FC924902
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC924902 vs. ExPASy Swiss-Prot
Match: CH60A_ARATH (Chaperonin CPN60, mitochondrial OS=Arabidopsis thaliana GN=CPN60 PE=1 SV=2) HSP 1 Score: 192.2 bits (487), Expect = 1.599e-48 Identity = 103/196 (52.55%), Postives = 139/196 (70.92%), Query Frame = 3 Query: 162 MLGSCKKVKVTNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESXXXXXXXXXXXXXXXXXMEEGIIPGGGVALLHASEELEKLPAMNIGEKIGVKLLQHAVKMPLYTIASTAGFQVSV-VEKLLGQENPDLEYDPPRDEYVDAVKSAIVDPPLKLIKNELDDAVS 746 MLG+CKKV V+ ++ +I G+G++ IE+RCEQ+ AIE+STSDY+ + L+ERL LS VA+LK+GGA+ AE +EEGI+PGGGVALL+A+ ELEKLP N +KIGV+++Q+A+K P+YTIAS AG + +V V KLL Q+NPDL YD + EYVD VK+ I+D PLK+I+ L DA S Sbjct: 346 MLGTCKKVTVSKDDTVILDGAGDKKGIEERCEQIRSAIELSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGILPGGGVALLYAARELEKLPTANFDQKIGVQIIQNALKTPVYTIASNAGVEGAVIVGKLLEQDNPDLGYDAAKGEYVDMVKAGIID-PLKVIRTALVDAAS 540 HSP 2 Score: 21.557 bits (44), Expect = 1.599e-48 Identity = 9/17 (52.94%), Postives = 13/17 (76.47%), Query Frame = 2 Query: 74 YEENCKAIMRDIAILTG 124 + EN KA ++D+A LTG Sbjct: 311 FGENRKANLQDLAALTG 327
BLAST of FC924902 vs. ExPASy Swiss-Prot
Match: CH62_CUCMA (Chaperonin CPN60-2, mitochondrial OS=Cucurbita maxima GN=CPN60-2 PE=1 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 1.332e-47 Identity = 99/196 (50.51%), Postives = 138/196 (70.41%), Query Frame = 3 Query: 162 MLGSCKKVKVTNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESXXXXXXXXXXXXXXXXXMEEGIIPGGGVALLHASEELEKLPAMNIGEKIGVKLLQHAVKMPLYTIASTAGFQ-VSVVEKLLGQENPDLEYDPPRDEYVDAVKSAIVDPPLKLIKNELDDAVS 746 MLGSCKK+ ++ ++ +I G+G++ IE+RCEQ+ AIE+STSDY+ + L+ERL LS VA+LK+GGA+ AE +EEGI+PGGGVALL+AS+EL+KL N +KIGV+++Q+A+K P++TIAS AG + VV KLL Q+NPDL YD + EYVD +K+ I+D PLK+I+ L DA S Sbjct: 347 MLGSCKKITISKDDTVILDGAGDKKSIEERCEQIRSAIELSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLSTANFDQKIGVQIIQNALKTPVHTIASNAGVEGAVVVGKLLEQDNPDLGYDAAKGEYVDMIKAGIID-PLKVIRTALVDAAS 541 HSP 2 Score: 22.3274 bits (46), Expect = 1.332e-47 Identity = 9/17 (52.94%), Postives = 13/17 (76.47%), Query Frame = 2 Query: 74 YEENCKAIMRDIAILTG 124 + EN KA + D+A+LTG Sbjct: 312 FGENRKAGLHDLAVLTG 328
BLAST of FC924902 vs. ExPASy Swiss-Prot
Match: CH61_CUCMA (Chaperonin CPN60-1, mitochondrial OS=Cucurbita maxima GN=CPN60-1 PE=1 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 8.194e-47 Identity = 106/227 (46.70%), Postives = 148/227 (65.20%), Query Frame = 3 Query: 78 KKIAKQSCGTLPFSQVVTA--ASNSLYIPL-MLGSCKKVKVTNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESXXXXXXXXXXXXXXXXXMEEGIIPGGGVALLHASEELEKLPAMNIGEKIGVKLLQHAVKMPLYTIASTAGFQ-VSVVEKLLGQENPDLEYDPPRDEYVDAVKSAIVDPPLKLIKNELDDAVS 746 +K Q L QV+T N + L MLGSCKK+ ++ ++ +I G+G++ IE+RC+Q+ IE STSDY+ + L+ERL LS VA+LK+GGA+ AE +EEGI+PGGGVALL+AS+EL+KLP N +KIGV+++Q+A+K P++TIAS AG + VV KLL Q++PDL YD + EYVD VK+ I+D PLK+I+ L DA S Sbjct: 316 RKAGLQDLAVLTGGQVITEELGMNLEKVDLDMLGSCKKITISKDDTVILDGAGDKKAIEERCDQIRSGIEASTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLPTANFDQKIGVQIIQNALKTPVHTIASNAGVEGAVVVGKLLEQDDPDLGYDAAKGEYVDMVKAGIID-PLKVIRTALVDAAS 541
BLAST of FC924902 vs. ExPASy Swiss-Prot
Match: CH61_MAIZE (Chaperonin CPN60-1, mitochondrial OS=Zea mays GN=CPN60I PE=1 SV=2) HSP 1 Score: 182.956 bits (463), Expect = 2.454e-46 Identity = 101/198 (51.01%), Postives = 136/198 (68.69%), Query Frame = 3 Query: 156 PLMLGSCKKVKVTNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESXXXXXXXXXXXXXXXXXMEEGIIPGGGVALLHASEELEKLPAMNIGEKIGVKLLQHAVKMPLYTIASTAGFQ-VSVVEKLLGQENPDLEYDPPRDEYVDAVKSAIVDPPLKLIKNELDDAVS 746 P MLG+CKKV V+ ++ +I G+G++ IE+R EQ+ AIE STSDY+ + L+ERL LS VA+LK+GGA+ AE +EEGI+PGGGVALL+AS+EL+KL N +KIGV+++Q+A+K P++TIAS AG + VV KLL QEN DL YD + EYVD VK+ I+D PLK+I+ L DA S Sbjct: 347 PHMLGTCKKVTVSKDDTVILDGAGDKKSIEERAEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLQTANFDQKIGVQIIQNALKTPVHTIASNAGVEGAVVVGKLLEQENTDLGYDAAKGEYVDMVKTGIID-PLKVIRTALVDAAS 543 HSP 2 Score: 23.483 bits (49), Expect = 2.454e-46 Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 2 Query: 74 YEENCKAIMRDIAILTG 124 + EN KA ++D+AILTG Sbjct: 314 FGENRKANLQDLAILTG 330
BLAST of FC924902 vs. ExPASy Swiss-Prot
Match: CH62_MAIZE (Chaperonin CPN60-2, mitochondrial OS=Zea mays GN=CPN60II PE=2 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 3.198e-46 Identity = 100/198 (50.51%), Postives = 136/198 (68.69%), Query Frame = 3 Query: 156 PLMLGSCKKVKVTNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESXXXXXXXXXXXXXXXXXMEEGIIPGGGVALLHASEELEKLPAMNIGEKIGVKLLQHAVKMPLYTIASTAGFQ-VSVVEKLLGQENPDLEYDPPRDEYVDAVKSAIVDPPLKLIKNELDDAVS 746 P MLGSCKKV V+ ++ +I G+G++ IE+R +Q+ A+E STSDY+ + L+ERL LS VA+LK+GGA+ AE +EEGI+PGGGVALL+AS+EL+KL N +KIGV+++Q+A+K P++TIAS AG + VV KLL Q N DL YD +DEYVD VK+ I+D PLK+I+ L DA S Sbjct: 347 PHMLGSCKKVTVSKDDTVILDGAGDKKSIEERADQIRSAVENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLQTANFDQKIGVQIIQNALKTPVHTIASNAGVEGAVVVGKLLEQGNTDLGYDAAKDEYVDMVKAGIID-PLKVIRTALVDAAS 543 HSP 2 Score: 23.483 bits (49), Expect = 3.198e-46 Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 2 Query: 74 YEENCKAIMRDIAILTG 124 + EN KA ++D+AILTG Sbjct: 314 FGENRKANLQDLAILTG 330
BLAST of FC924902 vs. ExPASy Swiss-Prot
Match: CH60B_ARATH (Chaperonin CPN60-like 1, mitochondrial OS=Arabidopsis thaliana GN=At2g33210 PE=1 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 3.467e-45 Identity = 96/196 (48.98%), Postives = 133/196 (67.86%), Query Frame = 3 Query: 162 MLGSCKKVKVTNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESXXXXXXXXXXXXXXXXXMEEGIIPGGGVALLHASEELEKLPAMNIGEKIGVKLLQHAVKMPLYTIASTAGFQ-VSVVEKLLGQENPDLEYDPPRDEYVDAVKSAIVDPPLKLIKNELDDAVS 746 M G+CKKV V+ ++ ++ G+G++ I +RCEQ+ +E STSDY+ + L+ERL LS VA+LK+GGA+ E +EEGI+PGGGVALL+AS+ELEKL N +KIGV+++Q+A+K P+YTIAS AG + VV KLL Q+NPDL YD + EYVD +K+ I+D PLK+I+ L DA S Sbjct: 347 MFGNCKKVTVSKDDTVVLDGAGDKQAIGERCEQIRSMVEASTSDYDKEKLQERLAKLSGGVAVLKIGGASETEVSEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELEKLSTANFDQKIGVQIIQNALKTPVYTIASNAGVEGAVVVGKLLEQDNPDLGYDAAKGEYVDMIKAGIID-PLKVIRTALVDAAS 541 HSP 2 Score: 21.1718 bits (43), Expect = 3.467e-45 Identity = 9/17 (52.94%), Postives = 12/17 (70.59%), Query Frame = 2 Query: 74 YEENCKAIMRDIAILTG 124 + EN KA + D+A LTG Sbjct: 312 FGENRKANLHDLAALTG 328
BLAST of FC924902 vs. ExPASy Swiss-Prot
Match: CH60_BRANA (Chaperonin CPN60, mitochondrial OS=Brassica napus PE=2 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.467e-43 Identity = 104/228 (45.61%), Postives = 145/228 (63.60%), Query Frame = 3 Query: 78 KKIAKQSCGTLPFSQVVTA--ASNSLYIPL-MLGSCKKVKVTNNEMIIHG-GSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESXXXXXXXXXXXXXXXXXMEEGIIPGGGVALLHASEELEKLPAMNIGEKIGVKLLQHAVKMPLYTIASTAGFQVSV-VEKLLGQENPDLEYDPPRDEYVDAVKSAIVDPPLKLIKNELDDAVS 746 +K TL +QV+T N I L MLG+CKK+ V+ ++ + G G+G++ I +RCEQ+ +E S SDY+ + L+ERL LS VA+LK+GGA+ +E +EEGI+PGGGVALL+AS+EL+KL N KIGV+++Q+A+K P+YTIAS AG + +V V KLL +NPDL YD + EYVD VKS I+D P+K+I+ L DA S Sbjct: 318 RKANMHDLATLTGAQVITEELGMNLEKIDLSMLGNCKKITVSKDDTVFLGWGAGDKKAIGERCEQIRSMVEASESDYDKEKLQERLAKLSGGVAVLKIGGASESEVGEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLSTANFDHKIGVQIIQNALKTPVYTIASNAGVEGAVIVGKLLESDNPDLGYDAAKGEYVDMVKSGIID-PVKVIRTALVDAAS 544
BLAST of FC924902 vs. ExPASy Swiss-Prot
Match: CH60C_ARATH (Chaperonin CPN60-like 2, mitochondrial OS=Arabidopsis thaliana GN=At3g13860 PE=1 SV=2) HSP 1 Score: 151.369 bits (381), Expect = 3.190e-36 Identity = 86/198 (43.43%), Postives = 127/198 (64.14%), Query Frame = 3 Query: 156 PLMLGSCKKVKVTNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESXXXXXXXXXXXXXXXXXMEEGIIPGGGVALLHASEELEKLPAMNIGEKIGVKLLQHAVKMPLYTIASTAGFQVS-VVEKLLGQENPDLEYDPPRDEYVDAVKSAIVDPPLKLIKNELDDAVS 746 P +LG+ KKV VT ++ II G G++ IE+RCE+L A E STS ++ + +ERL LS VA+ KVGGA+ +E +EEGIIPGGGVALL+A++ L+ L N ++ GV+++Q+A+K P +TIA+ AG+ S VV KLL Q++ + +D + +YVD VK+ I+D P+K+I+ L DA S Sbjct: 344 PELLGTAKKVTVTRDDTIILHGGGDKKLIEERCEELRSANEKSTSTFDQEKTQERLSKLSGGVAVFKVGGASESEVGERKDRVTDALNATRAAVEEGIIPGGGVALLYATKALDNLQTENEDQRRGVQIVQNALKAPAFTIAANAGYDGSLVVGKLLEQDDCNFGFDAAKGKYVDMVKAGIID-PVKVIRTALTDAAS 540 HSP 2 Score: 21.1718 bits (43), Expect = 3.190e-36 Identity = 8/17 (47.06%), Postives = 13/17 (76.47%), Query Frame = 2 Query: 74 YEENCKAIMRDIAILTG 124 + +N KA + D+A+LTG Sbjct: 311 FGDNRKASLDDLAVLTG 327
BLAST of FC924902 vs. ExPASy Swiss-Prot
Match: CH60_SULSY (60 kDa chaperonin OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=groL PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.741e-30 Identity = 77/196 (39.29%), Postives = 112/196 (57.14%), Query Frame = 3 Query: 162 MLGSCKKVKVTNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESXXXXXXXXXXXXXXXXXMEEGIIPGGGVALLHASEELEKLPAMNIGEKIGVKLLQHAVKMPLYTIASTAGFQVSV-VEKLLGQENPDLEYDPPRDEYVDAVKSAIVDPPLKLIKNELDDAVS 746 MLG KV V + I GG GN I+ R EQ+ IE +TS+Y+ + L+ERL L+ VAI+KVG AT AE +EEGI+PGGG+A+ AS L + N + G+K++++A K+PL IA AGF+ SV +EK+ +N + +D EYVD V++ I+D P K+++ L +A S Sbjct: 316 MLGKADKVVVDKDNTTIIGGKGNPEDIKARIEQIKKQIETTTSEYDKEKLQERLAKLAGGVAIIKVGAATEAELKEKKDRVDDAVHATKAAVEEGIVPGGGIAIFRASRALCNIKEENTDKAWGIKIVKNACKVPLKQIAYNAGFEGSVIIEKIKDVDNVNYGFDAATGEYVDMVEAGIID-PTKVVRTALQNAAS 510 HSP 2 Score: 23.483 bits (49), Expect = 1.741e-30 Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 2 Query: 74 YEENCKAIMRDIAILTG 124 + E KA+++DIAILTG Sbjct: 281 FGERRKAMLQDIAILTG 297
BLAST of FC924902 vs. ExPASy Swiss-Prot
Match: CH60_PELUB (60 kDa chaperonin OS=Pelagibacter ubique GN=groL PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.128e-30 Identity = 78/195 (40.00%), Postives = 108/195 (55.38%), Query Frame = 3 Query: 165 LGSCKKVKVTNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESXXXXXXXXXXXXXXXXXMEEGIIPGGGVALLHASEELEKLPAMNIGEKIGVKLLQHAVKMPLYTIASTAGFQVS-VVEKLLGQENPDLEYDPPRDEYVDAVKSAIVDPPLKLIKNELDDAVS 746 LGSCK+VKV + I G+G + IE RC Q+ + +TSDY+ + L+ERL L+ VA++KVGGAT E EEGI+ GGG ALL+AS+ L+ L +K GV L+ A++ P+ I AG S VV KLL Q ++ YD +EYVD I+D P+K+++ L DA S Sbjct: 316 LGSCKRVKVDKDNSTIISGNGKKSEIEARCAQIKQQVGETTSDYDREKLQERLAKLAGGVAVIKVGGATEVEVKERKDRVEDALNATRAAAEEGIVVGGGCALLYASQSLDTLKVKGDDQKAGVALVAKALQAPIRQITLNAGVDGSVVVGKLLEQNKKNMGYDAQNEEYVDMFAKGIID-PVKVVRTALQDAAS 509 The following BLAST results are available for this feature:
BLAST of FC924902 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924902 ID=FC924902; Name=FC924902; organism=Citrus clementina; type=EST; length=750bpback to top |