FC924906

Overview
NameFC924906
Unique NameFC924906
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length481
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC924906 vs. ExPASy Swiss-Prot
Match: METE_BORA1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bordetella avium (strain 197N) GN=metE PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 5.752e-20
Identity = 44/101 (43.56%), Postives = 68/101 (67.33%), Query Frame = 1
Query:  169 SHVVGYPRMGPKRELKFALESFWDGKSSADELQNVAADLRASIWNQMADAGIKFIPSNTFSYYDQVLDTTAMLGAVPPRYSWNGGE-IGFDVYFSMARGNA 468
            +H +G+PR+G +RELK A+E++W GK +ADEL      LRA+ W + AD+G++F+P   F++YD +L+ T +LGAVP R++    + +  D  F M RG A
Sbjct:    4 THNLGFPRIGAQRELKRAVEAYWAGKQTADELLATGRALRAAHWRRQADSGLRFVPVGDFAWYDHILEWTTLLGAVPARFAQPETQAVSLDTLFRMGRGRA 104          
BLAST of FC924906 vs. ExPASy Swiss-Prot
Match: METE_ECOUT (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli (strain UTI89 / UPEC) GN=metE PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 7.512e-20
Identity = 45/100 (45.00%), Postives = 63/100 (63.00%), Query Frame = 1
Query:  169 SHVVGYPRMGPKRELKFALESFWDGKSSADELQNVAADLRASIWNQMADAGIKFIPSNTFSYYDQVLDTTAMLGAVPPRYSWNGGEIGFDVYFSMARGNA 468
            +H +G+PR+G +RELK A ES+W G S+ +EL  V  +LRA  W+Q   AGI  +P   F++YD VL T+ +LG VP R+  N G +  D  F + RG A
Sbjct:    5 NHTLGFPRVGLRRELKKAQESYWAGNSTREELLAVGRELRARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPQRHQNNDGSVDIDTLFRIGRGRA 104          
BLAST of FC924906 vs. ExPASy Swiss-Prot
Match: METE_ECOK1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O1:K1 / APEC GN=metE PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 7.512e-20
Identity = 45/100 (45.00%), Postives = 63/100 (63.00%), Query Frame = 1
Query:  169 SHVVGYPRMGPKRELKFALESFWDGKSSADELQNVAADLRASIWNQMADAGIKFIPSNTFSYYDQVLDTTAMLGAVPPRYSWNGGEIGFDVYFSMARGNA 468
            +H +G+PR+G +RELK A ES+W G S+ +EL  V  +LRA  W+Q   AGI  +P   F++YD VL T+ +LG VP R+  N G +  D  F + RG A
Sbjct:    5 NHTLGFPRVGLRRELKKAQESYWAGNSTREELLAVGRELRARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPQRHQNNDGSVDIDTLFRIGRGRA 104          
BLAST of FC924906 vs. ExPASy Swiss-Prot
Match: METE_ECO7I (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=metE PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 7.512e-20
Identity = 45/100 (45.00%), Postives = 63/100 (63.00%), Query Frame = 1
Query:  169 SHVVGYPRMGPKRELKFALESFWDGKSSADELQNVAADLRASIWNQMADAGIKFIPSNTFSYYDQVLDTTAMLGAVPPRYSWNGGEIGFDVYFSMARGNA 468
            +H +G+PR+G +RELK A ES+W G S+ +EL  V  +LRA  W+Q   AGI  +P   F++YD VL T+ +LG VP R+  N G +  D  F + RG A
Sbjct:    5 NHTLGFPRVGLRRELKKAQESYWAGNSTREELLAVGRELRARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNNDGSVDIDTLFRIGRGRA 104          
BLAST of FC924906 vs. ExPASy Swiss-Prot
Match: METE_ECO45 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=metE PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 7.512e-20
Identity = 45/100 (45.00%), Postives = 63/100 (63.00%), Query Frame = 1
Query:  169 SHVVGYPRMGPKRELKFALESFWDGKSSADELQNVAADLRASIWNQMADAGIKFIPSNTFSYYDQVLDTTAMLGAVPPRYSWNGGEIGFDVYFSMARGNA 468
            +H +G+PR+G +RELK A ES+W G S+ +EL  V  +LRA  W+Q   AGI  +P   F++YD VL T+ +LG VP R+  N G +  D  F + RG A
Sbjct:    5 NHTLGFPRVGLRRELKKAQESYWAGNSTREELLAVGRELRARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPQRHQNNDGSVDIDTLFRIGRGRA 104          
BLAST of FC924906 vs. ExPASy Swiss-Prot
Match: METE_CYTH3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=metE PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 7.512e-20
Identity = 48/103 (46.60%), Postives = 64/103 (62.14%), Query Frame = 1
Query:  163 MASHVVGYPRMGPKRELKFALESFWDGKSSADELQNVAADLRASIWNQMADAGIKFIPSNTFSYYDQVLDTTAMLGAVPPRYS---WNGGEIGFDVYFSMARG 462
            M +H +GYPR+G  RELK A E +W G  +  +LQ+VA  +R + W    DAG+  IP N FS+YDQVLD + MLG +P R+S           D+YF+MARG
Sbjct:    1 MIAHNLGYPRIGDNRELKKACEQYWSGAITQQKLQDVAKAIRTNNWLTQKDAGLDLIPCNDFSFYDQVLDMSFMLGLIPERFSSLLQKKDLTELDIYFAMARG 103          
BLAST of FC924906 vs. ExPASy Swiss-Prot
Match: METE_SACD2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=metE PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 9.811e-20
Identity = 46/103 (44.66%), Postives = 65/103 (63.11%), Query Frame = 1
Query:  172 HVVGYPRMGPKRELKFALESFWDGKSSADELQNVAADLRASIWNQMADAGIKFIPSNTFSYYDQVLDTTAMLGAVPPRYSWNGGEIGFDVYFSMARGNASVPA 480
            H +G+PR+G KRELKFA E++W G+    +L   A  LRA+ W    DAG++++P   FSYYD VLDT+ ++G +P R +   G+   D YF +ARG A   A
Sbjct:    5 HNLGFPRIGAKRELKFACEAYWRGEIDQTQLDKTAHTLRANHWQTQLDAGVEWLPVGDFSYYDHVLDTSFLVGNIPVR-AQADGQSKLDTYFKVARGTAKEAA 106          
BLAST of FC924906 vs. ExPASy Swiss-Prot
Match: METE_METCA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Methylococcus capsulatus GN=metE PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 9.811e-20
Identity = 44/104 (42.31%), Postives = 65/104 (62.50%), Query Frame = 1
Query:  169 SHVVGYPRMGPKRELKFALESFWDGKSSADELQNVAADLRASIWNQMADAGIKFIPSNTFSYYDQVLDTTAMLGAVPPRYSWNGGEIGFDVYFSMARGNASVPA 480
            +H +G+PR+G  RELK A+E+ W G++   EL     +LR   W   + +GI  +P   F++YDQ+L+ TA+LGAVP R+ +    +  D YF +ARGNA  PA
Sbjct:    4 THSLGFPRIGAGRELKRAVEACWAGRTGPAELAQTGRELRERHWMIQSGSGIDLVPVGDFAWYDQMLNMTALLGAVPRRFGFQADALSLDQYFQLARGNAEQPA 107          
BLAST of FC924906 vs. ExPASy Swiss-Prot
Match: METE_ECOSM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=metE PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 9.811e-20
Identity = 45/100 (45.00%), Postives = 62/100 (62.00%), Query Frame = 1
Query:  169 SHVVGYPRMGPKRELKFALESFWDGKSSADELQNVAADLRASIWNQMADAGIKFIPSNTFSYYDQVLDTTAMLGAVPPRYSWNGGEIGFDVYFSMARGNA 468
            +H +G+PR+G +RELK A ES+W G S+ +EL  V  +LRA  W Q   AGI  +P   F++YD VL T+ +LG VP R+  N G +  D  F + RG A
Sbjct:    5 NHTLGFPRVGLRRELKKAQESYWAGNSTREELLAVGRELRARHWEQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNNDGSVDIDTLFRIGRGRA 104          
BLAST of FC924906 vs. ExPASy Swiss-Prot
Match: METE_BORPE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bordetella pertussis GN=metE PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.673e-19
Identity = 43/100 (43.00%), Postives = 64/100 (64.00%), Query Frame = 1
Query:  172 HVVGYPRMGPKRELKFALESFWDGKSSADELQNVAADLRASIWNQMADAGIKFIPSNTFSYYDQVLDTTAMLGAVPPRYSW-NGGEIGFDVYFSMARGNA 468
            H +G+PR+G +RELK A+E++W G+ +A+ L      LRA+ W + ADAG+ F+P   F++YD +L+ T +LGAVP R+    G  +  D  F M RG A
Sbjct:    5 HNLGFPRIGAQRELKRAVEAYWAGRQTAEALHETGRALRAAHWQRQADAGVAFVPVGDFAWYDHILEWTTLLGAVPARFGHPEGKPVDLDTLFRMGRGRA 104          
The following BLAST results are available for this feature:
BLAST of FC924906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 263
Match NameE-valueIdentityDescription
METE_BORA15.752e-2043.565-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECOUT7.512e-2045.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECOK17.512e-2045.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECO7I7.512e-2045.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECO457.512e-2045.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CYTH37.512e-2046.605-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SACD29.811e-2044.665-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_METCA9.811e-2042.315-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECOSM9.811e-2045.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BORPE1.673e-1943.005-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP1YL18FM1 TF Citrus clementina cDNA clone KN0AAP1YL18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC924906 ID=FC924906; Name=FC924906; organism=Citrus clementina; type=EST; length=481bp
TATCCATATCTTTTTCAAAAACGTCTCCGCTTTTCTCATTCCTTCGCTGC
TCCTTCCGTCGCACTCGTTTCAGGTTCTTCAGATTGTCGCAAATTTCTTT
CTGGGTCTTTTTTTTTTAAGGTTGTGAATTTTGGGTTAATTGTTTTGGGG
TGTTGCAGAGCAATGGCGTCGCATGTAGTGGGGTACCCTCGAATGGGACC
GAAGAGAGAGTTGAAGTTCGCGCTGGAGTCATTCTGGGACGGGAAGAGCA
GCGCCGATGAGTTGCAGAACGTGGCGGCTGATTTGAGAGCATCAATTTGG
AATCAAATGGCTGATGCTGGCATCAAGTTTATCCCCAGCAATACTTTCTC
TTACTACGATCAAGTGTTGGACACCACGGCCATGCTCGGTGCTGTGCCGC
CTAGGTACAGTTGGAACGGTGGCGAGATTGGTTTCGATGTTTATTTCTCT
ATGGCTCGAGGTAACGCCTCTGTTCCCGCCA
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