FC924902
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC924902 vs. ExPASy Swiss-Prot
Match: CH60_DICT6 (60 kDa chaperonin OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=groL PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.782e-26 Identity = 66/195 (33.85%), Postives = 112/195 (57.44%), Query Frame = 3 Query: 162 MLGSCKKVKVTNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESXXXXXXXXXXXXXXXXXMEEGIIPGGGVALLHASEELEKLPAMNIGEKIGVKLLQHAVKMPLYTIASTAGFQVSVVEKLLGQENPDLEYDPPRDEYVDAVKSAIVDPPLKLIKNELDDAVS 746 MLG +KV+ ++ I GG GN+ IE R Q+ +E + S+++ + L+ERL L+ VA++KVG AT E +EEGI+PGGGVALL + L+ + N E+IGV++++ ++ +PL IA+ AG + S++ + + + + + YD D +V+ ++ IVD P K+ ++ L +A S Sbjct: 316 MLGRAEKVRANKDKTTIIGGKGNKKDIEARIAQIKKQLEETDSEFDREKLQERLAKLAGGVAVIKVGAATEVELKEKKHRIEDALSATKAAVEEGIVPGGGVALLRTIKALDDVKVDNEDERIGVEIVRRSLDVPLKLIANNAGKEGSIIAEKVKEMDGPMGYDAANDRFVNMFEAGIVD-PAKVTRSALQNAAS 509 HSP 2 Score: 22.3274 bits (46), Expect = 1.782e-26 Identity = 9/12 (75.00%), Postives = 12/12 (100.00%), Query Frame = 2 Query: 89 KAIMRDIAILTG 124 KA+++DIAILTG Sbjct: 286 KAMLQDIAILTG 297
BLAST of FC924902 vs. ExPASy Swiss-Prot
Match: CH60_RAT (60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus GN=Hspd1 PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.098e-26 Identity = 65/192 (33.85%), Postives = 113/192 (58.85%), Query Frame = 3 Query: 165 LGSCKKVKVTNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESXXXXXXXXXXXXXXXXXMEEGIIPGGGVALLHASEELEKLPAMNIGEKIGVKLLQHAVKMPLYTIASTAGFQVSVVEKLLGQENPDLEYDPPRDEYVDAVKSAIVDPPLKLIKNELDDA 740 LG +V VT ++ ++ G G++ +IE R +++++ ++++TS+YE + L ERL LS VA+LKVGG + E +EEGI+ GGG ALL L+ L N +KIG+++++ A+K+P TIA AG + S++ + + Q + ++ YD ++V+ V+ I+D P K+++ L DA Sbjct: 342 LGKVGEVIVTKDDAMLLKGKGDKAHIEKRIQEITEQLDITTSEYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDRVTDALNATRAAVEEGIVLGGGCALLRCIPALDSLKPANEDQKIGIEIIKRALKIPAMTIAKNAGVEGSLIVEKILQSSSEVGYDAMLGDFVNMVEKGIID-PTKVVRTALLDA 532
BLAST of FC924902 vs. ExPASy Swiss-Prot
Match: CH60_ORITI (60 kDa chaperonin OS=Orientia tsutsugamushi (strain Ikeda) GN=groL PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.098e-26 Identity = 72/198 (36.36%), Postives = 112/198 (56.57%), Query Frame = 3 Query: 165 LGSCKKVKVTNNEM-IIHGGSGNQVY--IEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESXXXXXXXXXXXXXXXXXMEEGIIPGGGVALLHASEELEKLPAMNIGEKIGVKLLQHAVKMPLYTIASTAGFQVSVVEKLLGQEN-PDLEYDPPRDEYVDAVKSAIVDPPLKLIKNELDDAVS 746 LG+ +V VT + I+H + + + + RCEQ+ +AI+ +TSDYE + L+ERL L + VA+LKVGGAT E +EEGI+PGGGVAL +AS L+ L N +++G+ +++ ++ P+ I AG + VV L + N + +D +YVD +K+ IVD P K+++ L DA S Sbjct: 317 LGTANRVIVTKDHTTIVHDKNNSDIEKKVNSRCEQIREAIKDTTSDYEKEKLQERLAKLRNGVAVLKVGGATEVEQKERKDRVEDALHATRAAVEEGIVPGGGVALFYASRVLDSLKFDNEDQRVGINIIKKVLEAPVRQIVKNAGGKEDVVVNELSKSNDKNRGFDARTMQYVDMIKAGIVD-PTKVVRTALQDAFS 513
BLAST of FC924902 vs. ExPASy Swiss-Prot
Match: CH60_ORITB (60 kDa chaperonin OS=Orientia tsutsugamushi (strain Boryong) GN=groL PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.098e-26 Identity = 72/198 (36.36%), Postives = 112/198 (56.57%), Query Frame = 3 Query: 165 LGSCKKVKVTNNEM-IIHGGSGNQVY--IEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESXXXXXXXXXXXXXXXXXMEEGIIPGGGVALLHASEELEKLPAMNIGEKIGVKLLQHAVKMPLYTIASTAGFQVSVVEKLLGQEN-PDLEYDPPRDEYVDAVKSAIVDPPLKLIKNELDDAVS 746 LG+ +V VT + I+H + + + + RCEQ+ +AI+ +TSDYE + L+ERL L + VA+LKVGGAT E +EEGI+PGGGVAL +AS L+ L N +++G+ +++ ++ P+ I AG + VV L + N + +D +YVD +K+ IVD P K+++ L DA S Sbjct: 317 LGTANRVIVTKDHTTIVHDKNNSDIEKKVNSRCEQIREAIKDTTSDYEKEKLQERLAKLRNGVAVLKVGGATEVEQKERKDRVEDALHATRAAVEEGIVPGGGVALFYASRVLDSLKFDNEDQRVGINIIKKVLEAPVRQIVKNAGGKEDVVVNELSKSNDKNRGFDARTMQYVDMIKAGIVD-PTKVVRTALQDAFS 513
BLAST of FC924902 vs. ExPASy Swiss-Prot
Match: CH60_MOUSE (60 kDa heat shock protein, mitochondrial OS=Mus musculus GN=Hspd1 PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.098e-26 Identity = 65/192 (33.85%), Postives = 113/192 (58.85%), Query Frame = 3 Query: 165 LGSCKKVKVTNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESXXXXXXXXXXXXXXXXXMEEGIIPGGGVALLHASEELEKLPAMNIGEKIGVKLLQHAVKMPLYTIASTAGFQVSVVEKLLGQENPDLEYDPPRDEYVDAVKSAIVDPPLKLIKNELDDA 740 LG +V VT ++ ++ G G++ +IE R +++++ ++++TS+YE + L ERL LS VA+LKVGG + E +EEGI+ GGG ALL L+ L N +KIG+++++ A+K+P TIA AG + S++ + + Q + ++ YD ++V+ V+ I+D P K+++ L DA Sbjct: 342 LGKVGEVIVTKDDAMLLKGKGDKAHIEKRIQEITEQLDITTSEYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDRVTDALNATRAAVEEGIVLGGGCALLRCIPALDSLKPANEDQKIGIEIIKRALKIPAMTIAKNAGVEGSLIVEKILQSSSEVGYDAMLGDFVNMVEKGIID-PTKVVRTALLDA 532
BLAST of FC924902 vs. ExPASy Swiss-Prot
Match: CH60_CRIGR (60 kDa heat shock protein, mitochondrial OS=Cricetulus griseus GN=HSPD1 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.098e-26 Identity = 66/192 (34.38%), Postives = 111/192 (57.81%), Query Frame = 3 Query: 165 LGSCKKVKVTNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESXXXXXXXXXXXXXXXXXMEEGIIPGGGVALLHASEELEKLPAMNIGEKIGVKLLQHAVKMPLYTIASTAGFQVSVVEKLLGQENPDLEYDPPRDEYVDAVKSAIVDPPLKLIKNELDDA 740 LG +V VT ++ ++ G G + IE R +++++ +E++TS+YE + L ERL LS VA+LKVGG + E +EEGI+ GGG ALL L+ L N +KIG+++++ A+K+P TIA AG + S++ + + Q + ++ YD ++V+ V+ I+D P K+++ L DA Sbjct: 342 LGKVGEVIVTKDDAMLLKGKGEKAQIEKRIQEITEQLEITTSEYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDRVTDALNATRAAVEEGIVLGGGCALLRCIPALDSLKPSNEDQKIGIEIIKRALKIPAMTIAKNAGVEGSLIVEKILQSSSEIGYDAMLGDFVNMVEKGIID-PTKVVRTALLDA 532
BLAST of FC924902 vs. ExPASy Swiss-Prot
Match: CH601_BRASB (60 kDa chaperonin 1 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=groL1 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 2.319e-26 Identity = 70/196 (35.71%), Postives = 108/196 (55.10%), Query Frame = 3 Query: 162 MLGSCKKVKVTNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESXXXXXXXXXXXXXXXXXMEEGIIPGGGVALLHASEELEKLPAMNIGEKIGVKLLQHAVKMPLYTIASTAGFQVS-VVEKLLGQENPDLEYDPPRDEYVDAVKSAIVDPPLKLIKNELDDAVS 746 MLG KKV + I G+G + IE R Q+ IE +TSDY+ + L+ERL L+ VA+++VGGAT E ++EGI+PGGGVALL A + + ++ N + G+ ++ A++ P+ IA AG + S VV K+L +++ +D ++YVD V I+D P K+++ L DA S Sbjct: 316 MLGRAKKVVIDKENTTIVNGAGKKADIEARVGQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEIEVKEKKDRVEDALNATRAAVQEGIVPGGGVALLRAKKAVGRITNPNSDVQAGINIVLKALEAPVRQIAENAGVEGSLVVGKILEEKSETFGFDAQSEDYVDMVAKGIID-PAKVVRTALQDASS 510 HSP 2 Score: 21.9422 bits (45), Expect = 2.319e-26 Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 2 Query: 89 KAIMRDIAILTG 124 KA++ DIAILTG Sbjct: 286 KAMLEDIAILTG 297
BLAST of FC924902 vs. ExPASy Swiss-Prot
Match: CH60_SILST (60 kDa chaperonin OS=Silicibacter sp. (strain TM1040) GN=groL PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 2.319e-26 Identity = 67/196 (34.18%), Postives = 109/196 (55.61%), Query Frame = 3 Query: 162 MLGSCKKVKVTNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESXXXXXXXXXXXXXXXXXMEEGIIPGGGVALLHASEELEKLPAMNIGEKIGVKLLQHAVKMPLYTIASTAGFQVSVVE-KLLGQENPDLEYDPPRDEYVDAVKSAIVDPPLKLIKNELDDAVS 746 MLG+ KK+++T +E I G+G + IE R Q+ IE +TSDY+ + L+ER+ L+ VA+++VGG T E ++EG+I GGGVAL+ A + LE L +N + G+ +++ A++ PL IA AG +VV K+ E+ + ++ +EY D ++D P K+ + L+DA S Sbjct: 316 MLGTAKKIQITKDETTIVDGAGEKAEIEARVAQIRAQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEVEVKERKDRVDDALNATRAAVQEGVIVGGGVALVQAGKSLEGLTGVNADQNAGIAIVRRALEAPLRQIAENAGVDGAVVAGKIRESEDKNFGFNAQTEEYGDMFSFGVID-PAKVTRTALEDAAS 510 HSP 2 Score: 22.3274 bits (46), Expect = 2.319e-26 Identity = 9/12 (75.00%), Postives = 12/12 (100.00%), Query Frame = 2 Query: 89 KAIMRDIAILTG 124 KA+++DIAILTG Sbjct: 286 KAMLQDIAILTG 297
BLAST of FC924902 vs. ExPASy Swiss-Prot
Match: CH60_ALTMD (60 kDa chaperonin OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=groL PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 2.319e-26 Identity = 69/194 (35.57%), Postives = 107/194 (55.15%), Query Frame = 3 Query: 165 LGSCKKVKVTNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESXXXXXXXXXXXXXXXXXMEEGIIPGGGVALLHASEELEKLPAMNIGEKIGVKLLQHAVKMPLYTIASTAGFQVSVVEKLLGQENPDLEYDPPRDEYVDAVKSAIVDPPLKLIKNELDDAVS 746 LG+ K+V + + + G+G+Q IE RC Q+ IE S+SDY+ + L+ERL LS VA++KVG AT E +EEG++PGGGVAL+ A+ +L +L N + +GVKL A++ PL I+ +G + SVV + + + Y+ D Y D ++ I+D P K+ ++ L A S Sbjct: 317 LGTAKRVVINKDNTTVVDGNGDQEAIEGRCAQIKGQIEESSSDYDKEKLQERLAKLSGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVPGGGVALVRAAAKLSELTGDNEDQTVGVKLALRAMEAPLRQISINSGAEASVVVNEVKNGDGNYGYNAGNDTYGDMLEMGILD-PTKVTRSALQFASS 509 HSP 2 Score: 22.3274 bits (46), Expect = 2.319e-26 Identity = 9/12 (75.00%), Postives = 12/12 (100.00%), Query Frame = 2 Query: 89 KAIMRDIAILTG 124 KA+++DIAILTG Sbjct: 286 KAMLQDIAILTG 297
BLAST of FC924902 vs. ExPASy Swiss-Prot
Match: CH601_SYNAS (60 kDa chaperonin 1 OS=Syntrophus aciditrophicus (strain SB) GN=groL1 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 2.319e-26 Identity = 69/196 (35.20%), Postives = 114/196 (58.16%), Query Frame = 3 Query: 165 LGSCKKVKVTNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESXXXXXXXXXXXXXXXXXMEEGIIPGGGVALLHASEELEKLPAMNI--GEKIGVKLLQHAVKMPLYTIASTAGFQVSVVEKLLGQENPDLEYDPPRDEYVDAVKSAIVDPPLKLIKNELDDAVS 746 LG+CK++ +T + I G+G+Q IE R +Q+ IE +TSDY+ + L+ERL L VA++KVG AT E +EEGI+PGGGVALL L L M++ E+ G+ +++ AV+ P+ IA+ AGF+ S+V + + + + ++ ++YVD +++ I+D P K+++ L +A S Sbjct: 317 LGTCKRLHITKDNTTIVDGAGSQADIEGRVKQIRTQIEETTSDYDREKLQERLAKLVGGVAVIKVGAATEIEMKEKKARVEDALHATRAAVEEGIVPGGGVALLRT---LPALAGMDLPDDERPGLNIVKRAVEEPMRQIAANAGFEGSIVVEKVKENTGNFGFNADTEKYVDMMEAGIID-PTKVVRFALQNAAS 508 HSP 2 Score: 21.9422 bits (45), Expect = 2.319e-26 Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 2 Query: 89 KAIMRDIAILTG 124 KA++ DIAILTG Sbjct: 286 KAMLEDIAILTG 297 The following BLAST results are available for this feature:
BLAST of FC924902 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924902 ID=FC924902; Name=FC924902; organism=Citrus clementina; type=EST; length=750bpback to top |