FC924883
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_STAES (2-oxoglutarate dehydrogenase E1 component OS=Staphylococcus epidermidis (strain ATCC 12228) GN=odhA PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 9.057e-30 Identity = 78/211 (36.97%), Postives = 116/211 (54.98%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQ---IHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEERKKRSASDVAICRVEQLCPFPYDLVQRELKRYPNAE-IVWCQEEPMNMGAYTYISPRL 621 GL + LPH ++GQGPEHSSARLERFLQ++ +N N +VN+++ +NYFH+LR Q + +PLIVMSPK+LLR+K + EF FK +I + E+ +++++L SGK+Y +L E K + + VE+L PFP + ++ LK P+ E + W QEEP N GA+ ++ P L Sbjct: 714 GLTLFLPHAFEGQGPEHSSARLERFLQLAAEN------------------NSTVVNLSSASNYFHLLRAQAASLDTLEMRPLIVMSPKSLLRNKTVAKPIDEF-----------TSGGFKPIITEDID----EQKVKKVILASGKMYIDLKEYLAKNPNDSILLIAVERLYPFPEEEIKEVLKSLPHLENVSWVQEEPKNQGAWLFVYPYL 891
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_STAEQ (2-oxoglutarate dehydrogenase E1 component OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=odhA PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 9.057e-30 Identity = 78/211 (36.97%), Postives = 116/211 (54.98%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQ---IHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEERKKRSASDVAICRVEQLCPFPYDLVQRELKRYPNAE-IVWCQEEPMNMGAYTYISPRL 621 GL + LPH ++GQGPEHSSARLERFLQ++ +N N +VN+++ +NYFH+LR Q + +PLIVMSPK+LLR+K + EF FK +I + E+ +++++L SGK+Y +L E K + + VE+L PFP + ++ LK P+ E + W QEEP N GA+ ++ P L Sbjct: 714 GLTLFLPHAFEGQGPEHSSARLERFLQLAAEN------------------NSTVVNLSSASNYFHLLRAQAASLDTLEMRPLIVMSPKSLLRNKTVAKPIDEF-----------TSGGFKPIITEDID----EQKVKKVILASGKMYIDLKEYLAKNPNDSILLIAVERLYPFPEEEIKEVLKSLPHLENVSWVQEEPKNQGAWLFVYPYL 891
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_STAHJ (2-oxoglutarate dehydrogenase E1 component OS=Staphylococcus haemolyticus (strain JCSC1435) GN=odhA PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.018e-29 Identity = 78/211 (36.97%), Postives = 114/211 (54.03%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQ---IHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEERKKRSASDVAICRVEQLCPFPYDLVQRELKRYPNAEIV-WCQEEPMNMGAYTYISPRL 621 GL + LPH ++GQGPEHSSARLERFLQ++ +N N +VN+++ +NYFH+LR Q + +PLIVMSPK+LLR+K + +F P +++D N +E + +LVL SGK++ +L E K + + V++L PFP ++ L PN E V W QEEP N GA+ ++ P L Sbjct: 714 GLTLFLPHAFEGQGPEHSSARLERFLQLAAEN------------------NSTVVNLSSSSNYFHLLRAQAKSLGTEAMRPLIVMSPKSLLRNKTVAKPIDQFTSGGFKP----------IIVEDGN-----KEKVTKLVLASGKMFIDLKEHLAKNPDDSILLVAVDRLYPFPEGEIKEVLNELPNLETVSWVQEEPKNQGAWLFVYPYL 891
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_STAAW (2-oxoglutarate dehydrogenase E1 component OS=Staphylococcus aureus (strain MW2) GN=odhA PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 5.870e-29 Identity = 76/209 (36.36%), Postives = 113/209 (54.07%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQ---IHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEERKKRSASDVAICRVEQLCPFPYDLVQRELKRYPN-AEIVWCQEEPMNMGAYTYISP 615 GL + LPH Y+GQGPEHSSARLERFLQ++ +N N +VN+++ +NYFH+LR Q + +PL+VMSPK+LLR+K + EF GF+ T S + + +++L +GK++ +L E K V + +E+L PFP + ++ L + PN E+ W QEEP N GA+ Y+ P Sbjct: 711 GLTLFLPHAYEGQGPEHSSARLERFLQLAAEN------------------NCTVVNLSSSSNYFHLLRAQAASLDSEQMRPLVVMSPKSLLRNKTVAKPIDEFTS----GGFEPILT-----------ESYQADKVTKVILATGKMFIDLKEALAKNPDESVLLVAIERLYPFPEEEIEALLAQLPNLEEVSWVQEEPKNQGAWLYVYP 886
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_STAAT (2-oxoglutarate dehydrogenase E1 component OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=odhA PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 5.870e-29 Identity = 76/209 (36.36%), Postives = 113/209 (54.07%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQ---IHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEERKKRSASDVAICRVEQLCPFPYDLVQRELKRYPN-AEIVWCQEEPMNMGAYTYISP 615 GL + LPH Y+GQGPEHSSARLERFLQ++ +N N +VN+++ +NYFH+LR Q + +PL+VMSPK+LLR+K + EF GF+ T S + + +++L +GK++ +L E K V + +E+L PFP + ++ L + PN E+ W QEEP N GA+ Y+ P Sbjct: 711 GLTLFLPHAYEGQGPEHSSARLERFLQLAAEN------------------NCTVVNLSSSSNYFHLLRAQAASLDSEQMRPLVVMSPKSLLRNKTVAKPIDEFTS----GGFEPILT-----------ESYQADKVTKVILATGKMFIDLKEALAKNPDESVLLVAIERLYPFPEEEIEALLAQLPNLEEVSWVQEEPKNQGAWLYVYP 886
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_STAAS (2-oxoglutarate dehydrogenase E1 component OS=Staphylococcus aureus (strain MSSA476) GN=odhA PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 5.870e-29 Identity = 76/209 (36.36%), Postives = 113/209 (54.07%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQ---IHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEERKKRSASDVAICRVEQLCPFPYDLVQRELKRYPN-AEIVWCQEEPMNMGAYTYISP 615 GL + LPH Y+GQGPEHSSARLERFLQ++ +N N +VN+++ +NYFH+LR Q + +PL+VMSPK+LLR+K + EF GF+ T S + + +++L +GK++ +L E K V + +E+L PFP + ++ L + PN E+ W QEEP N GA+ Y+ P Sbjct: 711 GLTLFLPHAYEGQGPEHSSARLERFLQLAAEN------------------NCTVVNLSSSSNYFHLLRAQAASLDSEQMRPLVVMSPKSLLRNKTVAKPIDEFTS----GGFEPILT-----------ESYQADKVTKVILATGKMFIDLKEALAKNPDESVLLVAIERLYPFPEEEIEALLAQLPNLEEVSWVQEEPKNQGAWLYVYP 886
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_STAAR (2-oxoglutarate dehydrogenase E1 component OS=Staphylococcus aureus (strain MRSA252) GN=odhA PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 5.870e-29 Identity = 76/209 (36.36%), Postives = 113/209 (54.07%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQ---IHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEERKKRSASDVAICRVEQLCPFPYDLVQRELKRYPN-AEIVWCQEEPMNMGAYTYISP 615 GL + LPH Y+GQGPEHSSARLERFLQ++ +N N +VN+++ +NYFH+LR Q + +PL+VMSPK+LLR+K + EF GF+ T S + + +++L +GK++ +L E K V + +E+L PFP + ++ L + PN E+ W QEEP N GA+ Y+ P Sbjct: 711 GLTLFLPHAYEGQGPEHSSARLERFLQLAAEN------------------NCTVVNLSSSSNYFHLLRAQAASLDSEQMRPLVVMSPKSLLRNKTVAKPIDEFTS----GGFEPILT-----------ESYQADKVTKVILATGKMFIDLKEALAKNPDESVLLVAIERLYPFPEEEIEALLAQLPNLEEVSWVQEEPKNQGAWLYVYP 886
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_STAAM (2-oxoglutarate dehydrogenase E1 component OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=odhA PE=1 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 5.870e-29 Identity = 76/209 (36.36%), Postives = 113/209 (54.07%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQ---IHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEERKKRSASDVAICRVEQLCPFPYDLVQRELKRYPN-AEIVWCQEEPMNMGAYTYISP 615 GL + LPH Y+GQGPEHSSARLERFLQ++ +N N +VN+++ +NYFH+LR Q + +PL+VMSPK+LLR+K + EF GF+ T S + + +++L +GK++ +L E K V + +E+L PFP + ++ L + PN E+ W QEEP N GA+ Y+ P Sbjct: 711 GLTLFLPHAYEGQGPEHSSARLERFLQLAAEN------------------NCTVVNLSSSSNYFHLLRAQAASLDSEQMRPLVVMSPKSLLRNKTVAKPIDEFTS----GGFEPILT-----------ESYQADKVTKVILATGKMFIDLKEALAKNPDESVLLVAIERLYPFPEEEIEALLAQLPNLEEVSWVQEEPKNQGAWLYVYP 886
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_STAAE (2-oxoglutarate dehydrogenase E1 component OS=Staphylococcus aureus (strain Newman) GN=odhA PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 5.870e-29 Identity = 76/209 (36.36%), Postives = 113/209 (54.07%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQ---IHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEERKKRSASDVAICRVEQLCPFPYDLVQRELKRYPN-AEIVWCQEEPMNMGAYTYISP 615 GL + LPH Y+GQGPEHSSARLERFLQ++ +N N +VN+++ +NYFH+LR Q + +PL+VMSPK+LLR+K + EF GF+ T S + + +++L +GK++ +L E K V + +E+L PFP + ++ L + PN E+ W QEEP N GA+ Y+ P Sbjct: 711 GLTLFLPHAYEGQGPEHSSARLERFLQLAAEN------------------NCTVVNLSSSSNYFHLLRAQAASLDSEQMRPLVVMSPKSLLRNKTVAKPIDEFTS----GGFEPILT-----------ESYQADKVTKVILATGKMFIDLKEALAKNPDESVLLVAIERLYPFPEEEIEALLAQLPNLEEVSWVQEEPKNQGAWLYVYP 886
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_STAAC (2-oxoglutarate dehydrogenase E1 component OS=Staphylococcus aureus (strain COL) GN=odhA PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 5.870e-29 Identity = 76/209 (36.36%), Postives = 113/209 (54.07%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQ---IHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEERKKRSASDVAICRVEQLCPFPYDLVQRELKRYPN-AEIVWCQEEPMNMGAYTYISP 615 GL + LPH Y+GQGPEHSSARLERFLQ++ +N N +VN+++ +NYFH+LR Q + +PL+VMSPK+LLR+K + EF GF+ T S + + +++L +GK++ +L E K V + +E+L PFP + ++ L + PN E+ W QEEP N GA+ Y+ P Sbjct: 711 GLTLFLPHAYEGQGPEHSSARLERFLQLAAEN------------------NCTVVNLSSSSNYFHLLRAQAASLDSEQMRPLVVMSPKSLLRNKTVAKPIDEFTS----GGFEPILT-----------ESYQADKVTKVILATGKMFIDLKEALAKNPDESVLLVAIERLYPFPEEEIEALLAQLPNLEEVSWVQEEPKNQGAWLYVYP 886 The following BLAST results are available for this feature:
BLAST of FC924883 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 108
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924883 ID=FC924883; Name=FC924883; organism=Citrus clementina; type=EST; length=644bpback to top |