FC924902
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC924902 vs. ExPASy Swiss-Prot
Match: CH60_WOLWR (60 kDa chaperonin OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) GN=groL PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.740e-26 Identity = 68/195 (34.87%), Postives = 109/195 (55.90%), Query Frame = 3 Query: 165 LGSCKKVKVTNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESXXXXXXXXXXXXXXXXXMEEGIIPGGGVALLHASEELEKLPAMNIGEKIGVKLLQHAVKMPLYTIASTAGFQVSV-VEKLLGQENPDLEYDPPRDEYVDAVKSAIVDPPLKLIKNELDDAVS 746 LG+ K VK+T + + + + ++ R EQ+ IE STSDY+ + L ERL LS VA+LKVGGAT E +EEGI+PGGGVALL+AS L+KL + E+IG+ +++ + P+ + AG + +V ++ L+ Q + +L Y+ Y +A + ++D P K+++ + AVS Sbjct: 320 LGTAKNVKITKDNTTVVSENSDSDSVKARIEQIKSQIETSTSDYDKEKLRERLAKLSGGVAVLKVGGATEVEVKERRDRVEDALHATRAAIEEGIVPGGGVALLYASSVLDKLKGASDEEQIGINIIKKVLSAPIRRLVKNAGLESAVIIDYLIKQNDKELIYNVEAMNYANAFTAGVID-PAKVVRIAFETAVS 513
BLAST of FC924902 vs. ExPASy Swiss-Prot
Match: CH60_WOLPM (60 kDa chaperonin OS=Wolbachia pipientis wMel GN=groL PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.740e-26 Identity = 68/195 (34.87%), Postives = 109/195 (55.90%), Query Frame = 3 Query: 165 LGSCKKVKVTNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESXXXXXXXXXXXXXXXXXMEEGIIPGGGVALLHASEELEKLPAMNIGEKIGVKLLQHAVKMPLYTIASTAGFQVSV-VEKLLGQENPDLEYDPPRDEYVDAVKSAIVDPPLKLIKNELDDAVS 746 LG+ K VK+T + + + + ++ R EQ+ IE STSDY+ + L ERL LS VA+LKVGGAT E +EEGI+PGGGVALL+AS L+KL + E+IG+ +++ + P+ + AG + +V ++ L+ Q + +L Y+ Y +A + ++D P K+++ + AVS Sbjct: 320 LGTAKNVKITKDNTTVVSENSDSDSVKARIEQIKSQIETSTSDYDKEKLRERLAKLSGGVAVLKVGGATEVEVKERRDRVEDALHATRAAIEEGIVPGGGVALLYASSVLDKLKGASDEEQIGINIIKKVLSAPIRRLVKNAGLESAVIIDYLIKQNDKELIYNVEAMNYANAFTAGVID-PAKVVRIAFETAVS 513
BLAST of FC924902 vs. ExPASy Swiss-Prot
Match: CH60_NOVAD (60 kDa chaperonin OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=groL PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.740e-26 Identity = 70/196 (35.71%), Postives = 111/196 (56.63%), Query Frame = 3 Query: 162 MLGSCKKVKVTNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESXXXXXXXXXXXXXXXXXMEEGIIPGGGVALLHASEELEKLPAMNIGEKIGVKLLQHAVKMPLYTIASTAGFQVSVVEKLLGQENPDLE-YDPPRDEYVDAVKSAIVDPPLKLIKNELDDAVS 746 MLG KKV + + I G+G+ I+ R EQ+ IE++TSDY+ + L+ERL L+ VA++KVGGAT E +EEGI+PGGG ALL+A++ LE L N + G+ +++ A++ P+ IA+ AG +VV L +EN + + ++ D Y + + ++D P K+++ L DA S Sbjct: 316 MLGQAKKVTIDKDNTTIVDGAGSAEEIKARVEQIRAQIEVTTSDYDREKLQERLAKLAGGVAVIKVGGATEVEVKERKDRVDDALHATRAAVEEGIVPGGGTALLYATKALEGLKGANDDQTKGIDIVRRAIQAPIRQIAANAGHDGAVVSGNLLRENDENQGFNAATDTYENLKAAGVID-PTKVVRTALQDAAS 510
BLAST of FC924902 vs. ExPASy Swiss-Prot
Match: CH60_CAUCR (60 kDa chaperonin OS=Caulobacter crescentus GN=groL PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 3.018e-26 Identity = 69/196 (35.20%), Postives = 108/196 (55.10%), Query Frame = 3 Query: 162 MLGSCKKVKVTNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESXXXXXXXXXXXXXXXXXMEEGIIPGGGVALLHASEELEKLPAMNIGEKIGVKLLQHAVKMPLYTIASTAGFQVS-VVEKLLGQENPDLEYDPPRDEYVDAVKSAIVDPPLKLIKNELDDAVS 746 MLG KKV +T ++ I G G + IE R Q+ IE +TSDY+ + L+ERL L+ VA+++VGG+T E +EGI+PGGG ALL AS+ L + N + G+ +++ A++ P+ IA AG + S VV K+L +N ++ ++YVD V ++D P K+++ L +A S Sbjct: 316 MLGRAKKVSITKDDTTIVDGVGEKADIEARIAQIKRQIEDTTSDYDKEKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRVDDALNATRAAADEGIVPGGGTALLKASKALAGVVGDNDDQTAGIAIVRRALQAPIRQIAENAGVEGSIVVGKILENDNSAFGFNAQTEQYVDLVVDGVID-PAKVVRTALQNAAS 510 HSP 2 Score: 21.9422 bits (45), Expect = 3.018e-26 Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 2 Query: 89 KAIMRDIAILTG 124 KA++ DIAILTG Sbjct: 286 KAMLEDIAILTG 297
BLAST of FC924902 vs. ExPASy Swiss-Prot
Match: CH60_CAUCN (60 kDa chaperonin OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=groL PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 3.018e-26 Identity = 69/196 (35.20%), Postives = 108/196 (55.10%), Query Frame = 3 Query: 162 MLGSCKKVKVTNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESXXXXXXXXXXXXXXXXXMEEGIIPGGGVALLHASEELEKLPAMNIGEKIGVKLLQHAVKMPLYTIASTAGFQVS-VVEKLLGQENPDLEYDPPRDEYVDAVKSAIVDPPLKLIKNELDDAVS 746 MLG KKV +T ++ I G G + IE R Q+ IE +TSDY+ + L+ERL L+ VA+++VGG+T E +EGI+PGGG ALL AS+ L + N + G+ +++ A++ P+ IA AG + S VV K+L +N ++ ++YVD V ++D P K+++ L +A S Sbjct: 316 MLGRAKKVSITKDDTTIVDGVGEKADIEARIAQIKRQIEDTTSDYDKEKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRVDDALNATRAAADEGIVPGGGTALLKASKALAGVVGDNDDQTAGIAIVRRALQAPIRQIAENAGVEGSIVVGKILENDNSAFGFNAQTEQYVDLVVDGVID-PAKVVRTALQNAAS 510 HSP 2 Score: 21.9422 bits (45), Expect = 3.018e-26 Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 2 Query: 89 KAIMRDIAILTG 124 KA++ DIAILTG Sbjct: 286 KAMLEDIAILTG 297
BLAST of FC924902 vs. ExPASy Swiss-Prot
Match: CH60_CHRVI (60 kDa chaperonin OS=Chromatium vinosum GN=groL PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 3.018e-26 Identity = 66/194 (34.02%), Postives = 110/194 (56.70%), Query Frame = 3 Query: 165 LGSCKKVKVTNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESXXXXXXXXXXXXXXXXXMEEGIIPGGGVALLHASEELEKLPAMNIGEKIGVKLLQHAVKMPLYTIASTAGFQVSVVEKLLGQENPDLEYDPPRDEYVDAVKSAIVDPPLKLIKNELDDAVS 746 LG+ K+V+V +E I GSG+++ I+ RCEQ+ +E ++SDY+ + L+ERL L+ VA++KVG AT E +EEGI+PGGGVAL+ A ++ L N + +G+ + + A++ PL I + AG + SV+ + + + Y+ EY D V+ I+D P K+ ++ L ++ S Sbjct: 317 LGTAKRVQVGKDETTIIDGSGSEIDIKARCEQIRAQVEETSSDYDREKLQERLAKLAGGVAVIKVGAATEIEMKEKKARVEDALHATRAAVEEGIVPGGGVALVRAIAAVKDLKGANHDQDVGIAIARRAMEEPLRQIVANAGEEPSVILHKVAEGTGNFGYNAANGEYGDMVEMGILD-PTKVTRSALQNSCS 509 HSP 2 Score: 22.3274 bits (46), Expect = 3.018e-26 Identity = 9/12 (75.00%), Postives = 12/12 (100.00%), Query Frame = 2 Query: 89 KAIMRDIAILTG 124 KA+++DIAILTG Sbjct: 286 KAMLQDIAILTG 297
BLAST of FC924902 vs. ExPASy Swiss-Prot
Match: CH60_CLOBO (60 kDa chaperonin OS=Clostridium botulinum GN=groL PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 3.018e-26 Identity = 72/197 (36.55%), Postives = 114/197 (57.87%), Query Frame = 3 Query: 162 MLGSCKKVKVTNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESXXXXXXXXXXXXXXXXXMEEGIIPGGGVALLHASEELEKLPAMNIGEKIGVKLLQHAVKMPLYTIASTAGFQVSV-VEKLL-GQENPDLEYDPPRDEYVDAVKSAIVDPPLKLIKNELDDAVS 746 MLG+ + +KVT I G G++ IEDR Q+ IE +TS+++ + L+ERL ++ VA++KVG AT E +EEGI+ GGG A L A +E+EKL N ++G+ +++ A++ P+ IAS AG + SV ++K++ GQE + +D EYV+ V+ IVD P K+ ++ L +A S Sbjct: 314 MLGTAESIKVTKENTTIVNGKGSKAEIEDRIGQIKRQIEETTSEFDKEKLQERLAKIAGGVAVVKVGAATETELKERKLRIEDALAATKAAVEEGIVAGGGTAYLRAIKEVEKLTDNNSEIRLGIAIIRRALEEPVRQIASNAGLEGSVIIDKIMNGQEG--MGFDALEGEYVNMVQKGIVD-PAKVTRSALQNAAS 507 HSP 2 Score: 21.9422 bits (45), Expect = 3.018e-26 Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 2 Query: 89 KAIMRDIAILTG 124 K ++RDIAILTG Sbjct: 284 KEMLRDIAILTG 295
BLAST of FC924902 vs. ExPASy Swiss-Prot
Match: CH60_PELTS (60 kDa chaperonin OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=groL PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 3.018e-26 Identity = 68/194 (35.05%), Postives = 110/194 (56.70%), Query Frame = 3 Query: 165 LGSCKKVKVTNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESXXXXXXXXXXXXXXXXXMEEGIIPGGGVALLHASEELEKLPAMNIGEKIGVKLLQHAVKMPLYTIASTAGFQVSVVEKLLGQENPDLEYDPPRDEYVDAVKSAIVDPPLKLIKNELDDAVS 746 LG KV+V E II GG+G+ I R Q+ IE +TS+++ + L+ERL L+ VA+++VG AT E +EEGI+PGGGVA + A + L+ L A ++ EK G+ +++ A++ PL IAS AG + SV+ + + +P + ++ E+V+ + + IVD P K+ + L +A S Sbjct: 316 LGRANKVRVKKEETIIVGGAGSTDEITKRVAQIKKQIEETTSEFDKEKLQERLAKLAGGVAVIQVGAATETEMKDKKLRIEDALNATRAAVEEGIVPGGGVAYISALKGLDGLDAGSLDEKTGIDIVRRALEEPLRQIASNAGLEGSVIVEKVKNADPGIGFNALTGEFVNMIDAGIVD-PAKVTRTALQNAAS 508 HSP 2 Score: 22.3274 bits (46), Expect = 3.018e-26 Identity = 9/12 (75.00%), Postives = 12/12 (100.00%), Query Frame = 2 Query: 89 KAIMRDIAILTG 124 KA+++DIAILTG Sbjct: 285 KAMLQDIAILTG 296
BLAST of FC924902 vs. ExPASy Swiss-Prot
Match: HSP60_YEAST (Heat shock protein 60, mitochondrial OS=Saccharomyces cerevisiae GN=HSP60 PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.579e-26 Identity = 70/196 (35.71%), Postives = 113/196 (57.65%), Query Frame = 3 Query: 165 LGSCKKVKVTNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSD-YEIKLLEERLQMLSSRVAILKVGGATTAESXXXXXXXXXXXXXXXXXMEEGIIPGGGVALLHASEELEKLPAMNIGEKIGVKLLQHAVKMPLYTIASTAGFQVSV-VEKLLGQENPDLE--YDPPRDEYVDAVKSAIVDPPLKLIKNELDDA 740 LGSC + VT + +I GSG + I++R EQ+ +I+++T++ YE + L+ERL LS VA+++VGGA+ E +EEGI+PGGG AL+ AS L+++ N +K+GV +++ A+ P I AG + SV + KL+ + D YD + EY D + + I+D P K++++ L DA Sbjct: 338 LGSCDSITVTKEDTVILNGSGPKEAIQERIEQIKGSIDITTTNSYEKEKLQERLAKLSGGVAVIRVGGASEVEVGEKKDRYDDALNATRAAVEEGILPGGGTALVKASRVLDEVVVDNFDQKLGVDIIRKAITRPAKQIIENAGEEGSVIIGKLIDEYGDDFAKGYDASKSEYTDMLATGIID-PFKVVRSGLVDA 532
BLAST of FC924902 vs. ExPASy Swiss-Prot
Match: CH60_LACF3 (60 kDa chaperonin OS=Lactobacillus fermentum (strain IFO 3956 / LMG 18251) GN=groL PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.579e-26 Identity = 70/195 (35.90%), Postives = 110/195 (56.41%), Query Frame = 3 Query: 165 LGSCKKVKVTNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESXXXXXXXXXXXXXXXXXMEEGIIPGGGVALLHASEELEKLPAMNIG-EKIGVKLLQHAVKMPLYTIASTAGFQVSVVEKLLGQENPDLEYDPPRDEYVDAVKSAIVDPPLKLIKNELDDAVS 746 LGS KV +T + I GSGN+ I +R +Q+ AI +TSD++ + L+ERL L+ VA++KVG AT E ++EG +PGGG AL++ L+++ A G E G+K+++ A++ P+ IA AG + SV+ L QE P + Y+ D++ D V + IVD P K+ ++ L +A S Sbjct: 315 LGSANKVTITKDATTIVDGSGNKEAIAERVDQIKKAIAETTSDFDKEKLQERLAKLAGGVAVVKVGAATETELKEKKYRIEDALNATRAAVQEGFVPGGGTALVNVIPALDEVEASATGDEATGIKIVKAALEAPVRQIAENAGLEGSVIVNQLKQEKPGVGYNAADDKFEDMVAAGIVD-PTKVTRSALQNAAS 508 The following BLAST results are available for this feature:
BLAST of FC924902 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924902 ID=FC924902; Name=FC924902; organism=Citrus clementina; type=EST; length=750bpback to top |