI+M+PK+LLRHK S L+E + G F + + KD+ + IRR+VLCSGKVYY+L EER+KR DV + RVEQL PFP + EL R+ +AE+VWCQEEP NMGA+++I P L Sbjct: 773 GLVCLLPHGFEGQGPEHSSARLERYLQLCAED------------------NMQVANVTTPANYFHILRRQMKRDFRKPLIMMTPKSLLRHKRAISTLAE---LSGESSFHRLLWDDAQYNKDEGIKLQKDAKIRRVVLCSGKVYYDLYEEREKRGIDDVYLLRVEQLYPFPAKALINELSRFRHAEMVWCQEEPKNMGAWSFIDPYL 958
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_SCHPO (2-oxoglutarate dehydrogenase, mitochondrial OS=Schizosaccharomyces pombe GN=kgd1 PE=2 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 5.456e-51 Identity = 101/217 (46.54%), Postives = 147/217 (67.74%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLI-KDQNGHSDL-EEGIRRLVLCSGKVYYELDEERKKRSASDVAICRVEQLCPFPYDLVQRELKRYPN-AEIVWCQEEPMNMGAYTYISPRLATAMKAL 642 G+V+ LPHGYDGQGPEHSSAR+ER+LQ+ +++P P + L++Q Q+CN Q + VT P+ YFH LRR IHR FRKPL++ K+LLRH +S + EFD+ G FK ++ ++++G S L E I +L++CSG+V+ L + R++ ++AI RVEQL PF + + + +YPN EI+WCQEEP+N GA+TY+ PR+ T +K L Sbjct: 766 GIVLSLPHGYDGQGPEHSSARMERYLQLCNEDPREFPS-EEKLQRQHQDCNIQAIYVTKPSQYFHALRRNIHRQFRKPLVIFFSKSLLRHPAARSTIDEFDEKHG----------FKLILEEEEHGKSILPPEKIEKLIICSGQVWVALSKAREENKIDNIAITRVEQLHPFGWKQMAANISQYPNLKEIIWCQEEPLNAGAWTYMEPRIYTILKHL 971
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_CAEBR (2-oxoglutarate dehydrogenase, mitochondrial OS=Caenorhabditis briggsae GN=CBG01737 PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 3.537e-50 Identity = 100/214 (46.73%), Postives = 141/214 (65.89%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTL------RKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEERKK-RSASDVAICRVEQLCPFPYDLVQRELKRYPNAEIVWCQEEPMNMGAYTYISPRL 621 GLV+LLPHGY+G GPEHSSAR ERFLQM +++ + ++D +Q+ + NW + N TTPAN +H+LRRQ+ FRKP +V SPK+LLRH +S + +F + G+ F+R+I + S ++RLV C+GKVYY++ RK +DVA+ RVEQL PFPYDLVQ+E ++Y AEI+W QEE NMGA++++ PR+ Sbjct: 772 GLVMLLPHGYEGMGPEHSSARPERFLQMCNEDDEI--DLDKIAFGGTFEAQQLHDTNWIVANCTTPANIYHLLRRQVTMPFRKPAVVFSPKSLLRHPMARSPVEDF----------QSGSNFQRIIPETGAPSQNPPNVQRLVFCTGKVYYDMVAARKHVGKENDVALVRVEQLSPFPYDLVQQECRKYQGAEIIWAQEEHKNMGAWSFVQPRI 973
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_CAEEL (2-oxoglutarate dehydrogenase, mitochondrial OS=Caenorhabditis elegans GN=T22B11.5 PE=1 SV=2) HSP 1 Score: 196.438 bits (498), Expect = 1.029e-49 Identity = 100/212 (47.17%), Postives = 141/212 (66.51%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPE---MDPTLR-KQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEERKK-RSASDVAICRVEQLCPFPYDLVQRELKRYPNAEIVWCQEEPMNMGAYTYISPRL 621 GLV+LLPHGY+G GPEHSSAR ERFLQM +++ + E + T +Q+ + NW + N TTPAN +H+LRRQ+ FRKP +V SPK+LLRH +S + +F + G+ F+R+I + S ++R+V C+GKVYY++ RK +DVA+ RVEQL PFPYDLVQ+E ++Y AEI+W QEE NMGA++++ PR+ Sbjct: 774 GLVMLLPHGYEGMGPEHSSARPERFLQMCNEDDEIDLEKIAFEGTFEAQQLHDTNWIVANCTTPANIYHLLRRQVTMPFRKPAVVFSPKSLLRHPMARSPVEDF----------QSGSNFQRVIPETGAPSQNPPDVKRVVFCTGKVYYDMVAARKHVGKENDVALVRVEQLSPFPYDLVQQECRKYQGAEILWAQEEHKNMGAWSFVQPRI 975
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_YEAST (2-oxoglutarate dehydrogenase, mitochondrial OS=Saccharomyces cerevisiae GN=KGD1 PE=1 SV=2) HSP 1 Score: 195.667 bits (496), Expect = 1.755e-49 Identity = 106/215 (49.30%), Postives = 142/215 (66.05%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKD-QNGHS-DLEEGIRRLVLCSGKVYYELDEERKKRSASDVAICRVEQLCPFPYDLVQRELKRYPN-AEIVWCQEEPMNMGAYTYISPRLATAMK 636 GLV+ LPHGYDGQGPEHSS RLERFLQ+++++P P + L++Q Q+CN+Q+V TTPAN FH+LRRQ HR FRKPL + K LLRH +S+LSEF + F+ +I+D ++G S +E +RLVL SG+VY L + R+ A ++EQL PFP+ ++ L YPN EIVWCQEEP+NMG++ Y PRL T +K Sbjct: 768 GLVLSLPHGYDGQGPEHSSGRLERFLQLANEDPRYFPS-EEKLQRQHQDCNFQVVYPTTPANLFHILRRQQHRQFRKPLALFFSKQLLRHPLARSSLSEFTE-----------GGFQWIIEDIEHGKSIGTKEETKRLVLLSGQVYTALHKRRESLGDKTTAFLKIEQLHPFPFAQLRDSLNSYPNLEEIVWCQEEPLNMGSWAYTEPRLHTTLK 970
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: DHTK1_DICDI (Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1 homolog, mitochondrial OS=Dictyostelium discoideum GN=odhA PE=3 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 5.107e-49 Identity = 100/207 (48.31%), Postives = 136/207 (65.70%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEERKKRSASDVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGAYTYISPR 618 G+V+LLPHG+DG GPEHSS R+ERFLQ+SD + D TL Q E N+ +N +TPANYFH LRRQ+ R +RKPLIV PK LLRH +C S L+E GT F+ ++ D + ++ I+R++ CSGKV+Y+L EERK ++ +DVAI R+EQ+ PFPY +Q E+ RY NA + W QEE N G ++++ PR Sbjct: 665 GIVILLPHGFDGAGPEHSSCRIERFLQLSDTE--AVNVKDDTLINQ--ETNFYFINPSTPANYFHALRRQMIRNYRKPLIVAGPKVLLRHPNCFSTLNEM----------APGTHFQTVLSDPDTINNAST-IKRVIFCSGKVFYDLQEERKAKNFNDVAIIRLEQIAPFPYQRIQEEINRYSNATKFAWVQEEQQNGGCWSFVEPR 856
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_RALEH (2-oxoglutarate dehydrogenase E1 component OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=odhA PE=3 SV=2) HSP 1 Score: 187.578 bits (475), Expect = 4.780e-47 Identity = 100/205 (48.78%), Postives = 135/205 (65.85%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEG-IRRLVLCSGKVYYELDEERKKRSASDVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGAYTYI 609 GL ++LPHGY+GQGPEHSSAR+ERFLQ+ D+ N Q+ TTPA FH+LRRQ+ R FRKPL++M+PK+LLR+KD S LS+ +GH F+ +I D H +L ++R+++CSGKVYY+L RK+R A+D A+ R+EQL PFP+ V ELK+YPNA EIVWCQ+EP N GA+ ++ Sbjct: 723 GLTLMLPHGYEGQGPEHSSARIERFLQLCADH------------------NMQVCQPTTPAQIFHLLRRQMIRLFRKPLVIMTPKSLLRNKDAVSPLSDL--AKGH---------FETVIPD---HEELNASKVKRVIMCSGKVYYDLVNTRKEREANDTAVIRLEQLYPFPHKAVAAELKKYPNATEIVWCQDEPQNQGAWFFV 895
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: DHTK1_DANRE (Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial OS=Danio rerio GN=dhtkd1 PE=2 SV=2) HSP 1 Score: 174.096 bits (440), Expect = 5.469e-43 Identity = 96/209 (45.93%), Postives = 126/209 (60.29%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEERK--KRSASDVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGAYTYISPR 618 GLV+LLPHGYDG GPEHSS R+ERFLQ+ D + N +VN T PA YFH+LRRQ+ R FRKPLIV SPK LLR S LS+ GT FK +I D + + ++R++ CSGK YY L + R+ + + A+ RVE+LCPFP + +Q+EL +Y NA E +W QEEP NMG ++++SPR Sbjct: 693 GLVILLPHGYDGAGPEHSSCRIERFLQLCDSKEEGVDG---------DTVNMAVVNPTLPAQYFHLLRRQMIRNFRKPLIVASPKTLLRFSGAVSGLSDMG----------PGTSFKPIIGDSSVN---PASVQRVLFCSGKHYYALLKHRETIPEAEKNTALVRVEELCPFPTEALQQELNKYTNAKEFIWSQEEPQNMGCWSFVSPR 879
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: DHTK1_XENLA (Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial OS=Xenopus laevis GN=dhtkd1 PE=2 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 7.143e-43 Identity = 94/209 (44.98%), Postives = 127/209 (60.77%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEERKK--RSASDVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGAYTYISPR 618 G+V+LLPHGYDG GPEHSS R+ERFLQM D + N +V+ TTPA YFH+LRRQ+ R FRKPLIV SPK LLR+ S+L + G F+ +I D + + + +++LCSGK YY L ++R+ AI RVE+LCPFP + +Q+E+ RYP A + +W QEEP NMGA+T+++PR Sbjct: 700 GIVILLPHGYDGAGPEHSSCRIERFLQMCDSTEEGVDG---------DTVNMFVVHPTTPAQYFHLLRRQMVRSFRKPLIVASPKMLLRYPAAVSSLEDI----------APGKTFRSVIGDSSAD---PKSVSKVILCSGKHYYALHKQREALGEQGRSSAIIRVEELCPFPLEALQQEIHRYPKAKDFIWSQEEPQNMGAWTFVAPR 886
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: DHTK1_MOUSE (Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial OS=Mus musculus GN=Dhtkd1 PE=2 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 4.630e-42 Identity = 95/209 (45.45%), Postives = 126/209 (60.29%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEERKKRSAS--DVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGAYTYISPR 618 GLV+LLPHGYDG GPEHSS R+ERFLQM D + N +V+ TTPA YFH+LRRQ+ R FRKPLIV SPK LLR+ S L E GT FK +I D S + ++ L+ CSGK +Y L ++R+ D AI R+E+LCPFP D +Q+E+ +Y + +++W QEEP NMG ++++SPR Sbjct: 693 GLVILLPHGYDGAGPEHSSCRIERFLQMCDSAEEGVDS---------DTVNMFVVHPTTPAQYFHLLRRQMIRNFRKPLIVASPKMLLRYPAAVSTLEEM----------APGTAFKPVIGDS---SVDPKNVKTLIFCSGKHFYALLKQRESLGTKKHDFAIIRLEELCPFPLDALQQEMSKYKHVRDVIWSQEEPQNMGPWSFVSPR 879 The following BLAST results are available for this feature:
BLAST of FC924883 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 108
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924883 ID=FC924883; Name=FC924883; organism=Citrus clementina; type=EST; length=644bpback to top |