FC924906

Overview
NameFC924906
Unique NameFC924906
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length481
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1796 contig Ccv1_Contig1796:1..481. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC924906 vs. ExPASy Swiss-Prot
Match: METE_SALPB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=metE PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 4.869e-19
Identity = 44/100 (44.00%), Postives = 61/100 (61.00%), Query Frame = 1 
Query:  169 SHVVGYPRMGPKRELKFALESFWDGKSSADELQNVAADLRASIWNQMADAGIKFIPSNTFSYYDQVLDTTAMLGAVPPRYSWNGGEIGFDVYFSMARGNA 468
            +H +G+PR+G +RELK A ES+W G S+ + L  V  +LRA  W Q   AGI  +P   F++YD VL T+ +LG VP R+  N G +  D  F + RG A
Sbjct:    5 THTLGFPRVGLRRELKKAQESYWAGNSTREALLAVGRELRARHWEQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNNDGSVDIDTLFRIGRGRA 104
[Close]
BLAST of FC924906 vs. ExPASy Swiss-Prot
Match: METE_SALPA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella paratyphi A GN=metE PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 4.869e-19
Identity = 44/100 (44.00%), Postives = 61/100 (61.00%), Query Frame = 1 
Query:  169 SHVVGYPRMGPKRELKFALESFWDGKSSADELQNVAADLRASIWNQMADAGIKFIPSNTFSYYDQVLDTTAMLGAVPPRYSWNGGEIGFDVYFSMARGNA 468
            +H +G+PR+G +RELK A ES+W G S+ + L  V  +LRA  W Q   AGI  +P   F++YD VL T+ +LG VP R+  N G +  D  F + RG A
Sbjct:    5 THTLGFPRVGLRRELKKAQESYWAGNSTREALLAVGRELRARHWEQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNNDGSVDIDTLFRIGRGRA 104
[Close]
BLAST of FC924906 vs. ExPASy Swiss-Prot
Match: METE_SALG2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=metE PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 4.869e-19
Identity = 44/100 (44.00%), Postives = 61/100 (61.00%), Query Frame = 1 
Query:  169 SHVVGYPRMGPKRELKFALESFWDGKSSADELQNVAADLRASIWNQMADAGIKFIPSNTFSYYDQVLDTTAMLGAVPPRYSWNGGEIGFDVYFSMARGNA 468
            +H +G+PR+G +RELK A ES+W G S+ + L  V  +LRA  W Q   AGI  +P   F++YD VL T+ +LG VP R+  N G +  D  F + RG A
Sbjct:    5 THTLGFPRVGLRRELKKAQESYWAGNSTREALLAVGRELRARHWEQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNNDGSVDIDTLFRIGRGRA 104
[Close]
BLAST of FC924906 vs. ExPASy Swiss-Prot
Match: METE_SALEP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella enteritidis PT4 (strain P125109) GN=metE PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 4.869e-19
Identity = 44/100 (44.00%), Postives = 61/100 (61.00%), Query Frame = 1 
Query:  169 SHVVGYPRMGPKRELKFALESFWDGKSSADELQNVAADLRASIWNQMADAGIKFIPSNTFSYYDQVLDTTAMLGAVPPRYSWNGGEIGFDVYFSMARGNA 468
            +H +G+PR+G +RELK A ES+W G S+ + L  V  +LRA  W Q   AGI  +P   F++YD VL T+ +LG VP R+  N G +  D  F + RG A
Sbjct:    5 THTLGFPRVGLRRELKKAQESYWAGNSTREALLAVGRELRARHWEQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNNDGSVDIDTLFRIGRGRA 104
[Close]
BLAST of FC924906 vs. ExPASy Swiss-Prot
Match: METE_SALA4 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella agona (strain SL483) GN=metE PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 4.869e-19
Identity = 44/100 (44.00%), Postives = 61/100 (61.00%), Query Frame = 1 
Query:  169 SHVVGYPRMGPKRELKFALESFWDGKSSADELQNVAADLRASIWNQMADAGIKFIPSNTFSYYDQVLDTTAMLGAVPPRYSWNGGEIGFDVYFSMARGNA 468
            +H +G+PR+G +RELK A ES+W G S+ + L  V  +LRA  W Q   AGI  +P   F++YD VL T+ +LG VP R+  N G +  D  F + RG A
Sbjct:    5 THTLGFPRVGLRRELKKAQESYWAGNSTREALLAVGRELRARHWEQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNNDGSVDIDTLFRIGRGRA 104
[Close]
BLAST of FC924906 vs. ExPASy Swiss-Prot
Match: METE_ENTS8 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=metE PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 4.869e-19
Identity = 45/100 (45.00%), Postives = 62/100 (62.00%), Query Frame = 1 
Query:  169 SHVVGYPRMGPKRELKFALESFWDGKSSADELQNVAADLRASIWNQMADAGIKFIPSNTFSYYDQVLDTTAMLGAVPPRYSWNGGEIGFDVYFSMARGNA 468
            +H +G+PR+G +RELK A ES+W GKS+ +EL  V  +LRA  W Q   AGI  +P   F++YD VL T+ +LG VP R+    G +  D  F + RG A
Sbjct:    5 NHTLGFPRVGLRRELKKAQESYWAGKSTREELLAVGRELRARHWEQQKAAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNADGTVDIDTLFRIGRGRA 104
[Close]
BLAST of FC924906 vs. ExPASy Swiss-Prot
Match: METE_ENT38 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Enterobacter sp. (strain 638) GN=metE PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 4.869e-19
Identity = 43/100 (43.00%), Postives = 63/100 (63.00%), Query Frame = 1 
Query:  169 SHVVGYPRMGPKRELKFALESFWDGKSSADELQNVAADLRASIWNQMADAGIKFIPSNTFSYYDQVLDTTAMLGAVPPRYSWNGGEIGFDVYFSMARGNA 468
            +H +G+PR+G +RELK A ES+W G+S+ ++L  V  +LRA  W+Q   AGI  +P   F++YD VL T+ +LG VP R+    G +  D  F + RG A
Sbjct:    5 NHTLGFPRVGLRRELKKAQESYWAGQSTREDLLAVGRELRARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNKDGSVDIDTLFRLGRGRA 104
[Close]
BLAST of FC924906 vs. ExPASy Swiss-Prot
Match: METE_SALDC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella dublin (strain CT_02021853) GN=metE PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 6.359e-19
Identity = 43/100 (43.00%), Postives = 61/100 (61.00%), Query Frame = 1 
Query:  169 SHVVGYPRMGPKRELKFALESFWDGKSSADELQNVAADLRASIWNQMADAGIKFIPSNTFSYYDQVLDTTAMLGAVPPRYSWNGGEIGFDVYFSMARGNA 468
            +H +G+PR+G +RELK A ES+W G ++ + L  V  +LRA  W Q   AGI  +P   F++YD VL T+ +LG VP R+  N G +  D  F + RG A
Sbjct:    5 THTLGFPRVGLRRELKKAQESYWAGNTTREALLTVGRELRARHWEQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNNDGSVDIDTLFRIGRGRA 104
[Close]
BLAST of FC924906 vs. ExPASy Swiss-Prot
Match: METE_LISMO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Listeria monocytogenes GN=metE PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 6.359e-19
Identity = 46/108 (42.59%), Postives = 66/108 (61.11%), Query Frame = 1 
Query:  157 RAMASHVVGYPRMGPKRELKFALESFWDGKSSADELQNVAADLRASIWNQMADAGIKFIPSNTFSYYDQVLDTTAMLGAVPPRYSWNGGEIGFDVYFSMARGNASVPA 480
            +A++S++ GYPR+G KRE K ALE FW+G  S +EL      LR     +  + GI  IP   FS+YDQVLDT+   G +P R+  +GG++  + YF +ARG +   A
Sbjct:    3 KAISSNL-GYPRLGEKREWKRALEKFWNGAISEEELLAETKALRLHALKKQQEKGIDLIPVGDFSFYDQVLDTSVTFGIIPKRFQHDGGKVSLNTYFDIARGKSDAVA 109
[Close]
BLAST of FC924906 vs. ExPASy Swiss-Prot
Match: METE_KLEP3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Klebsiella pneumoniae (strain 342) GN=metE PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 6.359e-19
Identity = 43/100 (43.00%), Postives = 61/100 (61.00%), Query Frame = 1 
Query:  169 SHVVGYPRMGPKRELKFALESFWDGKSSADELQNVAADLRASIWNQMADAGIKFIPSNTFSYYDQVLDTTAMLGAVPPRYSWNGGEIGFDVYFSMARGNA 468
            +H +G+PR+G +RELK A ES+W G ++ +EL  V  +LRA  W Q   AG+  +P   F++YD VL T+ +LG VP R+    G I  D  F + RG A
Sbjct:    5 NHTLGFPRVGLRRELKKAQESYWAGNATREELLTVGRELRARHWEQQKQAGVDLLPVGDFAWYDHVLTTSLLLGNVPARHQNKDGSIDIDTLFRIGRGRA 104
The following BLAST results are available for this feature:
BLAST of FC924906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 263
Match NameE-valueIdentityDescription
METE_SALPB4.869e-1944.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALPA4.869e-1944.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALG24.869e-1944.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALEP4.869e-1944.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALA44.869e-1944.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ENTS84.869e-1945.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ENT384.869e-1943.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALDC6.359e-1943.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LISMO6.359e-1942.595-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_KLEP36.359e-1943.005-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP1YL18FM1 TF Citrus clementina cDNA clone KN0AAP1YL18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC924906 ID=FC924906; Name=FC924906; organism=Citrus clementina; type=EST; length=481bp
TATCCATATCTTTTTCAAAAACGTCTCCGCTTTTCTCATTCCTTCGCTGC
TCCTTCCGTCGCACTCGTTTCAGGTTCTTCAGATTGTCGCAAATTTCTTT
CTGGGTCTTTTTTTTTTAAGGTTGTGAATTTTGGGTTAATTGTTTTGGGG
TGTTGCAGAGCAATGGCGTCGCATGTAGTGGGGTACCCTCGAATGGGACC
GAAGAGAGAGTTGAAGTTCGCGCTGGAGTCATTCTGGGACGGGAAGAGCA
GCGCCGATGAGTTGCAGAACGTGGCGGCTGATTTGAGAGCATCAATTTGG
AATCAAATGGCTGATGCTGGCATCAAGTTTATCCCCAGCAATACTTTCTC
TTACTACGATCAAGTGTTGGACACCACGGCCATGCTCGGTGCTGTGCCGC
CTAGGTACAGTTGGAACGGTGGCGAGATTGGTTTCGATGTTTATTTCTCT
ATGGCTCGAGGTAACGCCTCTGTTCCCGCCA
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