FC924883
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: DHTK1_DROME (Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1 homolog, mitochondrial OS=Drosophila melanogaster GN=CG1544 PE=1 SV=2) HSP 1 Score: 171.014 bits (432), Expect = 4.630e-42 Identity = 96/206 (46.60%), Postives = 121/206 (58.74%), Query Frame = 1 Query: 4 LVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEERKKRSASDVAICRVEQLCPFPYDLVQRELKRYPNAE-IVWCQEEPMNMGAYTYISPR 618 LV+LLPHGYDG EHSS R+ERFLQ+ D N IVN TTPA Y+HVLRRQ+ R FRKPL+V++PK LLR S +F + GT F ++ D E +R+++LCSGK YY L EER+KR A D AI R+E LCPFP +Q +L +Y N + VW QEE NMGA+T++ PR Sbjct: 694 LVMLLPHGYDGAASEHSSCRIERFLQLCDSKE---------TSADGDSVNVHIVNPTTPAQYYHVLRRQLARNFRKPLVVVAPKTLLRLPAATSTHEDF----------QPGTLFHNVLGDTIAKP---EQVRKVILCSGKHYYTLAEEREKRQAYDTAILRLESLCPFPIQELQAQLAQYGNVQSFVWSQEEHRNMGAWTFVRPR 877
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_RICBR (2-oxoglutarate dehydrogenase E1 component OS=Rickettsia bellii (strain RML369-C) GN=sucA PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 6.047e-42 Identity = 104/214 (48.60%), Postives = 130/214 (60.75%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLE-EGIRRLVLCSGKVYYELDEERKKRSASDVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGAYTYISPRLATAMK 636 GLVVLLPHG++GQGPEHSSARLERFLQ++ ++ N + TTPA+ FH+LRRQI RKPLIVMSPK+LLRHK+ S L E T F ++ + N LE I +++LCSGKVYY+L E R S S +AI R+EQL PF +V LK+Y A E +WCQEEPMNMGA+ YI+ L A+K Sbjct: 705 GLVVLLPHGFEGQGPEHSSARLERFLQLAAED------------------NMYVTYPTTPASIFHLLRRQIIDNVRKPLIVMSPKSLLRHKNVVSKLDELG----------SNTTFLPVLDEVN---KLEASNITKVILCSGKVYYDLFEMR--GSNSSIAIIRLEQLYPFEKKVVVELLKKYNKASEFIWCQEEPMNMGAWRYITSHLNNALK 885
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: DHTK1_RAT (Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial OS=Rattus norvegicus GN=Dhtkd1 PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 3.001e-41 Identity = 95/209 (45.45%), Postives = 126/209 (60.29%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEERKKRSAS--DVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGAYTYISPR 618 GLV+LLPHGYDG GP+HSS R+ERFLQM D + N +V+ TTPA YFH+LRRQ+ R FRKPLIV SPK LLR+ S L E GT FK +I D S + ++ L+ CSGK +Y L ++R+ A D AI R+E+LCPFP D +Q+E+ +Y + +I+W QEEP NMG ++++ PR Sbjct: 692 GLVILLPHGYDGAGPDHSSCRIERFLQMCDSAEEGVDS---------DTVNMFVVHPTTPAQYFHLLRRQMMRNFRKPLIVASPKMLLRYPVAVSTLEEM----------APGTAFKPVIGDS---SVDPKNVKTLIFCSGKHFYALLKQRESLGAKKRDFAIIRLEELCPFPLDSLQQEMGKYKHVQDIIWSQEEPQNMGPWSFVYPR 878
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_GEOSW (2-oxoglutarate dehydrogenase E1 component OS=Geobacillus sp. (strain WCH70) GN=odhA PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 8.732e-41 Identity = 91/212 (42.92%), Postives = 127/212 (59.91%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQ---IHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEERKKRSASD-VAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGAYTYISPRL 621 GLV+LLPHGY+GQGPEHSS RLERFLQ++ +N NW + N++T A YFH+LRRQ + R +PL++M+PK+LLRH S++ EF + Q HP + +Q G + E + R++LC+GK +L E+ K D + I RVE+L PFP + +Q RYPN EI+W QEEP NMG++ Y+ P+L Sbjct: 725 GLVMLLPHGYEGQGPEHSSGRLERFLQLAAEN------------------NWTVANLSTAAQYFHILRRQAGILQREEVRPLVLMTPKSLLRHPLAASDVEEFTNGQFHP------------VIEQKGLGENREKVERIILCTGKFAIDLAEQINKMEGLDWLHIVRVEELYPFPKEELQAIFARYPNVKEIIWAQEEPKNMGSWCYVEPKL 906
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_ECOLI (2-oxoglutarate dehydrogenase E1 component OS=Escherichia coli (strain K12) GN=sucA PE=1 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.945e-40 Identity = 91/202 (45.05%), Postives = 126/202 (62.38%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLE-EGIRRLVLCSGKVYYELDEERKKRSASDVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGAY 600 GLV+LLPHGY+GQGPEHSSARLER+LQ+ E N Q+ +TPA +H+LRRQ RG R+PL+VMSPK+LLRH S+L E + P + +L+ +G++R+V+CSGKVYY+L E+R+K + DVAI R+EQL PFP+ +Q L+++ + + VWCQEEP+N GA+ Sbjct: 713 GLVMLLPHGYEGQGPEHSSARLERYLQLC------------------AEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHPLAVSSLEELANGTFLPAIGEI--------------DELDPKGVKRVVMCSGKVYYDLLEQRRKNNQHDVAIVRIEQLYPFPHKAMQEVLQQFAHVKDFVWCQEEPLNQGAW 882
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_ECOL6 (2-oxoglutarate dehydrogenase E1 component OS=Escherichia coli O6 GN=sucA PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.945e-40 Identity = 91/202 (45.05%), Postives = 126/202 (62.38%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLE-EGIRRLVLCSGKVYYELDEERKKRSASDVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGAY 600 GLV+LLPHGY+GQGPEHSSARLER+LQ+ E N Q+ +TPA +H+LRRQ RG R+PL+VMSPK+LLRH S+L E + P + +L+ +G++R+V+CSGKVYY+L E+R+K + DVAI R+EQL PFP+ +Q L+++ + + VWCQEEP+N GA+ Sbjct: 713 GLVMLLPHGYEGQGPEHSSARLERYLQLC------------------AEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHPLAVSSLEELANGTFLPAIGEI--------------DELDPKGVKRVVMCSGKVYYDLLEQRRKNNQHDVAIVRIEQLYPFPHKAMQEVLQQFAHVKDFVWCQEEPLNQGAW 882
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_ECO57 (2-oxoglutarate dehydrogenase E1 component OS=Escherichia coli O157:H7 GN=sucA PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.945e-40 Identity = 91/202 (45.05%), Postives = 126/202 (62.38%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLE-EGIRRLVLCSGKVYYELDEERKKRSASDVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGAY 600 GLV+LLPHGY+GQGPEHSSARLER+LQ+ E N Q+ +TPA +H+LRRQ RG R+PL+VMSPK+LLRH S+L E + P + +L+ +G++R+V+CSGKVYY+L E+R+K + DVAI R+EQL PFP+ +Q L+++ + + VWCQEEP+N GA+ Sbjct: 713 GLVMLLPHGYEGQGPEHSSARLERYLQLC------------------AEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHPLAVSSLEELANGTFLPAIGEI--------------DELDPKGVKRVVMCSGKVYYDLLEQRRKNNQHDVAIVRIEQLYPFPHKAMQEVLQQFAHVKDFVWCQEEPLNQGAW 882
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: DHTK1_CAEEL (Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1 homolog, mitochondrial OS=Caenorhabditis elegans GN=ZK836.2 PE=2 SV=4) HSP 1 Score: 165.236 bits (417), Expect = 2.541e-40 Identity = 90/213 (42.25%), Postives = 127/213 (59.62%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEERKKRSASD-VAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGAYTYISPRLATAM 633 GL +LLPHG+DG GPEHSS R+ERFLQ+ D P + N ++ N TT A YFH+LRRQ+ +RKPLIV+ PK LLRH S ++EF GT ++ +I ++ H+ + I++++ SGK + +++ R +R D VAI RVE LCPFP +Q LK+YP A + VW QEEP N GA++++ PR A+ Sbjct: 682 GLTMLLPHGFDGAGPEHSSCRMERFLQLCDSREDQTPVDG-------ENVNMRVANPTTSAQYFHLLRRQVVPNYRKPLIVVGPKILLRHPKAASTINEFG----------PGTTYQNVISEE--HATSSQKIKKVIFVSGKHWINVEKARDERGLKDSVAIVRVEMLCPFPVVDLQAVLKKYPGAQDFVWSQEEPRNAGAWSFVRPRFENAL 875
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_COXBU (2-oxoglutarate dehydrogenase E1 component OS=Coxiella burnetii GN=sucA PE=3 SV=3) HSP 1 Score: 164.851 bits (416), Expect = 3.318e-40 Identity = 92/215 (42.79%), Postives = 131/215 (60.93%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEERK--KRSASDVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGAYTYISPRLATAMK 636 G+V+ LPHGY+G+GPEHSSARLER+LQ+ N N Q+ TTP+ FH+LRRQ+ R +RKPL+V++PK++LR+K S+L D + K LI + H + I R++LCSGKVYY+L +R+ K + +A+ R+EQL PFPYD ++ EL++YPNA +++WCQEEP N GA+ RL M+ Sbjct: 713 GIVLFLPHGYEGKGPEHSSARLERYLQLCAQN------------------NMQVCAPTTPSQIFHLLRRQVLRPYRKPLVVLTPKSVLRNKLAVSSLE-----------DLARGQLKLLIPEIEKHD--PKKITRVILCSGKVYYDLLAKRREHKGKLNHIAMIRIEQLYPFPYDELKAELEKYPNAKQVIWCQEEPKNQGAWFCTRHRLIKCMR 896
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: DHTK1_HUMAN (Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial OS=Homo sapiens GN=DHTKD1 PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 3.318e-40 Identity = 95/209 (45.45%), Postives = 124/209 (59.33%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEERKKRSAS--DVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGAYTYISPR 618 G+V+LLPHGYDG GP+HSS R+ERFLQM D + N +V+ TTPA YFH+LRRQ+ R FRKPLIV SPK LLR S L E GT F +I D S + ++ LV CSGK +Y L ++R+ A D AI RVE+LCPFP D +Q+E+ +Y + + +W QEEP NMG ++++SPR Sbjct: 692 GIVILLPHGYDGAGPDHSSCRIERFLQMCDSAEEGVDG---------DTVNMFVVHPTTPAQYFHLLRRQMVRNFRKPLIVASPKMLLRLPAAVSTLQEM----------APGTTFNPVIGDS---SVDPKKVKTLVFCSGKHFYSLVKQRESLGAKKHDFAIIRVEELCPFPLDSLQQEMSKYKHVKDHIWSQEEPQNMGPWSFVSPR 878 The following BLAST results are available for this feature:
BLAST of FC924883 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 108
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924883 ID=FC924883; Name=FC924883; organism=Citrus clementina; type=EST; length=644bpback to top |